| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yeeA [H]
Identifier: 238919204
GI number: 238919204
Start: 1272468
End: 1273526
Strand: Direct
Name: yeeA [H]
Synonym: NT01EI_1287
Alternate gene names: 238919204
Gene position: 1272468-1273526 (Clockwise)
Preceding gene: 238919195
Following gene: 238919205
Centisome position: 33.38
GC content: 57.7
Gene sequence:
>1059_bases GTGCGTTTAAATAAAAGCATCACTCCGTTTGACTCTTTCATCTATGGGCATTATCGCGCTGTACACGGTGTGCGCATGGC GATCTCTTTCGTATTAACGTTCCTTCTGATCCGGGTGTTGGCGGTGCCAGAGGGGGTTTGGGCGCTAATCACCATGGTGG TGGTGATCGGACCGATCTCCTTTTGGGGTAACGTTACCGTCCGGGCACTGCAGCGCTGTATGGGGACGGTGTTTGGTGCC GCATCGGGGCTGGTGGCACTATATCTTGAGCTCTATTCGATGAGCCTGATGCTGGTGTGGTGCACTGTCGTTATGTTTGT CTGTGGTATCGCAGCCCTGGGCAAGCGCCCCTATATGGGGCTACTGATCGGCATCACGCTGTGCGTGGTGTCCGCCGCCG GGCCCGGCGATATTCAGACGGCACTGCTGCGCAGCGTCAACGTGATCATCGGCTCGCTGCTGGCGCTGCTGTTTGCCAGC ATTTATCCGCAGCGGGCCTTCACCCACTGGCGGTTAAAGATGAACCATGGCCTGACCTGCATGAGTAACATCTATAGTGC CTATATTTCACCTAATATGGTTGAACGCCCGCAGTTGACCGAACATCAGCAGCTCATTCTCTCCGATCTGGGCACCGTAC GCGGCCTGCTGGCACCCAGCGCCCGGGAGACCAAGGTGGATAAAGCGGTGTTCGACGCCATTCAGGTGATCACCCGTAAC CTGGTGGCCACGCTGGAGATGATGACCGACGCCTATTGGGCCAGCCGTGAAAGCCACTTTATCATGCTGAACGCCACCCG GCTGCGGATGTTTCAGAAGCTGACCATCAACGCCCTGCACGGACTGTCACAGATGCTGCTCAGCGGACGGGGGGAGGAGG CGCTGGAGCACCTGCCGGAGATGGAGCCGATGGTGGTAGAGCTGAAGACATTGATCGCGCAGGCGCAGGTGCACAGCGAC AGAGAAGCGCCGATTTATGGCTATCTGTGGCTGAATATGCAGCTGGCGATGCAGCTGGATGAGCTGCGCGATCTGTTGAG CAACGTATTGCGCCGCTGA
Upstream 100 bases:
>100_bases CCAGAAGTGATGATAAGAGTGCTGGGTATTTTTTTATGCCGAGGATTTCCGTTACACTAAAGATTCATTTTTGTTGAGAT CCTGATCCAAGGTCGTTTCC
Downstream 100 bases:
>100_bases TCGGCGCCGGGACAACGGTGGGGCGGGTGGCTGATTTTGTCCGCCCGCTGTGCGACAATAGCGCGCCATGTTTCCCGCAG CGAGTATCAATGACCCTTTC
Product: inner membrane protein YeeA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MRLNKSITPFDSFIYGHYRAVHGVRMAISFVLTFLLIRVLAVPEGVWALITMVVVIGPISFWGNVTVRALQRCMGTVFGA ASGLVALYLELYSMSLMLVWCTVVMFVCGIAALGKRPYMGLLIGITLCVVSAAGPGDIQTALLRSVNVIIGSLLALLFAS IYPQRAFTHWRLKMNHGLTCMSNIYSAYISPNMVERPQLTEHQQLILSDLGTVRGLLAPSARETKVDKAVFDAIQVITRN LVATLEMMTDAYWASRESHFIMLNATRLRMFQKLTINALHGLSQMLLSGRGEEALEHLPEMEPMVVELKTLIAQAQVHSD REAPIYGYLWLNMQLAMQLDELRDLLSNVLRR
Sequences:
>Translated_352_residues MRLNKSITPFDSFIYGHYRAVHGVRMAISFVLTFLLIRVLAVPEGVWALITMVVVIGPISFWGNVTVRALQRCMGTVFGA ASGLVALYLELYSMSLMLVWCTVVMFVCGIAALGKRPYMGLLIGITLCVVSAAGPGDIQTALLRSVNVIIGSLLALLFAS IYPQRAFTHWRLKMNHGLTCMSNIYSAYISPNMVERPQLTEHQQLILSDLGTVRGLLAPSARETKVDKAVFDAIQVITRN LVATLEMMTDAYWASRESHFIMLNATRLRMFQKLTINALHGLSQMLLSGRGEEALEHLPEMEPMVVELKTLIAQAQVHSD REAPIYGYLWLNMQLAMQLDELRDLLSNVLRR >Mature_352_residues MRLNKSITPFDSFIYGHYRAVHGVRMAISFVLTFLLIRVLAVPEGVWALITMVVVIGPISFWGNVTVRALQRCMGTVFGA ASGLVALYLELYSMSLMLVWCTVVMFVCGIAALGKRPYMGLLIGITLCVVSAAGPGDIQTALLRSVNVIIGSLLALLFAS IYPQRAFTHWRLKMNHGLTCMSNIYSAYISPNMVERPQLTEHQQLILSDLGTVRGLLAPSARETKVDKAVFDAIQVITRN LVATLEMMTDAYWASRESHFIMLNATRLRMFQKLTINALHGLSQMLLSGRGEEALEHLPEMEPMVVELKTLIAQAQVHSD REAPIYGYLWLNMQLAMQLDELRDLLSNVLRR
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788318, Length=352, Percent_Identity=49.1477272727273, Blast_Score=367, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006726 [H]
Pfam domain/function: PF04632 FUSC [H]
EC number: NA
Molecular weight: Translated: 39318; Mature: 39318
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNKSITPFDSFIYGHYRAVHGVRMAISFVLTFLLIRVLAVPEGVWALITMVVVIGPIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FWGNVTVRALQRCMGTVFGAASGLVALYLELYSMSLMLVWCTVVMFVCGIAALGKRPYMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLIGITLCVVSAAGPGDIQTALLRSVNVIIGSLLALLFASIYPQRAFTHWRLKMNHGLTC HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHH MSNIYSAYISPNMVERPQLTEHQQLILSDLGTVRGLLAPSARETKVDKAVFDAIQVITRN HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVATLEMMTDAYWASRESHFIMLNATRLRMFQKLTINALHGLSQMLLSGRGEEALEHLPE HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC MEPMVVELKTLIAQAQVHSDREAPIYGYLWLNMQLAMQLDELRDLLSNVLRR CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLNKSITPFDSFIYGHYRAVHGVRMAISFVLTFLLIRVLAVPEGVWALITMVVVIGPIS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH FWGNVTVRALQRCMGTVFGAASGLVALYLELYSMSLMLVWCTVVMFVCGIAALGKRPYMG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LLIGITLCVVSAAGPGDIQTALLRSVNVIIGSLLALLFASIYPQRAFTHWRLKMNHGLTC HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHEEECCCCCHH MSNIYSAYISPNMVERPQLTEHQQLILSDLGTVRGLLAPSARETKVDKAVFDAIQVITRN HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVATLEMMTDAYWASRESHFIMLNATRLRMFQKLTINALHGLSQMLLSGRGEEALEHLPE HHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCC MEPMVVELKTLIAQAQVHSDREAPIYGYLWLNMQLAMQLDELRDLLSNVLRR CCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503 [H]