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The map label for this gene is ypjH [H]

Identifier: 238919224

GI number: 238919224

Start: 1298103

End: 1299203

Strand: Direct

Name: ypjH [H]

Synonym: NT01EI_1307

Alternate gene names: 238919224

Gene position: 1298103-1299203 (Clockwise)

Preceding gene: 238919223

Following gene: 238919225

Centisome position: 34.05

GC content: 34.33

Gene sequence:

>1101_bases
ATGAAAATACTATATGTTATTACAGGGTTAGGGTTGGGTGGGGCAGAGAAACAACTTTCTTTATTAGCAGATAATTTTAC
TGCTAGAGGTGAGCAAGTTTCAATCGTTTATTTAACCGGAGAGGTACTGGTTAAGCCGAAAAACAAAAATATAAAAATAT
ATAATCTAGGTATAGATAAAAGTTTTTCTTCACTAATCAAGGGGATCTGGAAACTAAAATCAATAATATCTGACGTTAGG
CCTGATGTGATCCATTCGCATATGTATCATGCTAATATCTTAGCTCGTATTTCATGTTGCCTTTCCCTATTTTCATCTAG
GTTAGTGTGCTCGGCTCATAATAAAAACGAGGGGGGGCGAGTTAGGATGATTATTTATCGAATGACTGATTTTCTATGTG
CTAAAACAACAAATGTTAGTCAGGAAGCTCTGGATGAGTTTATAACTAAGAAAGCATTTAGAAAAAGAAAGTCTAGTTTA
GTCTATAATGGAATAGATCTTTCTATCTTTAAAAAGAAAAGCACTAATATTCAAAATATTAAAAATAAATTAGGAATAAA
TTTTGATGAGAAGGTGATATTTTGTGCAGGTAGATTAACAGAAGCAAAAGACTATCCTAATTTGATCCTCGCAATATCTA
AGATGCACCAGAAAAAATGTAAGATTATCATTGCTGGTGATGGTCCCATGCGTAGTGATATAGAGAGACTAATTGATCGT
TGCCATCTATCGCATCGGATTTTACTTATTGGGATAATTGATAATATTTCTGATTACTATAATTTATCTGATCTATTTGT
ATTGCCATCTCGCTGGGAGGGTTTTGGGTTAGTTGTCGCAGAGGCTATGGCATGTGAATGCCCAGTGATAGCAACTGATG
CAGGGGGTGTTGCTGAGGTTCTTTCTAATGCTGATTGGCTGGTTCCAATTGCTGATAGCAGTAAATTAGCTGAGAAAATT
GATGAGTTTTTTTTGCTTGACTCTTCAGAAGTTAAAGATATCAAAGCGAAAAACAAAGACCATTGTGAGAACCAATTTTC
CATTGGGGCTATAATTAATAATTGGTATGCCATTTATAATGGGATAAGATCGAAATTATAA

Upstream 100 bases:

>100_bases
GAAAAACTTATGTTAATCATGAATCACATATCTCATTCTTTTTAAGAGTTATGAGAGGGGTTGTAAGGAAAGTATATTTA
TCTATCTCTTGGAAAAGTTT

Downstream 100 bases:

>100_bases
TATGAAAAAAATATTTTTTGTAATTACAAAATCAGAGATTGGCGGTGCGCAAAAGTGGATTGTTGAGCTATCCAATATTT
TAAAAGAACAATATGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MKILYVITGLGLGGAEKQLSLLADNFTARGEQVSIVYLTGEVLVKPKNKNIKIYNLGIDKSFSSLIKGIWKLKSIISDVR
PDVIHSHMYHANILARISCCLSLFSSRLVCSAHNKNEGGRVRMIIYRMTDFLCAKTTNVSQEALDEFITKKAFRKRKSSL
VYNGIDLSIFKKKSTNIQNIKNKLGINFDEKVIFCAGRLTEAKDYPNLILAISKMHQKKCKIIIAGDGPMRSDIERLIDR
CHLSHRILLIGIIDNISDYYNLSDLFVLPSRWEGFGLVVAEAMACECPVIATDAGGVAEVLSNADWLVPIADSSKLAEKI
DEFFLLDSSEVKDIKAKNKDHCENQFSIGAIINNWYAIYNGIRSKL

Sequences:

>Translated_366_residues
MKILYVITGLGLGGAEKQLSLLADNFTARGEQVSIVYLTGEVLVKPKNKNIKIYNLGIDKSFSSLIKGIWKLKSIISDVR
PDVIHSHMYHANILARISCCLSLFSSRLVCSAHNKNEGGRVRMIIYRMTDFLCAKTTNVSQEALDEFITKKAFRKRKSSL
VYNGIDLSIFKKKSTNIQNIKNKLGINFDEKVIFCAGRLTEAKDYPNLILAISKMHQKKCKIIIAGDGPMRSDIERLIDR
CHLSHRILLIGIIDNISDYYNLSDLFVLPSRWEGFGLVVAEAMACECPVIATDAGGVAEVLSNADWLVPIADSSKLAEKI
DEFFLLDSSEVKDIKAKNKDHCENQFSIGAIINNWYAIYNGIRSKL
>Mature_366_residues
MKILYVITGLGLGGAEKQLSLLADNFTARGEQVSIVYLTGEVLVKPKNKNIKIYNLGIDKSFSSLIKGIWKLKSIISDVR
PDVIHSHMYHANILARISCCLSLFSSRLVCSAHNKNEGGRVRMIIYRMTDFLCAKTTNVSQEALDEFITKKAFRKRKSSL
VYNGIDLSIFKKKSTNIQNIKNKLGINFDEKVIFCAGRLTEAKDYPNLILAISKMHQKKCKIIIAGDGPMRSDIERLIDR
CHLSHRILLIGIIDNISDYYNLSDLFVLPSRWEGFGLVVAEAMACECPVIATDAGGVAEVLSNADWLVPIADSSKLAEKI
DEFFLLDSSEVKDIKAKNKDHCENQFSIGAIINNWYAIYNGIRSKL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI17532709, Length=351, Percent_Identity=21.0826210826211, Blast_Score=70, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI9755344, Length=309, Percent_Identity=22.3300970873786, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24654571, Length=330, Percent_Identity=20, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40986; Mature: 40986

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILYVITGLGLGGAEKQLSLLADNFTARGEQVSIVYLTGEVLVKPKNKNIKIYNLGIDK
CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCH
SFSSLIKGIWKLKSIISDVRPDVIHSHMYHANILARISCCLSLFSSRLVCSAHNKNEGGR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCE
VRMIIYRMTDFLCAKTTNVSQEALDEFITKKAFRKRKSSLVYNGIDLSIFKKKSTNIQNI
EEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEECCCEEEEEECCCCCHHHH
KNKLGINFDEKVIFCAGRLTEAKDYPNLILAISKMHQKKCKIIIAGDGPMRSDIERLIDR
HHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
CHLSHRILLIGIIDNISDYYNLSDLFVLPSRWEGFGLVVAEAMACECPVIATDAGGVAEV
HCCCCEEEEEEEEHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCHHHH
LSNADWLVPIADSSKLAEKIDEFFLLDSSEVKDIKAKNKDHCENQFSIGAIINNWYAIYN
HCCCCEEEEECCCHHHHHHHHHHEECCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH
GIRSKL
HHHHCC
>Mature Secondary Structure
MKILYVITGLGLGGAEKQLSLLADNFTARGEQVSIVYLTGEVLVKPKNKNIKIYNLGIDK
CEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCEEEEEECCCH
SFSSLIKGIWKLKSIISDVRPDVIHSHMYHANILARISCCLSLFSSRLVCSAHNKNEGGR
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCE
VRMIIYRMTDFLCAKTTNVSQEALDEFITKKAFRKRKSSLVYNGIDLSIFKKKSTNIQNI
EEEEEEEHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCEEECCCEEEEEECCCCCHHHH
KNKLGINFDEKVIFCAGRLTEAKDYPNLILAISKMHQKKCKIIIAGDGPMRSDIERLIDR
HHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH
CHLSHRILLIGIIDNISDYYNLSDLFVLPSRWEGFGLVVAEAMACECPVIATDAGGVAEV
HCCCCEEEEEEEEHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCHHHH
LSNADWLVPIADSSKLAEKIDEFFLLDSSEVKDIKAKNKDHCENQFSIGAIINNWYAIYN
HCCCCEEEEECCCHHHHHHHHHHEECCCCCHHHHHCCCCCCCCCCEEHHHHHHHHHHHHH
GIRSKL
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]