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The map label for this gene is lytT [H]

Identifier: 238917824

GI number: 238917824

Start: 1970100

End: 1970786

Strand: Reverse

Name: lytT [H]

Synonym: EUBELI_01905

Alternate gene names: 238917824

Gene position: 1970786-1970100 (Counterclockwise)

Preceding gene: 238917825

Following gene: 238917823

Centisome position: 91.91

GC content: 33.92

Gene sequence:

>687_bases
TTGACGAGATTTACTATATGCGATGATGAGCCGGAGCATGGCAGATTAATAGGTAAATATATAAAGACTGAATATGCAAA
GCACATGCCAGAGACTGATATAGCAGAAGTTGTGATATATCAGTCTCCGCAAGAAATGCTTGATGAAGCGATAGAAGACA
CAGATATATTCATACTTGATATTGAGTGTGGAAAGTCAAGCGGATTAGATATTGCAAAGGAGATACGCAGATTAAATAAA
AATGCAGGAATAGTATTCTGCACATCACATAGCAATTATGTGTATCAGGTATTCGGTCTTACTCCTATTGATTTTATAAG
AAAGAATAATATTGAAAACGATATTGTACAGACAATGTATAATATTATGGATTTTCTCAGAGGAAAAAAGAAAATACTTG
TAATTGAGAAAGGCGATATAATAAGACTTTCAGATATTGTGTCTGTGAATGTTATAAAACATGACCTTATATTCAAAGGT
GTTAATGGCGAGAGAAAAATAAGAGCCAACCTAAGTACATATGAAGAGCAGCTAAAGCAGTTCGGTTTCATTAAGATATC
ACAGGGCGAGATGGTCAATAAGGATTATGTTAAAGAAAGAAAAAAGGATAATCTTATTATGAAGGATGGCACAGTCTATC
ACATAAGCAGAAGCAGAGTCGATGAGATAAGGAGAATGTTCATATGA

Upstream 100 bases:

>100_bases
TGCCATAGAGAAAAATGTTCCTGCTAAATTCCTTGAGCTTAACAGGAAGGCATTTGAACTGGGAAGAAATGCTTAGATAA
TACACACAGGGGGAAGGCAT

Downstream 100 bases:

>100_bases
CAGATATAATATTCGAAAGTTTCATAAATCTGTTTCAGAGTGTAGTTGTGACCGTGTTCCTTATTATTAGTCTTGGTTGT
AAGGATAAGTATAATAAGAA

Product: two-component system LytT family response regulator LytT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTRFTICDDEPEHGRLIGKYIKTEYAKHMPETDIAEVVIYQSPQEMLDEAIEDTDIFILDIECGKSSGLDIAKEIRRLNK
NAGIVFCTSHSNYVYQVFGLTPIDFIRKNNIENDIVQTMYNIMDFLRGKKKILVIEKGDIIRLSDIVSVNVIKHDLIFKG
VNGERKIRANLSTYEEQLKQFGFIKISQGEMVNKDYVKERKKDNLIMKDGTVYHISRSRVDEIRRMFI

Sequences:

>Translated_228_residues
MTRFTICDDEPEHGRLIGKYIKTEYAKHMPETDIAEVVIYQSPQEMLDEAIEDTDIFILDIECGKSSGLDIAKEIRRLNK
NAGIVFCTSHSNYVYQVFGLTPIDFIRKNNIENDIVQTMYNIMDFLRGKKKILVIEKGDIIRLSDIVSVNVIKHDLIFKG
VNGERKIRANLSTYEEQLKQFGFIKISQGEMVNKDYVKERKKDNLIMKDGTVYHISRSRVDEIRRMFI
>Mature_227_residues
TRFTICDDEPEHGRLIGKYIKTEYAKHMPETDIAEVVIYQSPQEMLDEAIEDTDIFILDIECGKSSGLDIAKEIRRLNKN
AGIVFCTSHSNYVYQVFGLTPIDFIRKNNIENDIVQTMYNIMDFLRGKKKILVIEKGDIIRLSDIVSVNVIKHDLIFKGV
NGERKIRANLSTYEEQLKQFGFIKISQGEMVNKDYVKERKKDNLIMKDGTVYHISRSRVDEIRRMFI

Specific function: Member of the two-component regulatory system lytS/lytT that probably regulates genes involved in cell wall metabolism [H]

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 26535; Mature: 26404

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRFTICDDEPEHGRLIGKYIKTEYAKHMPETDIAEVVIYQSPQEMLDEAIEDTDIFILD
CCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHCCCCEEEEE
IECGKSSGLDIAKEIRRLNKNAGIVFCTSHSNYVYQVFGLTPIDFIRKNNIENDIVQTMY
EECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
NIMDFLRGKKKILVIEKGDIIRLSDIVSVNVIKHDLIFKGVNGERKIRANLSTYEEQLKQ
HHHHHHCCCCEEEEEECCCEEEEEHHEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHH
FGFIKISQGEMVNKDYVKERKKDNLIMKDGTVYHISRSRVDEIRRMFI
CCCEEECCCCCCCHHHHHHHHHCCEEEECCEEEEEHHHHHHHHHHHCC
>Mature Secondary Structure 
TRFTICDDEPEHGRLIGKYIKTEYAKHMPETDIAEVVIYQSPQEMLDEAIEDTDIFILD
CEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHHHHHCCCCEEEEE
IECGKSSGLDIAKEIRRLNKNAGIVFCTSHSNYVYQVFGLTPIDFIRKNNIENDIVQTMY
EECCCCCCCHHHHHHHHHCCCCCEEEEECCCCEEEEEECCCHHHHHHHCCCHHHHHHHHH
NIMDFLRGKKKILVIEKGDIIRLSDIVSVNVIKHDLIFKGVNGERKIRANLSTYEEQLKQ
HHHHHHCCCCEEEEEECCCEEEEEHHEEEEEEEEEEEEECCCCCEEEEECHHHHHHHHHH
FGFIKISQGEMVNKDYVKERKKDNLIMKDGTVYHISRSRVDEIRRMFI
CCCEEECCCCCCCHHHHHHHHHCCEEEECCEEEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]