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The map label for this gene is ykfE [C]

Identifier: 238919086

GI number: 238919086

Start: 1149865

End: 1150320

Strand: Direct

Name: ykfE [C]

Synonym: NT01EI_1156

Alternate gene names: 238919086

Gene position: 1149865-1150320 (Clockwise)

Preceding gene: 238919084

Following gene: 238919087

Centisome position: 30.16

GC content: 60.75

Gene sequence:

>456_bases
ATGAAAACAATCGCCGGGGTACTGGCTGCCCTCCTGTTGGCCTACGCAGCGCCGGGAATGGCCGACGAGGCTATTCCGCC
CTCGTTGTCTGAGCTGATGGCGCAGCCGTCGTATCAGCAGAGCTGGAAACAGGCGCTGCAGGGGGAGAAAGATCTGCCGT
CGTGGGTGCGCAGCGGGCAGGGAACCTCCACGCCGCCGCAGACGCTGACCTGGCAGGATAAGGCGTACCAGGTTGGCATG
ATCTGCCAGCCACACAACTGCGGCAACCGGCAGGTGTTTATCGCCTTCAGCGGCGATCGACGCCAGGCATGGGCGCTGCG
TGTAACGCTCCCAGACAGTGATGCGGCGATGCTGCATCCCTCTAAACATGTCCACTTTCAGTGGCTGGGTAATCCGGATG
CTTCCCTGAAAACTCTGTTGATGAAACAGGTCACCTCTCAGCCGGGCTGGAAATAG

Upstream 100 bases:

>100_bases
TAATAAAAATAGTAAATGTTCTATTTATTAGTCAGCTGTAGTGTGAATAAATCACGACGCTGTTCGCTGTTGCCGCCACT
ATCTAAATGAAGGAGTTATC

Downstream 100 bases:

>100_bases
CGCGTTTCACGCGTGCGGTGCCGCTGTATCAGTGAGTAATTAGGTGTAATTAATTGTAAATCAGTACAGCGTTCGCCGTG
CGGAATGTTACTCTGCGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKTIAGVLAALLLAYAAPGMADEAIPPSLSELMAQPSYQQSWKQALQGEKDLPSWVRSGQGTSTPPQTLTWQDKAYQVGM
ICQPHNCGNRQVFIAFSGDRRQAWALRVTLPDSDAAMLHPSKHVHFQWLGNPDASLKTLLMKQVTSQPGWK

Sequences:

>Translated_151_residues
MKTIAGVLAALLLAYAAPGMADEAIPPSLSELMAQPSYQQSWKQALQGEKDLPSWVRSGQGTSTPPQTLTWQDKAYQVGM
ICQPHNCGNRQVFIAFSGDRRQAWALRVTLPDSDAAMLHPSKHVHFQWLGNPDASLKTLLMKQVTSQPGWK
>Mature_151_residues
MKTIAGVLAALLLAYAAPGMADEAIPPSLSELMAQPSYQQSWKQALQGEKDLPSWVRSGQGTSTPPQTLTWQDKAYQVGM
ICQPHNCGNRQVFIAFSGDRRQAWALRVTLPDSDAAMLHPSKHVHFQWLGNPDASLKTLLMKQVTSQPGWK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ivy family [H]

Homologues:

Organism=Escherichia coli, GI1786413, Length=105, Percent_Identity=36.1904761904762, Blast_Score=64, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014453 [H]

Pfam domain/function: PF08816 Ivy [H]

EC number: NA

Molecular weight: Translated: 16627; Mature: 16627

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTIAGVLAALLLAYAAPGMADEAIPPSLSELMAQPSYQQSWKQALQGEKDLPSWVRSGQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCC
GTSTPPQTLTWQDKAYQVGMICQPHNCGNRQVFIAFSGDRRQAWALRVTLPDSDAAMLHP
CCCCCCCCEEECCCCEEECEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEECC
SKHVHFQWLGNPDASLKTLLMKQVTSQPGWK
CCCEEEEECCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKTIAGVLAALLLAYAAPGMADEAIPPSLSELMAQPSYQQSWKQALQGEKDLPSWVRSGQ
CCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHCCCCCCHHHHHCCC
GTSTPPQTLTWQDKAYQVGMICQPHNCGNRQVFIAFSGDRRQAWALRVTLPDSDAAMLHP
CCCCCCCCEEECCCCEEECEEECCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCEEECC
SKHVHFQWLGNPDASLKTLLMKQVTSQPGWK
CCCEEEEECCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]