| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is ypeA [C]
Identifier: 238919167
GI number: 238919167
Start: 1231611
End: 1232048
Strand: Direct
Name: ypeA [C]
Synonym: NT01EI_1239
Alternate gene names: 238919167
Gene position: 1231611-1232048 (Clockwise)
Preceding gene: 238919163
Following gene: 238919169
Centisome position: 32.31
GC content: 54.11
Gene sequence:
>438_bases ATGGTCGATATCATGGAAATTCGCGTTTTTAATCAATCCGACTTTGATGAGGTGATTACGCTGTGGGAGCGCTGCGATCT GCTGCACCCCTGGAACGATCCTGAAACGGATATTGAGCGCAAGATGAATCACGATGCCGATCTGTTTCTGGTCGCACAGG TGGGTGGCGAAATCGTCGGAACTCTGATGGGCGGCTATGATGGTCATCGCGGATCAGCTTACTATCTGTGCGTGCATCCG GACTTTCGCGGCCGCGGTATCGCCAATGCGCTGGCCAGCCGTCTGGAGAAAAAGCTGCTGGCTCGCGGCTGCCCGCAGGT ACGAATCATGATCGATGCGGATAACGACGCGGCGATCAGCATGTATGAGAAGCTGGAGTATGAGACGCAGGACGTGCTGT GTCTGGGTAAGCGACTGATCATCGATCAGGAGTATTAA
Upstream 100 bases:
>100_bases CATTGCGAATCTGGGGATTGCAGCGATAATTAGGCTGCGTCCGGTCCTTGCTATACCGGTATGGTCCGAGGCCGACGCCC GGGCATCATTATAATCTATT
Downstream 100 bases:
>100_bases CAGCGCATTTTGCGTATCCCATGCGACGCCGTCGCCCGTCCGGTGCGGTGGTCTGCGCTCTGTTTTGTCCGCTCCGGCGG CGTGCGGTGCGGCGCTTTCC
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVDIMEIRVFNQSDFDEVITLWERCDLLHPWNDPETDIERKMNHDADLFLVAQVGGEIVGTLMGGYDGHRGSAYYLCVHP DFRGRGIANALASRLEKKLLARGCPQVRIMIDADNDAAISMYEKLEYETQDVLCLGKRLIIDQEY
Sequences:
>Translated_145_residues MVDIMEIRVFNQSDFDEVITLWERCDLLHPWNDPETDIERKMNHDADLFLVAQVGGEIVGTLMGGYDGHRGSAYYLCVHP DFRGRGIANALASRLEKKLLARGCPQVRIMIDADNDAAISMYEKLEYETQDVLCLGKRLIIDQEY >Mature_145_residues MVDIMEIRVFNQSDFDEVITLWERCDLLHPWNDPETDIERKMNHDADLFLVAQVGGEIVGTLMGGYDGHRGSAYYLCVHP DFRGRGIANALASRLEKKLLARGCPQVRIMIDADNDAAISMYEKLEYETQDVLCLGKRLIIDQEY
Specific function: Unknown
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI87082104, Length=141, Percent_Identity=75.177304964539, Blast_Score=228, Evalue=9e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023072 - InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 16581; Mature: 16581
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDIMEIRVFNQSDFDEVITLWERCDLLHPWNDPETDIERKMNHDADLFLVAQVGGEIVG CCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEHHCHHHHH TLMGGYDGHRGSAYYLCVHPDFRGRGIANALASRLEKKLLARGCPQVRIMIDADNDAAIS HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH MYEKLEYETQDVLCLGKRLIIDQEY HHHHHCCCCHHHHHHCCEEEEECCC >Mature Secondary Structure MVDIMEIRVFNQSDFDEVITLWERCDLLHPWNDPETDIERKMNHDADLFLVAQVGGEIVG CCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEHHCHHHHH TLMGGYDGHRGSAYYLCVHPDFRGRGIANALASRLEKKLLARGCPQVRIMIDADNDAAIS HHHCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHH MYEKLEYETQDVLCLGKRLIIDQEY HHHHHCCCCHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA