| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is yfeY [H]
Identifier: 238919169
GI number: 238919169
Start: 1232239
End: 1232817
Strand: Direct
Name: yfeY [H]
Synonym: NT01EI_1240
Alternate gene names: 238919169
Gene position: 1232239-1232817 (Clockwise)
Preceding gene: 238919167
Following gene: 238919170
Centisome position: 32.32
GC content: 60.62
Gene sequence:
>579_bases ATGTTTTTTCGTTTCTGGATCGTCGTGGCGCCGCTGATGCTGGGTGGCTGCTCGACGCTGAGTTCATTTTCCTGGTCTAT GCTGTCGCCCTTTAACTGGTTTTCATCGGGTCTGTATATCGATAGCAATGGCGTGGGTGGCGTGTCGGCCAGTACGCCGA TGCAGCAGGAGGTCATCAGCCAGGGGTTGGACGGGGTGTATACGCTACGCAGCGGGATGGGGATCGACAACGGGCAGGTA ACGCACTTTTTCCAGGCCATGGCGCAGGATAAGGTGGCGATGACAATCGCCGGTGGCGTGACAGTGAGGCGTATTACGGT GGAGAGTGCTGAGCTTGCCACCGCTTGGGGGACACGGGTCGGGACGCCTTTTGCCGCGCTGTATACACGGGCCTATGACG GAGAGTGTCGGCGGGTGGCGGCAGAGGAGGTGACAGTGGTCTGCCGGGCGCCACAGAGTCCGCGGGTCAGTTACCAGTTC CGCGGGGAGTGGGGTGGTCCGGCAGGGCTGATGCCGCCGGATGATGTGCTGAAATCATGGACGGTAAGCCAGATTGTCTG GCAGGCGGATGCGCAGTAA
Upstream 100 bases:
>100_bases GGCGCTTTCCCCTCATCGCGGCAACTTTTTACCATTTCACCACTCCAATCTCCAGGTATTCTGTCATACGGCGACTGCCG TACTCGCAAGGAGTTAACCG
Downstream 100 bases:
>100_bases TGCGCCCTATTTTTTGTTTTATAGCAAAGGAATGCTTAAGGTATGGCGTAAGATATGCATGGTCTGGCGTAGCCGGGCCA CTGTTGCCCGGTGGCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MFFRFWIVVAPLMLGGCSTLSSFSWSMLSPFNWFSSGLYIDSNGVGGVSASTPMQQEVISQGLDGVYTLRSGMGIDNGQV THFFQAMAQDKVAMTIAGGVTVRRITVESAELATAWGTRVGTPFAALYTRAYDGECRRVAAEEVTVVCRAPQSPRVSYQF RGEWGGPAGLMPPDDVLKSWTVSQIVWQADAQ
Sequences:
>Translated_192_residues MFFRFWIVVAPLMLGGCSTLSSFSWSMLSPFNWFSSGLYIDSNGVGGVSASTPMQQEVISQGLDGVYTLRSGMGIDNGQV THFFQAMAQDKVAMTIAGGVTVRRITVESAELATAWGTRVGTPFAALYTRAYDGECRRVAAEEVTVVCRAPQSPRVSYQF RGEWGGPAGLMPPDDVLKSWTVSQIVWQADAQ >Mature_192_residues MFFRFWIVVAPLMLGGCSTLSSFSWSMLSPFNWFSSGLYIDSNGVGGVSASTPMQQEVISQGLDGVYTLRSGMGIDNGQV THFFQAMAQDKVAMTIAGGVTVRRITVESAELATAWGTRVGTPFAALYTRAYDGECRRVAAEEVTVVCRAPQSPRVSYQF RGEWGGPAGLMPPDDVLKSWTVSQIVWQADAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788772, Length=188, Percent_Identity=46.8085106382979, Blast_Score=185, Evalue=2e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010938 - ProDom: PD105195 [H]
Pfam domain/function: PF06572 DUF1131 [H]
EC number: NA
Molecular weight: Translated: 20852; Mature: 20852
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFRFWIVVAPLMLGGCSTLSSFSWSMLSPFNWFSSGLYIDSNGVGGVSASTPMQQEVIS CEEHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHH QGLDGVYTLRSGMGIDNGQVTHFFQAMAQDKVAMTIAGGVTVRRITVESAELATAWGTRV CCCCCEEEHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEEECCHHHHHHHCCCC GTPFAALYTRAYDGECRRVAAEEVTVVCRAPQSPRVSYQFRGEWGGPAGLMPPDDVLKSW CCCHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHH TVSQIVWQADAQ HHHHHHEECCCC >Mature Secondary Structure MFFRFWIVVAPLMLGGCSTLSSFSWSMLSPFNWFSSGLYIDSNGVGGVSASTPMQQEVIS CEEHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHCCEEEECCCCCCCCCCCCHHHHHHH QGLDGVYTLRSGMGIDNGQVTHFFQAMAQDKVAMTIAGGVTVRRITVESAELATAWGTRV CCCCCEEEHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCEEEEEEEECCHHHHHHHCCCC GTPFAALYTRAYDGECRRVAAEEVTVVCRAPQSPRVSYQFRGEWGGPAGLMPPDDVLKSW CCCHHHHHHHCCCCHHHHHHHHHEEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHH TVSQIVWQADAQ HHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 7764507 [H]