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The map label for this gene is tadA [H]

Identifier: 238917935

GI number: 238917935

Start: 2092859

End: 2093389

Strand: Direct

Name: tadA [H]

Synonym: EUBELI_02023

Alternate gene names: 238917935

Gene position: 2092859-2093389 (Clockwise)

Preceding gene: 238917903

Following gene: 238917936

Centisome position: 97.61

GC content: 40.87

Gene sequence:

>531_bases
GTGGAGGATAATTTAGTGGATAATACTCAGGTGGATTTTGAAAAAGATGATTACAGATATATGAAACAGGCAATCACACA
GGCTAAGAAGGCTTATAAACTCAATGAAGTGCCTATCGGCTGTGTGATTGTGTATGAAGGAAAGGTTATAGGAAGAGGCT
ACAACCGCCGTAACACTGATAAAACCTCTCTCGGCCATGCCGAGATTACTGCAATTAAGAAAGCCAGCCGCTACATGAAC
GACTGGCGGCTTGAGAACTGCACTTTATATGTTACGCTTGAACCTTGTCAGATGTGTGCAGGTGCTATTGTTCAGGCAAG
AATTCCAAGAGTTGTTATCGGTTCCATGAATCCCAAAGCAGGATGTGCCGGTTCTATACTTAATATACTGCAGATTCCGA
CATTTAATCACCAGTGCGAAATTACTAAAGGTGTATGTGAAGAAGAATGTTCAGAAATGCTCACAACATTTTTCAAGGAA
CTGCGTAAAAGCAAGAAAAAGAATACTACTGTCACTACTGATGGAGAATGA

Upstream 100 bases:

>100_bases
ATAATTCTGCGCACGTTCCCTCCTTTTATTATTAATACGAAAAATGTTCCAGATAAGTTGACGCATTTTCACAAAAAAGT
TAAAATTTTTATAATATTTT

Downstream 100 bases:

>100_bases
TTATGAAATTTGAATACGATTTTGAAGGCATGAAGCTTAAAGTACTTGATGAAACATTTGCAGGAAAAGTACTTGAATTC
TACAGCCGTAACCGTGAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MEDNLVDNTQVDFEKDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKKASRYMN
DWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPTFNHQCEITKGVCEEECSEMLTTFFKE
LRKSKKKNTTVTTDGE

Sequences:

>Translated_176_residues
MEDNLVDNTQVDFEKDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKKASRYMN
DWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPTFNHQCEITKGVCEEECSEMLTTFFKE
LRKSKKKNTTVTTDGE
>Mature_176_residues
MEDNLVDNTQVDFEKDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTDKTSLGHAEITAIKKASRYMN
DWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKAGCAGSILNILQIPTFNHQCEITKGVCEEECSEMLTTFFKE
LRKSKKKNTTVTTDGE

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=154, Percent_Identity=38.3116883116883, Blast_Score=102, Evalue=1e-22,
Organism=Escherichia coli, GI145693172, Length=167, Percent_Identity=42.5149700598802, Blast_Score=153, Evalue=5e-39,
Organism=Escherichia coli, GI1786616, Length=156, Percent_Identity=30.1282051282051, Blast_Score=68, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17541138, Length=175, Percent_Identity=32, Blast_Score=89, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17554608, Length=107, Percent_Identity=38.3177570093458, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6322425, Length=154, Percent_Identity=31.8181818181818, Blast_Score=76, Evalue=4e-15,
Organism=Saccharomyces cerevisiae, GI6325319, Length=102, Percent_Identity=38.2352941176471, Blast_Score=70, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=30.8219178082192, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 19885; Mature: 19885

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNLVDNTQVDFEKDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCC
KTSLGHAEITAIKKASRYMNDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKA
CCCCCHHHHHHHHHHHHHHHHCEECCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCC
GCAGSILNILQIPTFNHQCEITKGVCEEECSEMLTTFFKELRKSKKKNTTVTTDGE
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure
MEDNLVDNTQVDFEKDDYRYMKQAITQAKKAYKLNEVPIGCVIVYEGKVIGRGYNRRNTD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEECCCCCCCCC
KTSLGHAEITAIKKASRYMNDWRLENCTLYVTLEPCQMCAGAIVQARIPRVVIGSMNPKA
CCCCCHHHHHHHHHHHHHHHHCEECCEEEEEEECHHHHHHHHHHHHCCCEEEEECCCCCC
GCAGSILNILQIPTFNHQCEITKGVCEEECSEMLTTFFKELRKSKKKNTTVTTDGE
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]