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The map label for this gene is yesN [H]

Identifier: 238917632

GI number: 238917632

Start: 1778654

End: 1780198

Strand: Reverse

Name: yesN [H]

Synonym: EUBELI_01711

Alternate gene names: 238917632

Gene position: 1780198-1778654 (Counterclockwise)

Preceding gene: 238917633

Following gene: 238917631

Centisome position: 83.02

GC content: 37.09

Gene sequence:

>1545_bases
ATGTATAATATACTTATAGTGGATGATGAAAAGATTGAAAGAAGCGGAATAAGAATGCTTCTTAAGAGAATGGGAATTGA
GCTTGGAGTATTTGAGGCGTGCAACGGAAAGCAGGCACTGGAATATCTGACATCTGACAAGAATACAGGAATTGGACATA
TAGATATACTGCTTACAGATGTTAAGATGCCGTTTATGGACGGGATAGAGCTTATTAAGAATGTGATGCACAACGACATC
AGTTTAAAGACAATTATATTCTCAGGCTATAACGAGTTTGAGTATGCCAAGCTGGCAGTTAAATTAGGAGTTAAAGATTA
TATATTAAAGCCGGTTGATCCGTCAGAATTCAGTTCGACAATTACAGGGGTTATAACAGAGCTTGACGAGGAACACAAGA
AGGATGAGGACTATAACAGGCAGGCTAACTTTATAAAACAGTACTACATGTATACGCTGCTCAACTCCGGTGATGCATCA
GGAATACTTGATAATGGGGATTTTCTGGCAGGGTATAACAGACTTGCACTTATAGAATTCAATACTGATTTCTTTGGGAA
ATATGATACAGGTGAAGACATATTTAAAGAGATAACCGGGGAACTGGATTATCAGTACCTTAATCTTAACCCGTTACAGT
CAGTTATCATATTTTCTGATAAATCATTCACAGCAGATGGTAATATTGATAAGAACATTGAAGAAATGTTTACAAATATT
CATGACTATATATATAGAAAGACAGGACAGTTTATGTATATTGCTGTGTCCGGTTTATTCAACGATTATCATGAGCTTCC
ACAGGTAATGGATGCAGTTGATACACTGATGAATAATAAGTTTTATGAGACAGGAAGATATATTTTTTCTGATAATATCA
GTGAAGATACACCTGTGCTTGTACAGATTGATGATGATGCACTTATGAAGCAGATGAAGCAGGATATCAAGATGAAGGAT
ATCACATTTTTACGGATACATTTTGATGCATTGTGTAAGAAATACAGGGGGCAGTCGAACTTCTCACATATATACATCAA
GTTCGTATTTTCCAATCTGTTAAAAGATTTCTATGACAATATTCCGGGTGCTGATGAGGCGGAATTTGGCAGGGAGATTG
ACAGACTGTATAAGTCGGAGGATTTCTCATGCATTATGGATATAGTGAATAACTATATTGATTTGTTGGAAAAGAGTTTT
GGAAAAGAGCCGGCCACGTCACACCGGGAGATTGAGACCGTAAAGAATTATATACATAACCATTATGGTGAGGAGATTGG
CGCACAGCAGCTTGCGGATATGGTTTATCTTGCACCAAGCTATTTAAGTTCACTTTTTAAGAAGGAAACAGGACAGAATC
TGAGCAAATATATTAAACAGTACAGAATGGAGAAGGCTAAGGAACTGCTTACCGGTACGAACATGAAGATTGTGAATATA
AGTGAGCAGGTGGGTTATCCAAATGTTTCATATTTTGTACAGAGCTTCAGGGAGTACTTTGGTATAAGTCCTCAGAAATT
CAGGGATCAGGGAGAATTGAGTTGA

Upstream 100 bases:

>100_bases
ATCTTTAATATAACTAAATAAGTTGATAATAATTGCCCCGGAAGCTATAATCATTATAAGAGCAAAAGTTCGTGAATGAG
GAAGGTTTCGGGGTAGATTT

Downstream 100 bases:

>100_bases
AAAAGATTAAGCAGAAAATCAATGATATAAGATTGCAGAACAAGCTTGTCATCATATATGTAGTGACCGGACTTATTCCC
CTGATTGTGCTTTTTGTTTT

Product: two-component system response regulator YesN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MYNILIVDDEKIERSGIRMLLKRMGIELGVFEACNGKQALEYLTSDKNTGIGHIDILLTDVKMPFMDGIELIKNVMHNDI
SLKTIIFSGYNEFEYAKLAVKLGVKDYILKPVDPSEFSSTITGVITELDEEHKKDEDYNRQANFIKQYYMYTLLNSGDAS
GILDNGDFLAGYNRLALIEFNTDFFGKYDTGEDIFKEITGELDYQYLNLNPLQSVIIFSDKSFTADGNIDKNIEEMFTNI
HDYIYRKTGQFMYIAVSGLFNDYHELPQVMDAVDTLMNNKFYETGRYIFSDNISEDTPVLVQIDDDALMKQMKQDIKMKD
ITFLRIHFDALCKKYRGQSNFSHIYIKFVFSNLLKDFYDNIPGADEAEFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSF
GKEPATSHREIETVKNYIHNHYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNI
SEQVGYPNVSYFVQSFREYFGISPQKFRDQGELS

Sequences:

>Translated_514_residues
MYNILIVDDEKIERSGIRMLLKRMGIELGVFEACNGKQALEYLTSDKNTGIGHIDILLTDVKMPFMDGIELIKNVMHNDI
SLKTIIFSGYNEFEYAKLAVKLGVKDYILKPVDPSEFSSTITGVITELDEEHKKDEDYNRQANFIKQYYMYTLLNSGDAS
GILDNGDFLAGYNRLALIEFNTDFFGKYDTGEDIFKEITGELDYQYLNLNPLQSVIIFSDKSFTADGNIDKNIEEMFTNI
HDYIYRKTGQFMYIAVSGLFNDYHELPQVMDAVDTLMNNKFYETGRYIFSDNISEDTPVLVQIDDDALMKQMKQDIKMKD
ITFLRIHFDALCKKYRGQSNFSHIYIKFVFSNLLKDFYDNIPGADEAEFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSF
GKEPATSHREIETVKNYIHNHYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNI
SEQVGYPNVSYFVQSFREYFGISPQKFRDQGELS
>Mature_514_residues
MYNILIVDDEKIERSGIRMLLKRMGIELGVFEACNGKQALEYLTSDKNTGIGHIDILLTDVKMPFMDGIELIKNVMHNDI
SLKTIIFSGYNEFEYAKLAVKLGVKDYILKPVDPSEFSSTITGVITELDEEHKKDEDYNRQANFIKQYYMYTLLNSGDAS
GILDNGDFLAGYNRLALIEFNTDFFGKYDTGEDIFKEITGELDYQYLNLNPLQSVIIFSDKSFTADGNIDKNIEEMFTNI
HDYIYRKTGQFMYIAVSGLFNDYHELPQVMDAVDTLMNNKFYETGRYIFSDNISEDTPVLVQIDDDALMKQMKQDIKMKD
ITFLRIHFDALCKKYRGQSNFSHIYIKFVFSNLLKDFYDNIPGADEAEFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSF
GKEPATSHREIETVKNYIHNHYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNI
SEQVGYPNVSYFVQSFREYFGISPQKFRDQGELS

Specific function: Member of the two-component regulatory system yesM/yesN [H]

COG id: COG4753

COG function: function code T; Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789993, Length=94, Percent_Identity=35.1063829787234, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1790391, Length=129, Percent_Identity=28.6821705426357, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1790299, Length=134, Percent_Identity=31.3432835820896, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788550, Length=193, Percent_Identity=27.979274611399, Blast_Score=65, Evalue=9e-12,
Organism=Escherichia coli, GI1787987, Length=94, Percent_Identity=37.2340425531915, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018060
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00165 HTH_AraC; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 59498; Mature: 59498

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNILIVDDEKIERSGIRMLLKRMGIELGVFEACNGKQALEYLTSDKNTGIGHIDILLTD
CEEEEEECCHHHHHHHHHHHHHHCCCCEEEHCCCCCHHHHHHHHCCCCCCCCEEEEEEEC
VKMPFMDGIELIKNVMHNDISLKTIIFSGYNEFEYAKLAVKLGVKDYILKPVDPSEFSST
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHCCCCCHHHHHHH
ITGVITELDEEHKKDEDYNRQANFIKQYYMYTLLNSGDASGILDNGDFLAGYNRLALIEF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEE
NTDFFGKYDTGEDIFKEITGELDYQYLNLNPLQSVIIFSDKSFTADGNIDKNIEEMFTNI
CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
HDYIYRKTGQFMYIAVSGLFNDYHELPQVMDAVDTLMNNKFYETGRYIFSDNISEDTPVL
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCEE
VQIDDDALMKQMKQDIKMKDITFLRIHFDALCKKYRGQSNFSHIYIKFVFSNLLKDFYDN
EEECCHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
IPGADEAEFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSFGKEPATSHREIETVKNYIHN
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
HYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SEQVGYPNVSYFVQSFREYFGISPQKFRDQGELS
HHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCC
>Mature Secondary Structure
MYNILIVDDEKIERSGIRMLLKRMGIELGVFEACNGKQALEYLTSDKNTGIGHIDILLTD
CEEEEEECCHHHHHHHHHHHHHHCCCCEEEHCCCCCHHHHHHHHCCCCCCCCEEEEEEEC
VKMPFMDGIELIKNVMHNDISLKTIIFSGYNEFEYAKLAVKLGVKDYILKPVDPSEFSST
CCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHCHHHHHCCCCCHHHHHHH
ITGVITELDEEHKKDEDYNRQANFIKQYYMYTLLNSGDASGILDNGDFLAGYNRLALIEF
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCEEEEEEE
NTDFFGKYDTGEDIFKEITGELDYQYLNLNPLQSVIIFSDKSFTADGNIDKNIEEMFTNI
CCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHH
HDYIYRKTGQFMYIAVSGLFNDYHELPQVMDAVDTLMNNKFYETGRYIFSDNISEDTPVL
HHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCEE
VQIDDDALMKQMKQDIKMKDITFLRIHFDALCKKYRGQSNFSHIYIKFVFSNLLKDFYDN
EEECCHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC
IPGADEAEFGREIDRLYKSEDFSCIMDIVNNYIDLLEKSFGKEPATSHREIETVKNYIHN
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
HYGEEIGAQQLADMVYLAPSYLSSLFKKETGQNLSKYIKQYRMEKAKELLTGTNMKIVNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
SEQVGYPNVSYFVQSFREYFGISPQKFRDQGELS
HHHCCCCCHHHHHHHHHHHHCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]