Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is dinG [H]

Identifier: 238919205

GI number: 238919205

Start: 1273544

End: 1275784

Strand: Direct

Name: dinG [H]

Synonym: NT01EI_1288

Alternate gene names: 238919205

Gene position: 1273544-1275784 (Clockwise)

Preceding gene: 238919204

Following gene: 238919206

Centisome position: 33.41

GC content: 62.12

Gene sequence:

>2241_bases
GTGGGGCGGGTGGCTGATTTTGTCCGCCCGCTGTGCGACAATAGCGCGCCATGTTTCCCGCAGCGAGTATCAATGACCCT
TTCCAGCGCACTCAAAACCCAGATCTCCCAGTGGTATAAGGCCCTGGCGCAGCAAATTCCCGATTTTGTCACCCGTCCGC
AGCAGCGGAAAATGATCGCTGAAGTCGCCCGGGCACTGAGCGGCATTGACGCCCGTCATTTGGTGATCGAGGCGCCGACC
GGCGTCGGTAAAACCCTCTCCTATCTGTTGCCCGGCATTGCCATCAGTCGGGCACAGCAGAAGCCGCTGGTGGTGAGTAC
CGCCAACGTAGCGTTACAGGATCAGATTTATACCCAGGATCTGCCGCTGCTGCGGCGAATTATCCCCGATCTGACTTTTA
CCGCCGCCTTTGGCCGCGGTCGCTACGTGTGTCCGCGTAATTTGGCGGCGCTCTCCGAGCATCAGGATGGGCAGGGATCC
CTGCTGCTGTTTATCGATGATGCGCTGCAGCCGGGCAGCGAGGAGGATCGGGCGCAGTGCCGCCGTCTGCAGGAAGAGCT
GGAGAGCCGCCGCTGGGATGGGTTGCGCGACCATCTGCATGACAATCTGGATGATGGGCTATGGGCCAAGATGAGCACCG
ATCGGGCCAGCTGCCTGAACCGCAGCTGTTCCCATTTTCGCCACTGCCCGTTTTTTCTGGCGCGGCGCGAAATTGAAAGC
GCCGATGTGGTGGTAGCCAACCATGCGCTGGTGATGGCGGCGCTGGAGAGCGAGTCGGTGCTGCCGCCGCCGAAGGATCT
GTTGCTGGTGCTGGATGAGGGGCACCATCTGCCCGATGTCGCCCGTGATGCGTTGGAGATGGAGGGTGAGATCACCGCTC
TGTTTGTGCAGGGGCAGATCGATATGATCGTACGCCATATCGAACAGTGCCAGGCACAGTATCAGCCCAAGAATCCCCCG
CGCTTGCTGGGCAGCGGGCGCCTGCAGGCGCACACGGCGGAGCTGCGTCAGCTGCTGACAGATTTCGATCGTGCTGCCGC
CGGGCTGCTGGCCGGTGAGGAGCAGCACCGCTTTATTCTGGGCCAGCTGCCCGAAGCGCTGGGTGAGCTGGCACAGCGCC
TGTATAAGCTGTGCGATGGTCTACGCGGCCTGAGCGAGTTTATGATGAACGACCTGCAGGAGAAGACCGGGACGCACGAT
GCGCTACGGGTACAGCGCGCGCTGCTACAGATGAGCCGGGCGTTCAGCTACCTAGAGGCGCTGAGCAAGCTGTGGCGCCT
GGCGGCACTGGATCAGGCCTCCAATGCACCGATCTCCAAATGGCTGACGCAAGAGCTCAGCGATGGCGTACACCACCGCT
ACCTGCACTGCGTCGGGATCCGGGTATGCGATCAGCTGGAGCGCTTACTGTGGCGGCGTATTCCCCACGCGGTGATCACT
TCGGCGACCCTGCGCTCCCTGAACCGCTTTGACCGCATCAGCGAGCTCTCTGGCCTGAACAGTCAGGCCGGCGATCGCTT
TGTGGTGCTGGACTCGCCATTTGACCATGTACACCAAGGGTGTCTGGTGATCCCGCAGATGACGCTGGAGCCTACGTTGG
CGCAGGAGGGAGAGCATTTACGTCAGATGGCTCACCTCTTCCGTGCGGCCTGGCTGCGTGGTGAACACACCGGTATGCTG
GTGTTGTTTGCCAGCCAGCGGGCGATGCAGACTTTTTTAGGTTTTGTCCCGGATCTGCGCCTGGGGCTGCTGGTGCAGGG
GGACCGTCCCCGCTATCGCCTGGTGGAAGAGCACTGTCGCCGGGTGCACGCAGGGACACAGAGCGCGCTGGTCGGGCTGC
AGTCGTTTGCCGAGGGGCTGGATCTGAAGGGTGAGTTGTTGACCCAGGTGCATATTCATAAGGTAGCCTTTCCTCCGGTA
GACAGCCCGGTGATCCTGACGGAGGGAGAGTGGCTGAAGTCGCATAACCGCTACCCCTTTGAGGTGCAAAGCCTGCCTGG
TGCCTCTTTTACCCTGATCCAGCAGGTAGGGCGGCTGATCCGCAGCCACGCCTGCCGCGGCGAGATCGTCATCTACGATC
GCCGCCTGCTGAGTAAACCGTATGGTAGCCGTCTGCTGGCCGCGCTGCCGGTGTTTCCTATCCTGCAGCCGCCGTTGCCG
GAGGGGGAATTGCCTGCCTGGCCACAGCCCGTGGCGCAAAAGCGGGCCTCTCGCCACTCTGCCTCACGCCGTCGCCGCTA
A

Upstream 100 bases:

>100_bases
ATGGCTATCTGTGGCTGAATATGCAGCTGGCGATGCAGCTGGATGAGCTGCGCGATCTGTTGAGCAACGTATTGCGCCGC
TGATCGGCGCCGGGACAACG

Downstream 100 bases:

>100_bases
CGCAGCAGAGCGGATAGCCGCAATTATCATACTAAATCATTGCCTGCGATAAAATTCTTATGTAGAATCCAAAAAGTATA
ACCGTTTGAAATAATTATAT

Product: ATP-dependent DNA helicase DinG

Products: NA

Alternate protein names: DNA-damage-inducible protein G [H]

Number of amino acids: Translated: 746; Mature: 745

Protein sequence:

>746_residues
MGRVADFVRPLCDNSAPCFPQRVSMTLSSALKTQISQWYKALAQQIPDFVTRPQQRKMIAEVARALSGIDARHLVIEAPT
GVGKTLSYLLPGIAISRAQQKPLVVSTANVALQDQIYTQDLPLLRRIIPDLTFTAAFGRGRYVCPRNLAALSEHQDGQGS
LLLFIDDALQPGSEEDRAQCRRLQEELESRRWDGLRDHLHDNLDDGLWAKMSTDRASCLNRSCSHFRHCPFFLARREIES
ADVVVANHALVMAALESESVLPPPKDLLLVLDEGHHLPDVARDALEMEGEITALFVQGQIDMIVRHIEQCQAQYQPKNPP
RLLGSGRLQAHTAELRQLLTDFDRAAAGLLAGEEQHRFILGQLPEALGELAQRLYKLCDGLRGLSEFMMNDLQEKTGTHD
ALRVQRALLQMSRAFSYLEALSKLWRLAALDQASNAPISKWLTQELSDGVHHRYLHCVGIRVCDQLERLLWRRIPHAVIT
SATLRSLNRFDRISELSGLNSQAGDRFVVLDSPFDHVHQGCLVIPQMTLEPTLAQEGEHLRQMAHLFRAAWLRGEHTGML
VLFASQRAMQTFLGFVPDLRLGLLVQGDRPRYRLVEEHCRRVHAGTQSALVGLQSFAEGLDLKGELLTQVHIHKVAFPPV
DSPVILTEGEWLKSHNRYPFEVQSLPGASFTLIQQVGRLIRSHACRGEIVIYDRRLLSKPYGSRLLAALPVFPILQPPLP
EGELPAWPQPVAQKRASRHSASRRRR

Sequences:

>Translated_746_residues
MGRVADFVRPLCDNSAPCFPQRVSMTLSSALKTQISQWYKALAQQIPDFVTRPQQRKMIAEVARALSGIDARHLVIEAPT
GVGKTLSYLLPGIAISRAQQKPLVVSTANVALQDQIYTQDLPLLRRIIPDLTFTAAFGRGRYVCPRNLAALSEHQDGQGS
LLLFIDDALQPGSEEDRAQCRRLQEELESRRWDGLRDHLHDNLDDGLWAKMSTDRASCLNRSCSHFRHCPFFLARREIES
ADVVVANHALVMAALESESVLPPPKDLLLVLDEGHHLPDVARDALEMEGEITALFVQGQIDMIVRHIEQCQAQYQPKNPP
RLLGSGRLQAHTAELRQLLTDFDRAAAGLLAGEEQHRFILGQLPEALGELAQRLYKLCDGLRGLSEFMMNDLQEKTGTHD
ALRVQRALLQMSRAFSYLEALSKLWRLAALDQASNAPISKWLTQELSDGVHHRYLHCVGIRVCDQLERLLWRRIPHAVIT
SATLRSLNRFDRISELSGLNSQAGDRFVVLDSPFDHVHQGCLVIPQMTLEPTLAQEGEHLRQMAHLFRAAWLRGEHTGML
VLFASQRAMQTFLGFVPDLRLGLLVQGDRPRYRLVEEHCRRVHAGTQSALVGLQSFAEGLDLKGELLTQVHIHKVAFPPV
DSPVILTEGEWLKSHNRYPFEVQSLPGASFTLIQQVGRLIRSHACRGEIVIYDRRLLSKPYGSRLLAALPVFPILQPPLP
EGELPAWPQPVAQKRASRHSASRRRR
>Mature_745_residues
GRVADFVRPLCDNSAPCFPQRVSMTLSSALKTQISQWYKALAQQIPDFVTRPQQRKMIAEVARALSGIDARHLVIEAPTG
VGKTLSYLLPGIAISRAQQKPLVVSTANVALQDQIYTQDLPLLRRIIPDLTFTAAFGRGRYVCPRNLAALSEHQDGQGSL
LLFIDDALQPGSEEDRAQCRRLQEELESRRWDGLRDHLHDNLDDGLWAKMSTDRASCLNRSCSHFRHCPFFLARREIESA
DVVVANHALVMAALESESVLPPPKDLLLVLDEGHHLPDVARDALEMEGEITALFVQGQIDMIVRHIEQCQAQYQPKNPPR
LLGSGRLQAHTAELRQLLTDFDRAAAGLLAGEEQHRFILGQLPEALGELAQRLYKLCDGLRGLSEFMMNDLQEKTGTHDA
LRVQRALLQMSRAFSYLEALSKLWRLAALDQASNAPISKWLTQELSDGVHHRYLHCVGIRVCDQLERLLWRRIPHAVITS
ATLRSLNRFDRISELSGLNSQAGDRFVVLDSPFDHVHQGCLVIPQMTLEPTLAQEGEHLRQMAHLFRAAWLRGEHTGMLV
LFASQRAMQTFLGFVPDLRLGLLVQGDRPRYRLVEEHCRRVHAGTQSALVGLQSFAEGLDLKGELLTQVHIHKVAFPPVD
SPVILTEGEWLKSHNRYPFEVQSLPGASFTLIQQVGRLIRSHACRGEIVIYDRRLLSKPYGSRLLAALPVFPILQPPLPE
GELPAWPQPVAQKRASRHSASRRRR

Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1787018, Length=724, Percent_Identity=62.4309392265193, Blast_Score=931, Evalue=0.0,
Organism=Escherichia coli, GI1788110, Length=685, Percent_Identity=28.9051094890511, Blast_Score=178, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR011545
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 83874; Mature: 83743

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVADFVRPLCDNSAPCFPQRVSMTLSSALKTQISQWYKALAQQIPDFVTRPQQRKMIA
CCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHH
EVARALSGIDARHLVIEAPTGVGKTLSYLLPGIAISRAQQKPLVVSTANVALQDQIYTQD
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHCC
LPLLRRIIPDLTFTAAFGRGRYVCPRNLAALSEHQDGQGSLLLFIDDALQPGSEEDRAQC
HHHHHHHHCCCCEEHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
RRLQEELESRRWDGLRDHLHDNLDDGLWAKMSTDRASCLNRSCSHFRHCPFFLARREIES
HHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
ADVVVANHALVMAALESESVLPPPKDLLLVLDEGHHLPDVARDALEMEGEITALFVQGQI
CCEEEECHHHEEEECCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHH
DMIVRHIEQCQAQYQPKNPPRLLGSGRLQAHTAELRQLLTDFDRAAAGLLAGEEQHRFIL
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GQLPEALGELAQRLYKLCDGLRGLSEFMMNDLQEKTGTHDALRVQRALLQMSRAFSYLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSKLWRLAALDQASNAPISKWLTQELSDGVHHRYLHCVGIRVCDQLERLLWRRIPHAVIT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SATLRSLNRFDRISELSGLNSQAGDRFVVLDSPFDHVHQGCLVIPQMTLEPTLAQEGEHL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHH
RQMAHLFRAAWLRGEHTGMLVLFASQRAMQTFLGFVPDLRLGLLVQGDRPRYRLVEEHCR
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
RVHAGTQSALVGLQSFAEGLDLKGELLTQVHIHKVAFPPVDSPVILTEGEWLKSHNRYPF
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCEEEECCHHHHCCCCCCE
EVQSLPGASFTLIQQVGRLIRSHACRGEIVIYDRRLLSKPYGSRLLAALPVFPILQPPLP
EECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCHHHHHHHHCHHHCCCCCCC
EGELPAWPQPVAQKRASRHSASRRRR
CCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRVADFVRPLCDNSAPCFPQRVSMTLSSALKTQISQWYKALAQQIPDFVTRPQQRKMIA
CCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHH
EVARALSGIDARHLVIEAPTGVGKTLSYLLPGIAISRAQQKPLVVSTANVALQDQIYTQD
HHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCHHHHHHCCCCEEEEECCHHHHHHHHHCC
LPLLRRIIPDLTFTAAFGRGRYVCPRNLAALSEHQDGQGSLLLFIDDALQPGSEEDRAQC
HHHHHHHHCCCCEEHHCCCCCCCCCCHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHH
RRLQEELESRRWDGLRDHLHDNLDDGLWAKMSTDRASCLNRSCSHFRHCPFFLARREIES
HHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCHHHHHHHHCCC
ADVVVANHALVMAALESESVLPPPKDLLLVLDEGHHLPDVARDALEMEGEITALFVQGQI
CCEEEECHHHEEEECCCCCCCCCCHHEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCHH
DMIVRHIEQCQAQYQPKNPPRLLGSGRLQAHTAELRQLLTDFDRAAAGLLAGEEQHRFIL
HHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
GQLPEALGELAQRLYKLCDGLRGLSEFMMNDLQEKTGTHDALRVQRALLQMSRAFSYLEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LSKLWRLAALDQASNAPISKWLTQELSDGVHHRYLHCVGIRVCDQLERLLWRRIPHAVIT
HHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SATLRSLNRFDRISELSGLNSQAGDRFVVLDSPFDHVHQGCLVIPQMTLEPTLAQEGEHL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHCCCCEEECCCCCCCHHHHHHHHH
RQMAHLFRAAWLRGEHTGMLVLFASQRAMQTFLGFVPDLRLGLLVQGDRPRYRLVEEHCR
HHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
RVHAGTQSALVGLQSFAEGLDLKGELLTQVHIHKVAFPPVDSPVILTEGEWLKSHNRYPF
HHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCCCEEEECCHHHHCCCCCCE
EVQSLPGASFTLIQQVGRLIRSHACRGEIVIYDRRLLSKPYGSRLLAALPVFPILQPPLP
EECCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHCCCCHHHHHHHHCHHHCCCCCCC
EGELPAWPQPVAQKRASRHSASRRRR
CCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]