| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yegX [C]
Identifier: 238917903
GI number: 238917903
Start: 2052941
End: 2053948
Strand: Direct
Name: yegX [C]
Synonym: EUBELI_01990
Alternate gene names: 238917903
Gene position: 2052941-2053948 (Clockwise)
Preceding gene: 238917902
Following gene: 238917935
Centisome position: 95.74
GC content: 35.22
Gene sequence:
>1008_bases ATGAAATCGAAGAAAACCAATCCTTTTGTGATAACAACTTTAATATTCTTTATGACAACTGTAATGTTCGGTCTTCTGAC CACCGGTGTCATTATTAAGTACCGAAAATCAACCGTTGCAACTAATACCGATAAGCTTAGCAATGACGAGATTGAGAAAC TAAAGTCAGAAGAGAAAGAGGATCTTCTTTCTGATATGAAGTTAAGATTCACTAACGGTGAAGGTTCTCTTTCTATACTT AAGAGCTATTTCCCTGATAATATAGTCTATGTGAACAATAAGAATCAGTATGTATTTGCGCAGATACTTCCTGAACTTGC GAAGAATAATTATAAGGATGAGAATTTCAAGCAGGATGATAAAGGAATTATCACATACAATGAAGACGGTAAAGTTACAA CACATATGGGTGTTGATGCTTCGAAGTTTCAGGGGAATATTGACTTTAAGAAATTAAAAGAACAGGGCGTTGAATTTGCC ATGTTAAGATGTGGTTTCAGAAGCTATGGCAATGGAATCCTGAACACTGATTCTTCATTTGATACATTTGCAAAAGACGC AATAAAGAATAATATTAAGATTGGCGCATACTTCTTCTCATCTGCAATTACGAAACAGGAAGCTATAGAAGAGGCTGATT ATGTTCTTGATATTATCAAGCCTTACAAGATTACATATCCTGTAGTTATTGACTTTGAGGAGATTTCAGGCGATTCATAC AGACAGGAGAATCTGACTACTGAAGAACTTACAGATATCATAATCGCATTCTGCAACAAGATAGAAAAAGCAGGCTATAA GCCAATGATATATTCCAACCTCAAGGGATTCGTTGGAAGACTTGACCTTACCCGCTTAGAAAAATATGAGAAGTGGTTTG CCTACTATTCAGACACACCTTACTTCCCATATGAATTCTCTATATGGCAATACACTGAATCAGCTAAGTTAGACGGTGTC AGTGGTAATACCATAGATCTTAATATTAGTTTTAAAGATTACAATTAA
Upstream 100 bases:
>100_bases ATGAATTCTAATTGACATTTTGCAAAAGCTAATATACCATTTATACAAGAAATACTTTTTATGAATAACTCATAATTAAT TATTATAGAGGTGATGCACT
Downstream 100 bases:
>100_bases TTGTGACTCACATGCTCACTGCGGAATTTCTCAATCATTTCCCTTGTGAGACTGATATGGTCATCAATTACATCTATATC ATCTGCCTTGACCCATGTGC
Product: glycoside hydrolase family 25-like lysozyme/endolysin
Products: NA
Alternate protein names: Lysozyme; 1 4-Beta-N-Acetylmuramidase; Glycoside Hydrolase Family Protein; Endolysin; N-Acetylmuramoyl-L-Alanine Amidase; Glycosyl Hydrolase Family; Basic Proline-Rich Protein; Glycosyl Hydrolase
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MKSKKTNPFVITTLIFFMTTVMFGLLTTGVIIKYRKSTVATNTDKLSNDEIEKLKSEEKEDLLSDMKLRFTNGEGSLSIL KSYFPDNIVYVNNKNQYVFAQILPELAKNNYKDENFKQDDKGIITYNEDGKVTTHMGVDASKFQGNIDFKKLKEQGVEFA MLRCGFRSYGNGILNTDSSFDTFAKDAIKNNIKIGAYFFSSAITKQEAIEEADYVLDIIKPYKITYPVVIDFEEISGDSY RQENLTTEELTDIIIAFCNKIEKAGYKPMIYSNLKGFVGRLDLTRLEKYEKWFAYYSDTPYFPYEFSIWQYTESAKLDGV SGNTIDLNISFKDYN
Sequences:
>Translated_335_residues MKSKKTNPFVITTLIFFMTTVMFGLLTTGVIIKYRKSTVATNTDKLSNDEIEKLKSEEKEDLLSDMKLRFTNGEGSLSIL KSYFPDNIVYVNNKNQYVFAQILPELAKNNYKDENFKQDDKGIITYNEDGKVTTHMGVDASKFQGNIDFKKLKEQGVEFA MLRCGFRSYGNGILNTDSSFDTFAKDAIKNNIKIGAYFFSSAITKQEAIEEADYVLDIIKPYKITYPVVIDFEEISGDSY RQENLTTEELTDIIIAFCNKIEKAGYKPMIYSNLKGFVGRLDLTRLEKYEKWFAYYSDTPYFPYEFSIWQYTESAKLDGV SGNTIDLNISFKDYN >Mature_335_residues MKSKKTNPFVITTLIFFMTTVMFGLLTTGVIIKYRKSTVATNTDKLSNDEIEKLKSEEKEDLLSDMKLRFTNGEGSLSIL KSYFPDNIVYVNNKNQYVFAQILPELAKNNYKDENFKQDDKGIITYNEDGKVTTHMGVDASKFQGNIDFKKLKEQGVEFA MLRCGFRSYGNGILNTDSSFDTFAKDAIKNNIKIGAYFFSSAITKQEAIEEADYVLDIIKPYKITYPVVIDFEEISGDSY RQENLTTEELTDIIIAFCNKIEKAGYKPMIYSNLKGFVGRLDLTRLEKYEKWFAYYSDTPYFPYEFSIWQYTESAKLDGV SGNTIDLNISFKDYN
Specific function: Unknown
COG id: COG3757
COG function: function code M; Lyzozyme M1 (1,4-beta-N-acetylmuramidase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38522; Mature: 38522
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSKKTNPFVITTLIFFMTTVMFGLLTTGVIIKYRKSTVATNTDKLSNDEIEKLKSEEKE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHH DLLSDMKLRFTNGEGSLSILKSYFPDNIVYVNNKNQYVFAQILPELAKNNYKDENFKQDD HHHHCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCC KGIITYNEDGKVTTHMGVDASKFQGNIDFKKLKEQGVEFAMLRCGFRSYGNGILNTDSSF CEEEEECCCCCEEEEECCCHHHHCCCCCHHHHHHCCHHEEHHHHHHHHHCCCCCCCCCCH DTFAKDAIKNNIKIGAYFFSSAITKQEAIEEADYVLDIIKPYKITYPVVIDFEEISGDSY HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHCCCCCH RQENLTTEELTDIIIAFCNKIEKAGYKPMIYSNLKGFVGRLDLTRLEKYEKWFAYYSDTP HHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC YFPYEFSIWQYTESAKLDGVSGNTIDLNISFKDYN CCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKSKKTNPFVITTLIFFMTTVMFGLLTTGVIIKYRKSTVATNTDKLSNDEIEKLKSEEKE CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHHH DLLSDMKLRFTNGEGSLSILKSYFPDNIVYVNNKNQYVFAQILPELAKNNYKDENFKQDD HHHHCCEEEEECCCCHHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCCC KGIITYNEDGKVTTHMGVDASKFQGNIDFKKLKEQGVEFAMLRCGFRSYGNGILNTDSSF CEEEEECCCCCEEEEECCCHHHHCCCCCHHHHHHCCHHEEHHHHHHHHHCCCCCCCCCCH DTFAKDAIKNNIKIGAYFFSSAITKQEAIEEADYVLDIIKPYKITYPVVIDFEEISGDSY HHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEHHCCCCCH RQENLTTEELTDIIIAFCNKIEKAGYKPMIYSNLKGFVGRLDLTRLEKYEKWFAYYSDTP HHCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC YFPYEFSIWQYTESAKLDGVSGNTIDLNISFKDYN CCCEEEEEEEECCCCCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA