| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238917823
Identifier: 238917823
GI number: 238917823
Start: 1968799
End: 1970103
Strand: Reverse
Name: 238917823
Synonym: EUBELI_01904
Alternate gene names: NA
Gene position: 1970103-1968799 (Counterclockwise)
Preceding gene: 238917824
Following gene: 238917822
Centisome position: 91.88
GC content: 33.79
Gene sequence:
>1305_bases ATGACAGATATAATATTCGAAAGTTTCATAAATCTGTTTCAGAGTGTAGTTGTGACCGTGTTCCTTATTATTAGTCTTGG TTGTAAGGATAAGTATAATAAGAAATGTGTCAGTGCTGCCGGGATATTGATTACATTCATATATCTTACTGTATCTAACC ATATTGTATACTTTGAGAGTGTGGCAATATATGTATATATGGTATATTCACTGATATTCAGTTTTGTAGTATTGGGCGGA AGTGTTATTGAGAAGATATTCTACAACGTCATGATGATATGCTGTCTGGCTGGAAGTTCGTTACTAGGTGGTGGATTGGT ATCACTTGTTGTTAAGAAAGATTTTCTTAATGCACATAGATATGGAACGGGTTCAAGATATGTAAGTGTTATATTTGTAC AGATATTACTTATGCTGTTTTTGGGATTCATTATAAAATTAAAGGTGTTTTTAAAGGAAAAAGATAATCAATACATGCTT ATAATGTCCTTGATACCAGCTATATCGGTCATAGTATGCTGTTTTATGGTATATCGTTCAGATAAGAGCTATGAGATGAA TGTAATATATACATTTATTGCCATGGCGGGCATTATAATAATTAATGTTATAAGTGTATTACTGCTTATTATGGAACAGA AGGTATATGAACAGAAAACCCGTCAGCAGGTTATGCTTAGCGCATATCAGCAGAAGGAGAAAGATATTGAATCGATACTT GATATGCAGAAGCAGAACAGTAAGCAAAGACATGACATTAATAATGTCCTGATCCTTATCAGTGAGCTTATTCAGGATGA GAAGTATTCAAAGGCACTTGAGGTGCTTGATAAATATCGTACAGGTTATAATAACATTAATGTTACAGAGATTGTAAGTA ATAATATTGTGCTTAATTATCTGCTGAACAGAAAGATTAACCAGTGCCGTGAGGCTGGAATTGACATGGCATGTTATGTA CTGTGGAATATTGCAGGTGTTGATGATATGGACTTATATATACTTCTTGAGAATCTGTGTGATAATGCTATTGAAGCAGC AGGACAATGTGAGAAGCCATCAATTAAGCTCCAGATAGCAGAGGATAATGCCAGCATGTATATAGACATAGGTAATACCA CAAGTGGTAATGTGTTAAATAACAATCCACACATGAATACAACCAAGAAGGATAAGAACATGCATGGTTTCGGAATTATG AATATCAGAGATATTATTGATAAATATAATGGAACTATCAACTATGAACAGCAGGGAGATAATTATCTGATGTGCAGATG CACATTAGAAAAGGTTTGTCAATAG
Upstream 100 bases:
>100_bases ATTATGTTAAAGAAAGAAAAAAGGATAATCTTATTATGAAGGATGGCACAGTCTATCACATAAGCAGAAGCAGAGTCGAT GAGATAAGGAGAATGTTCAT
Downstream 100 bases:
>100_bases TTTTTTGATAAATAAAATTGTGCAGAATATGCCATATATTACCGAATATGCCAAACTACTTTTTTAAAAAATTAAATCAG CTATAATCAATGTATAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MTDIIFESFINLFQSVVVTVFLIISLGCKDKYNKKCVSAAGILITFIYLTVSNHIVYFESVAIYVYMVYSLIFSFVVLGG SVIEKIFYNVMMICCLAGSSLLGGGLVSLVVKKDFLNAHRYGTGSRYVSVIFVQILLMLFLGFIIKLKVFLKEKDNQYML IMSLIPAISVIVCCFMVYRSDKSYEMNVIYTFIAMAGIIIINVISVLLLIMEQKVYEQKTRQQVMLSAYQQKEKDIESIL DMQKQNSKQRHDINNVLILISELIQDEKYSKALEVLDKYRTGYNNINVTEIVSNNIVLNYLLNRKINQCREAGIDMACYV LWNIAGVDDMDLYILLENLCDNAIEAAGQCEKPSIKLQIAEDNASMYIDIGNTTSGNVLNNNPHMNTTKKDKNMHGFGIM NIRDIIDKYNGTINYEQQGDNYLMCRCTLEKVCQ
Sequences:
>Translated_434_residues MTDIIFESFINLFQSVVVTVFLIISLGCKDKYNKKCVSAAGILITFIYLTVSNHIVYFESVAIYVYMVYSLIFSFVVLGG SVIEKIFYNVMMICCLAGSSLLGGGLVSLVVKKDFLNAHRYGTGSRYVSVIFVQILLMLFLGFIIKLKVFLKEKDNQYML IMSLIPAISVIVCCFMVYRSDKSYEMNVIYTFIAMAGIIIINVISVLLLIMEQKVYEQKTRQQVMLSAYQQKEKDIESIL DMQKQNSKQRHDINNVLILISELIQDEKYSKALEVLDKYRTGYNNINVTEIVSNNIVLNYLLNRKINQCREAGIDMACYV LWNIAGVDDMDLYILLENLCDNAIEAAGQCEKPSIKLQIAEDNASMYIDIGNTTSGNVLNNNPHMNTTKKDKNMHGFGIM NIRDIIDKYNGTINYEQQGDNYLMCRCTLEKVCQ >Mature_433_residues TDIIFESFINLFQSVVVTVFLIISLGCKDKYNKKCVSAAGILITFIYLTVSNHIVYFESVAIYVYMVYSLIFSFVVLGGS VIEKIFYNVMMICCLAGSSLLGGGLVSLVVKKDFLNAHRYGTGSRYVSVIFVQILLMLFLGFIIKLKVFLKEKDNQYMLI MSLIPAISVIVCCFMVYRSDKSYEMNVIYTFIAMAGIIIINVISVLLLIMEQKVYEQKTRQQVMLSAYQQKEKDIESILD MQKQNSKQRHDINNVLILISELIQDEKYSKALEVLDKYRTGYNNINVTEIVSNNIVLNYLLNRKINQCREAGIDMACYVL WNIAGVDDMDLYILLENLCDNAIEAAGQCEKPSIKLQIAEDNASMYIDIGNTTSGNVLNNNPHMNTTKKDKNMHGFGIMN IRDIIDKYNGTINYEQQGDNYLMCRCTLEKVCQ
Specific function: Unknown
COG id: COG2972
COG function: function code T; Predicted signal transduction protein with a C-terminal ATPase domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49440; Mature: 49309
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDIIFESFINLFQSVVVTVFLIISLGCKDKYNKKCVSAAGILITFIYLTVSNHIVYFES CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHH VAIYVYMVYSLIFSFVVLGGSVIEKIFYNVMMICCLAGSSLLGGGLVSLVVKKDFLNAHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHC YGTGSRYVSVIFVQILLMLFLGFIIKLKVFLKEKDNQYMLIMSLIPAISVIVCCFMVYRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCC DKSYEMNVIYTFIAMAGIIIINVISVLLLIMEQKVYEQKTRQQVMLSAYQQKEKDIESIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMQKQNSKQRHDINNVLILISELIQDEKYSKALEVLDKYRTGYNNINVTEIVSNNIVLNY HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH LLNRKINQCREAGIDMACYVLWNIAGVDDMDLYILLENLCDNAIEAAGQCEKPSIKLQIA HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE EDNASMYIDIGNTTSGNVLNNNPHMNTTKKDKNMHGFGIMNIRDIIDKYNGTINYEQQGD ECCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCC NYLMCRCTLEKVCQ CEEEEEEEHHHHCC >Mature Secondary Structure TDIIFESFINLFQSVVVTVFLIISLGCKDKYNKKCVSAAGILITFIYLTVSNHIVYFES CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHH VAIYVYMVYSLIFSFVVLGGSVIEKIFYNVMMICCLAGSSLLGGGLVSLVVKKDFLNAHR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHC YGTGSRYVSVIFVQILLMLFLGFIIKLKVFLKEKDNQYMLIMSLIPAISVIVCCFMVYRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHCC DKSYEMNVIYTFIAMAGIIIINVISVLLLIMEQKVYEQKTRQQVMLSAYQQKEKDIESIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DMQKQNSKQRHDINNVLILISELIQDEKYSKALEVLDKYRTGYNNINVTEIVSNNIVLNY HHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHH LLNRKINQCREAGIDMACYVLWNIAGVDDMDLYILLENLCDNAIEAAGQCEKPSIKLQIA HHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE EDNASMYIDIGNTTSGNVLNNNPHMNTTKKDKNMHGFGIMNIRDIIDKYNGTINYEQQGD ECCCEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCC NYLMCRCTLEKVCQ CEEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA