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The map label for this gene is resD [H]

Identifier: 238917773

GI number: 238917773

Start: 1918156

End: 1918857

Strand: Direct

Name: resD [H]

Synonym: EUBELI_01854

Alternate gene names: 238917773

Gene position: 1918156-1918857 (Clockwise)

Preceding gene: 238917772

Following gene: 238917774

Centisome position: 89.46

GC content: 38.18

Gene sequence:

>702_bases
ATGGCATCTAAACAGCGAATACTTATTGTAGATGATGATGAAAATATTGCAGAACTTATATCTTTGTATCTTACAAAAGA
ATGTTACGAAACAAAGATTGTGTATGATGGAGAAAGTGCTCTGTCTGAGCTTTCTGTATTCAAGCCCAATCTCATTCTTT
TAGACCTCATGCTTCCCGGTATTGACGGCTATCAGGTGTGCCGTGAGATAAGAAAGAATAACAATGTTCCTATAATTATG
CTCTCCGCCAAGGGCGAAACATTTGACAAGGTACTAGGACTTGAGCTTGGTGCAGATGACTATATTATCAAACCTTTTGA
AACTAAAGAGATGGTTGCCCGTGTAAAGGCTGTGCTTAGAAGATACCATATGCCTCAGAGTATCGGTGTTGATTCTTCTA
ATGCCAAATGTGTCAATTACCCCGACCTCTCTATCAACCTCGATAATTATTCGGTTAATTATATGGGCAAAAATGTCGAG
ATGCCACCTAAGGAACTTGAGCTCTTATATTTCTTAGCATCTGCTCCTAATCAGGTGTTTACAAGAGAACAGCTTCTTGA
CAATATATGGGGATATGAATATATCGGAGATACAAGAACCGTTGATGTACACATTAAGAGAATCCGTGAGAAAATCAAGG
ATCATGTCCACTGGAATATTGAAACAGTATGGGGAATTGGTTACAAGTTCGTAACTAAATAA

Upstream 100 bases:

>100_bases
TGTTCCATATATAAAGAGCTTCCGCCTCGGCGAAATCGGCGAGGGTGATGCTGGTGTAACTATTGTTGATTTCAAATAAT
TATTATTGGGGGATATTATT

Downstream 100 bases:

>100_bases
AAAGGGCAGGACAAGGAGGCTTAATATTGAAGGGCTTAAGTACACTGGGGAAGCACATTTTTTTATATATAGCTATATCC
ATTATAGGATTTATTATTGT

Product: two-component system OmpR family response regulator ResD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MASKQRILIVDDDENIAELISLYLTKECYETKIVYDGESALSELSVFKPNLILLDLMLPGIDGYQVCREIRKNNNVPIIM
LSAKGETFDKVLGLELGADDYIIKPFETKEMVARVKAVLRRYHMPQSIGVDSSNAKCVNYPDLSINLDNYSVNYMGKNVE
MPPKELELLYFLASAPNQVFTREQLLDNIWGYEYIGDTRTVDVHIKRIREKIKDHVHWNIETVWGIGYKFVTK

Sequences:

>Translated_233_residues
MASKQRILIVDDDENIAELISLYLTKECYETKIVYDGESALSELSVFKPNLILLDLMLPGIDGYQVCREIRKNNNVPIIM
LSAKGETFDKVLGLELGADDYIIKPFETKEMVARVKAVLRRYHMPQSIGVDSSNAKCVNYPDLSINLDNYSVNYMGKNVE
MPPKELELLYFLASAPNQVFTREQLLDNIWGYEYIGDTRTVDVHIKRIREKIKDHVHWNIETVWGIGYKFVTK
>Mature_232_residues
ASKQRILIVDDDENIAELISLYLTKECYETKIVYDGESALSELSVFKPNLILLDLMLPGIDGYQVCREIRKNNNVPIIML
SAKGETFDKVLGLELGADDYIIKPFETKEMVARVKAVLRRYHMPQSIGVDSSNAKCVNYPDLSINLDNYSVNYMGKNVEM
PPKELELLYFLASAPNQVFTREQLLDNIWGYEYIGDTRTVDVHIKRIREKIKDHVHWNIETVWGIGYKFVTK

Specific function: Member of the two-component regulatory system ResD/ResE. Required for the expression of resA, ctaA, qcrABC and fnr; activation role in global regulation of aerobic and anaerobic respiration [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=39.0557939914163, Blast_Score=173, Evalue=8e-45,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=38.7665198237885, Blast_Score=172, Evalue=1e-44,
Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=37.7118644067797, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=34.2105263157895, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI2367329, Length=229, Percent_Identity=35.8078602620087, Blast_Score=140, Evalue=6e-35,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=32.4444444444444, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1790860, Length=214, Percent_Identity=30.8411214953271, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI1786911, Length=232, Percent_Identity=31.4655172413793, Blast_Score=124, Evalue=7e-30,
Organism=Escherichia coli, GI145693140, Length=233, Percent_Identity=32.1888412017167, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1790863, Length=227, Percent_Identity=29.9559471365639, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787229, Length=223, Percent_Identity=29.5964125560538, Blast_Score=114, Evalue=7e-27,
Organism=Escherichia coli, GI1790552, Length=228, Percent_Identity=32.0175438596491, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789402, Length=229, Percent_Identity=28.82096069869, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1787375, Length=227, Percent_Identity=26.8722466960352, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1788550, Length=129, Percent_Identity=32.5581395348837, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1790299, Length=122, Percent_Identity=27.8688524590164, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26830; Mature: 26699

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKQRILIVDDDENIAELISLYLTKECYETKIVYDGESALSELSVFKPNLILLDLMLPG
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCEEEEEEECCC
IDGYQVCREIRKNNNVPIIMLSAKGETFDKVLGLELGADDYIIKPFETKEMVARVKAVLR
CCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCEEECCCCEEECCCCHHHHHHHHHHHHH
RYHMPQSIGVDSSNAKCVNYPDLSINLDNYSVNYMGKNVEMPPKELELLYFLASAPNQVF
HHCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCHHHHHEEHEECCCCCHHH
TREQLLDNIWGYEYIGDTRTVDVHIKRIREKIKDHVHWNIETVWGIGYKFVTK
HHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHEECEEEEEECCEEEECC
>Mature Secondary Structure 
ASKQRILIVDDDENIAELISLYLTKECYETKIVYDGESALSELSVFKPNLILLDLMLPG
CCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEEECCHHHHHHHHHCCCCEEEEEEECCC
IDGYQVCREIRKNNNVPIIMLSAKGETFDKVLGLELGADDYIIKPFETKEMVARVKAVLR
CCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHCEEECCCCEEECCCCHHHHHHHHHHHHH
RYHMPQSIGVDSSNAKCVNYPDLSINLDNYSVNYMGKNVEMPPKELELLYFLASAPNQVF
HHCCCCCCCCCCCCCEEEECCCCEEEECCEEEEEECCCCCCCHHHHHEEHEECCCCCHHH
TREQLLDNIWGYEYIGDTRTVDVHIKRIREKIKDHVHWNIETVWGIGYKFVTK
HHHHHHHHHCCEEECCCCEEEHHHHHHHHHHHHHHHEECEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715; 8682783 [H]