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The map label for this gene is 238919223

Identifier: 238919223

GI number: 238919223

Start: 1297321

End: 1298106

Strand: Direct

Name: 238919223

Synonym: NT01EI_1306

Alternate gene names: NA

Gene position: 1297321-1298106 (Clockwise)

Preceding gene: 238919222

Following gene: 238919224

Centisome position: 34.03

GC content: 31.81

Gene sequence:

>786_bases
ATGAAAACTTTTATTATATCCTTGAAAGATGAAGTCGCTCGTAGAAATAGCATTAGCGATAGGTTACATCATCATGACTT
CGAGTTTTTTGATGCGGTTGATTTGAGAGTGGCATCAGATGATGTGCTTTCAGCGGTAAAATGTAAAAATATTAATTATA
AACATCCAGCAATTAGAGAGCATATGACAAAAGGAGAGATTGGATGTGCTTTAAGTCATATGCAGCTATATAAAAAAATT
GTTGATGATAATTTAGCATTTGCTAGAGTAATTGAAGATGATGCGGTTATTTTAAATCATGATGAAAAGATTCTTAATGA
TTTCATATTGGCTTTGGAAATGAAGAATATAGACTGGGATATCATGTTGCTGGGATATTCTAAGTTAAAAGCATGTGATT
CTTTTGGTTTTTATCTTAAGGAGCCAATTAAAAATATCGTAAAGAGCGGTGCATACTCTTTAGGAATACCATTTAGGAAC
TGGACTTGTGGAACGGTAGGATATCTGGTTTCTCAAAGTGGTGCAAAGAAAATGATTAATAATGCTGCCTTTGGTAAGGT
ATGCACTGTTGCTGATGATTGGCTTTTTTTTGAAAAAAATTATAATTTAAAAATACTTCATATAAGACCTCTAATTGTAT
TGGAGGACTTTGAGTCGTATGAAAGTTCAATAGAGACAGATAGAAAAACTTATGTTAATCATGAATCACATATCTCATTC
TTTTTAAGAGTTATGAGAGGGGTTGTAAGGAAAGTATATTTATCTATCTCTTGGAAAAGTTTATGA

Upstream 100 bases:

>100_bases
ATAGTATTGAAAGAGTGGCGAGATAATGAATGTTGTTTTATGTCGATTGCGTTATAATATTGAGTGTTTTACATCCACAT
TATAAGAATCCATTGAACCT

Downstream 100 bases:

>100_bases
AAATACTATATGTTATTACAGGGTTAGGGTTGGGTGGGGCAGAGAAACAACTTTCTTTATTAGCAGATAATTTTACTGCT
AGAGGTGAGCAAGTTTCAAT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKTFIISLKDEVARRNSISDRLHHHDFEFFDAVDLRVASDDVLSAVKCKNINYKHPAIREHMTKGEIGCALSHMQLYKKI
VDDNLAFARVIEDDAVILNHDEKILNDFILALEMKNIDWDIMLLGYSKLKACDSFGFYLKEPIKNIVKSGAYSLGIPFRN
WTCGTVGYLVSQSGAKKMINNAAFGKVCTVADDWLFFEKNYNLKILHIRPLIVLEDFESYESSIETDRKTYVNHESHISF
FLRVMRGVVRKVYLSISWKSL

Sequences:

>Translated_261_residues
MKTFIISLKDEVARRNSISDRLHHHDFEFFDAVDLRVASDDVLSAVKCKNINYKHPAIREHMTKGEIGCALSHMQLYKKI
VDDNLAFARVIEDDAVILNHDEKILNDFILALEMKNIDWDIMLLGYSKLKACDSFGFYLKEPIKNIVKSGAYSLGIPFRN
WTCGTVGYLVSQSGAKKMINNAAFGKVCTVADDWLFFEKNYNLKILHIRPLIVLEDFESYESSIETDRKTYVNHESHISF
FLRVMRGVVRKVYLSISWKSL
>Mature_261_residues
MKTFIISLKDEVARRNSISDRLHHHDFEFFDAVDLRVASDDVLSAVKCKNINYKHPAIREHMTKGEIGCALSHMQLYKKI
VDDNLAFARVIEDDAVILNHDEKILNDFILALEMKNIDWDIMLLGYSKLKACDSFGFYLKEPIKNIVKSGAYSLGIPFRN
WTCGTVGYLVSQSGAKKMINNAAFGKVCTVADDWLFFEKNYNLKILHIRPLIVLEDFESYESSIETDRKTYVNHESHISF
FLRVMRGVVRKVYLSISWKSL

Specific function: Unknown

COG id: COG3306

COG function: function code M; Glycosyltransferase involved in LPS biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 25 family [H]

Homologues:

Organism=Homo sapiens, GI16506820, Length=161, Percent_Identity=29.1925465838509, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI31377697, Length=247, Percent_Identity=23.4817813765182, Blast_Score=64, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002654 [H]

Pfam domain/function: PF01755 Glyco_transf_25 [H]

EC number: NA

Molecular weight: Translated: 30111; Mature: 30111

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFIISLKDEVARRNSISDRLHHHDFEFFDAVDLRVASDDVLSAVKCKNINYKHPAIRE
CCEEEEECHHHHHHHCCHHHHHHHCCCHHHHHEEEEECCHHHHHHHHHCCCCCCCCHHHH
HMTKGEIGCALSHMQLYKKIVDDNLAFARVIEDDAVILNHDEKILNDFILALEMKNIDWD
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHEEECCCCEE
IMLLGYSKLKACDSFGFYLKEPIKNIVKSGAYSLGIPFRNWTCGTVGYLVSQSGAKKMIN
EEEECCHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHH
NAAFGKVCTVADDWLFFEKNYNLKILHIRPLIVLEDFESYESSIETDRKTYVNHESHISF
CCCCCCEEEEECCEEEEECCCCEEEEEEEEEEEEECHHHHHHHHHCCHHHHCCCHHHHHH
FLRVMRGVVRKVYLSISWKSL
HHHHHHHHHHHHHHEEEECCC
>Mature Secondary Structure
MKTFIISLKDEVARRNSISDRLHHHDFEFFDAVDLRVASDDVLSAVKCKNINYKHPAIRE
CCEEEEECHHHHHHHCCHHHHHHHCCCHHHHHEEEEECCHHHHHHHHHCCCCCCCCHHHH
HMTKGEIGCALSHMQLYKKIVDDNLAFARVIEDDAVILNHDEKILNDFILALEMKNIDWD
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCHHHHHHHHHHEEECCCCEE
IMLLGYSKLKACDSFGFYLKEPIKNIVKSGAYSLGIPFRNWTCGTVGYLVSQSGAKKMIN
EEEECCHHHHHHHHCCHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHCCCCHHHHHH
NAAFGKVCTVADDWLFFEKNYNLKILHIRPLIVLEDFESYESSIETDRKTYVNHESHISF
CCCCCCEEEEECCEEEEECCCCEEEEEEEEEEEEECHHHHHHHHHCCHHHHCCCHHHHHH
FLRVMRGVVRKVYLSISWKSL
HHHHHHHHHHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]