| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919225
Identifier: 238919225
GI number: 238919225
Start: 1299205
End: 1300242
Strand: Direct
Name: 238919225
Synonym: NT01EI_1308
Alternate gene names: NA
Gene position: 1299205-1300242 (Clockwise)
Preceding gene: 238919224
Following gene: 238919226
Centisome position: 34.08
GC content: 31.79
Gene sequence:
>1038_bases ATGAAAAAAATATTTTTTGTAATTACAAAATCAGAGATTGGCGGTGCGCAAAAGTGGATTGTTGAGCTATCCAATATTTT AAAAGAACAATATGAAATTTTCATTATTACATCTGGAGATGGATGGCTAACATCAAAATTTGATTCATCTCACGTCATTC TTTACCCAGGGTTATTGAATCTTAAGAGTATTTTTTGTTTTTTTAAATTGGCTAATATATTTCGGAAATATAAAGCTGAT ATCGTTATTTCAAGCTCTGCAAATGCTGGGGTTTATGCGAGGTTATCTAAATTCCTATATTCTCATAAAAGCATTTATGT TTCCCATGGATGGTCTTGTCTTTATAATGGCGGAAGATTAAAAAAGATACAGTGCTTGGTTGAAAGATTTCTATCATTAA TTTCAGATAAAATACTATGTGTTTCTGAGAATGATATGAATAATGCTATAAAATTTATAGGGATAAAAGAAAAAAAATTA TTTGTCATTAGAAATGGTGTTAGCCCCCTGAAAAAAAAGAATGTTATTAATGTGAGAAAGAAAGTCCTCTTTGTTGGAAG AATGATTCATCCCAAAAGACCCGATTTGTTCGTCGCTGTAGCAGACAGTTTTCCTGATGTGGATTTTTATCTGGTAGGTG ATGGTCCTCTAAAACAAAGGTTAGAGACATCCTGTCAACATAATAATGTTTATTTTCTTGGCGAGATTAATGGGTTTGAC AGTTTTCAGTGCTATGATATTTTTGTACTTTGTTCTGATAGTGAAGGTTTACCTATGTCAGCATTGGAAGCCGCTTCTTC TGGGGTGCCTATTTTATTAAGTGATGTAGGTGGTTGTTCTGAACTAATTACTTTAATGAATAATGGATGTAGTAATGGCG AGTTATTTTCTAATGATATATCTTCGTTAAGATGTAAGTTAGGTGCTGTTTTGCTTGAATATGATAAATATTTTTCATCT GCTCAGGTTGTAAGCGGTTGCTTTGATATAAACAATCTTGCTGAAAAATATATTGAATTAATTGAGGGTGATAAATGA
Upstream 100 bases:
>100_bases AAAGCGAAAAACAAAGACCATTGTGAGAACCAATTTTCCATTGGGGCTATAATTAATAATTGGTATGCCATTTATAATGG GATAAGATCGAAATTATAAT
Downstream 100 bases:
>100_bases AATTAGCAATCATTGGCGGTTCTGGTTTTATCGGTACGCGTCTGGCTACGCAGTTAAAAAATAATAATGTTGAATTTACT ATTGTTGATAAACGAAACAG
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase Group 1 Family; Galactosyltransferase WbgM; Glycosyl Transferase Family Protein; Glycosyltransferase Protein; Group 1 Glycosyl Transferase; A-Glycosyltransferase; Group 1 Family Glycosyltransferase; WclR Protein; Exopolysaccharide Biosynthesis Protein; Glycosyltransferase Group 1 Family; Second Mannosyl Transferase; Lipopolysaccharide Biosynthesis Protein; Exopolysaccharide Biosynthesis Protein Glycosyltransferase; Glycosyl Transferase Group 1/2 Family Protein; LPS Biosynthesis Related Glycosyltransferase; Glycosyltransferase Involved Exopolysaccharide Synthesis; Galactosyl Transferase; Hexosyltransferase; Glycosyltransferase Group 1 Family Protein
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS AQVVSGCFDINNLAEKYIELIEGDK
Sequences:
>Translated_345_residues MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS AQVVSGCFDINNLAEKYIELIEGDK >Mature_345_residues MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLNLKSIFCFFKLANIFRKYKAD IVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRLKKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKL FVIRNGVSPLKKKNVINVRKKVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDISSLRCKLGAVLLEYDKYFSS AQVVSGCFDINNLAEKYIELIEGDK
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38608; Mature: 38608
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLN CCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEECCHHH LKSIFCFFKLANIFRKYKADIVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRL HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEECCCCH KKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKLFVIRNGVSPLKKKNVINVRK HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH KVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDI CEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHH SSLRCKLGAVLLEYDKYFSSAQVVSGCFDINNLAEKYIELIEGDK HHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKIFFVITKSEIGGAQKWIVELSNILKEQYEIFIITSGDGWLTSKFDSSHVILYPGLLN CCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEEEECCCCEEEECCCCCEEEEECCHHH LKSIFCFFKLANIFRKYKADIVISSSANAGVYARLSKFLYSHKSIYVSHGWSCLYNGGRL HHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHCCEEEEECCCEEEECCCCH KKIQCLVERFLSLISDKILCVSENDMNNAIKFIGIKEKKLFVIRNGVSPLKKKNVINVRK HHHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEEECCCEEEEEECCCCCHHHCCHHHHHH KVLFVGRMIHPKRPDLFVAVADSFPDVDFYLVGDGPLKQRLETSCQHNNVYFLGEINGFD HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCC SFQCYDIFVLCSDSEGLPMSALEAASSGVPILLSDVGGCSELITLMNNGCSNGELFSNDI CEEEEEEEEEEECCCCCCHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCCCCHHHHH SSLRCKLGAVLLEYDKYFSSAQVVSGCFDINNLAEKYIELIEGDK HHHHHHHHHHHHHHHHHHCHHHHHHHHHCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA