| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is bolA [H]
Identifier: 238919009
GI number: 238919009
Start: 1072008
End: 1072334
Strand: Direct
Name: bolA [H]
Synonym: NT01EI_1076
Alternate gene names: 238919009
Gene position: 1072008-1072334 (Clockwise)
Preceding gene: 238919005
Following gene: 238919010
Centisome position: 28.12
GC content: 61.47
Gene sequence:
>327_bases ATGATGAGAGAGCAGATAGAAGCCAAACTACAGGCGGCCTTTGAGCCGGTCTATCTGGATGTTGTGGACGAGAGCTACCG GCATAATGTCCCGGCCGGTTCGGAGACGCACTTTAAGGTGGTGATGGTCAGCGATCGCTTCCAGGGTGAGCGTTTCCTGT CGCGCCACCGCGCGATTTATGGCACGTTGGCGGACGAGATGGCCGATGGGGTGCACGCCCTGGCACTGCATACCTATACC CGTAAGGAGTGGGCGGGGCTACAGGATACGGTGCTGGCCTCCCCGGTATGCCGCGGTGTGGGCAGCGGCAGCGCACGTCT GGCCTGA
Upstream 100 bases:
>100_bases CGGGTATATCGGATGCAGCAACTAAGCCTGCCGCCACGATGTGCTCCCGACGCGTTAGCGTGTCATGTACCACTGCCGTT GCCGGATAAGGGGATGTCGT
Downstream 100 bases:
>100_bases GTGTCGCACAGGGAGTCGTATCGGCGGGTACACGAAAGAAGATGGCCTGCGGGCCCTCTTTTTTATACCCTGTGCAGGGT CGGATGGGATAGCCCGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MMREQIEAKLQAAFEPVYLDVVDESYRHNVPAGSETHFKVVMVSDRFQGERFLSRHRAIYGTLADEMADGVHALALHTYT RKEWAGLQDTVLASPVCRGVGSGSARLA
Sequences:
>Translated_108_residues MMREQIEAKLQAAFEPVYLDVVDESYRHNVPAGSETHFKVVMVSDRFQGERFLSRHRAIYGTLADEMADGVHALALHTYT RKEWAGLQDTVLASPVCRGVGSGSARLA >Mature_108_residues MMREQIEAKLQAAFEPVYLDVVDESYRHNVPAGSETHFKVVMVSDRFQGERFLSRHRAIYGTLADEMADGVHALALHTYT RKEWAGLQDTVLASPVCRGVGSGSARLA
Specific function: Plays an important role in general stress response (heat shock, acidic stress, oxidative stress, carbon-starvation stress and osmotic shock). Involved in morphogenetic pathway. Has a role in the induction of the expression of dacA (PBP5), dacC (PBP6) and
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
Organism=Homo sapiens, GI7705638, Length=95, Percent_Identity=44.2105263157895, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI87081740, Length=102, Percent_Identity=77.4509803921569, Blast_Score=173, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17541430, Length=94, Percent_Identity=45.7446808510638, Blast_Score=89, Evalue=6e-19, Organism=Drosophila melanogaster, GI221459039, Length=94, Percent_Identity=37.2340425531915, Blast_Score=75, Evalue=8e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 12022; Mature: 12022
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMREQIEAKLQAAFEPVYLDVVDESYRHNVPAGSETHFKVVMVSDRFQGERFLSRHRAIY CCHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH GTLADEMADGVHALALHTYTRKEWAGLQDTVLASPVCRGVGSGSARLA HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MMREQIEAKLQAAFEPVYLDVVDESYRHNVPAGSETHFKVVMVSDRFQGERFLSRHRAIY CCHHHHHHHHHHHCCCEEEEEECHHHHCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHH GTLADEMADGVHALALHTYTRKEWAGLQDTVLASPVCRGVGSGSARLA HHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]