| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is hsdM [H]
Identifier: 238917453
GI number: 238917453
Start: 1590229
End: 1592907
Strand: Reverse
Name: hsdM [H]
Synonym: EUBELI_01531
Alternate gene names: 238917453
Gene position: 1592907-1590229 (Counterclockwise)
Preceding gene: 238917454
Following gene: 238917452
Centisome position: 74.29
GC content: 42.37
Gene sequence:
>2679_bases ATGGCTGTCAAGAAAACGCAATTATATGCATCGCTGTGGGCGAGCTGTGATAAACTTCGCGGAGGTATGGATTCCTCAGA GTATAAGGACTATATCCTGACACTTTTATTCATGAAGTATGTCACTGATAAATTTAAGAATAAAGGAGCATATGAAGACA TTAAGGTCTTTGATAAGGCACATGATAAAGATCCAGATCCAGAGAAGCGAACGGGCTGCTCTTTTGACGACTTTATTGCT CTGAAGGGAAAAAAGAACATCGGCGAGGGCATGGATAAAATCATAGCTCGCCTTGCTGACGAGAACACTGACCTGAAGGG TGTTATTGATATTGCTCATTTCAATGATGAGAAGAAGCTGGGAAGCGGTAAAGAAATGGTCGATAAATTGACTGATCTTA TCTCTATCTTCCAGCGTCCGGAACTTGACTTCTCTCGAAACAAGGCAGAAGGTGATGACATCATCGGCGATGCCTACGAG TATCTAATGCGTAAATTCGCTACAGAGAGCGGAAAGAGCAAGGGACAATTCTATACGCCTGCAGAGGTTTCCAGAATTCT TGCTAATGTAGTAGGCATTAGTCACTGCACGGATGCTAGCGCCACGGTATGCGATCCGGCTTGTGGTAGTGGTAGTTTGT TGATTCGAGCTATCGATGCAGCGCCATTTCCAATTATGGGTTATGGTCAGGAAAAAGAAAGCACAACAGCTGGTCTTGCT AAGATGAATGCTGTTCTGCACCGTAAGGCTGAAATTATCATCAAGAGCGGTAATACATTCTCAAATCCGCAGTATATGGA TAAATCGGATAACTCCGTACTTGAGCGTTTTGATTACATAGTGGCAAATCCGCCTTTTTCCATGAAAAACTGGCGCGATG GAATTGCCGGTAAAGAATATGGTCGGTTTGAGGGCTATGGGGATATGCCTCCGGAAAAGAACGGAGACTATGCTTGGCTT ATGCATATTCTTAAAACTCTAAAGTCAAATGGTAAGGCTGCGGTTATTTTGCCTCATGGAGTCCTCTTCCGTGGAAATGC AGAGGCTACCATCAGAGAAACTATTATAAAGAAACATTGGATCAAGGGCATTATTAGCCTTCCGGCAAACTTGTTTTATG GCACTGGAATAGCTGCATGTGTACTCGTGATTGATAAAGAAGGTGCTGCAAACCGACAGGGCATCTTTATGATTGATGCT AGCCGTGGGTATGTTAAGGATGGCAATAAGAATCGTTTGAGAGAACGCGATATCTACAGAATCATTACTACCTTTAATGA GCAGATTACTACAGATCCTAAGTATGCGCGTTTCGTACCCAATGATGAAATTGAAAAGAAGAATGAGTATAACCTGAACA TCACCCGATATATTGACTCCACAGATCCGGAGGATATTCAGGATATTTATGCCCATATTCATGGCGGCATTCCTGCGATT GACATCGATGGTCTATCTAAATACTGGAAAGTATTTCCTTCGCTGAAATCAGAGCTGCTGTCAGCTATTAGCGAAAAATA CTACAGCTTGAATGTTGAGCACGAAAGTATTCGACAAACGATATATAAAAATACTGAATTCTCGAAGTATGGTGAGAAAC TCGATGAGGCATTTGCTGCATGGAAGGCAAAAGAATATCCGGTTCTTTCTGCCCTTAATGAAGAAGTGGTTGCAAGAGAG CTGATTGTAAGTCTTGCTAAAGATATCATTGCCGAATTTGAACACCTGACACTGATTGACAAATATGATGTATATCAGGT GTTGCTGGCCTATTGGAATGAGGTCATGAACGATGATGTGTCGCTTATCATAAGCGAATCGGATGGCTACACCAACGCCA GAGCGACAGACAATATCGAGGAAGAGATTACGCAGGGAAAGAATAAGGGTGAAATGAAGGTCATCGGATGGGAAGGTCGT TTGCTCCCGAAATCTATTGTAGTAGATGCCTTTTTCCGTGAAGAGAAGAATGCCATAGAAGAAGCCGAGAGCATTATTGA CGAGACGGAAGTTCGGCTTTCTGATCTGATTGAAAGTGCGGACGAAGAATCTGCTCTTGCTGATGTGGTTGAGAACGGGA AAGTTAAAGCGAAGGATATCGAAGCCAAAATAGTTGAGTTGACAAGCACGATTGAAACAGAAGAAACCATAGAGCTCGAA GTGATCCGCATGGATCTCCAGTTTGTCAATACAAAGAAGCGGCTGGAAGCGTATCTTGTGGGGCATCCGCTTTGCAAGAG TGCAGTCAACGAAAATGGAAAAATTACAAAGAGCTCTATTGACTATCGGTTACGTATTATTCGTACAGAAGAATGCATAC CTGAGAGCTTGCAGGATGACGTAAACCAGTTGAAGGCAGCTTTAGATCTTTGTGGCAAGGTGTCAGATTACAATAAGGTT GTCAAAGAGCTGAACAAGGCTCTGGATGAAAAGTGCCGGGCAAGATATGAAAAATTTACAGATAACGAAATTCTAGATCT GCTTGTGAACAAAAAGTGGTTTGATAGCATTTTCTTTGGAATCAGTGATTTGTATACTGCGATTTCCCATCGTTTGACGA GTAGGATTATTGAACTTTCTGAGAGATACGAGGATACACTGCCGGAGCTTGACAAAGTCACTACTGAATATGAGGCAAAG GTAAAGTCTCATCTTGAAAGGATGGGATTCAAATGGTAA
Upstream 100 bases:
>100_bases TTAAAATTTCCGAACTTGATGAATGGGTTAAGAGCGGTAAAAGCGCTGACTGATTCATGAGGAAAATCAAAGAAAATCAT TAGACAAGGAGCAGACAAAG
Downstream 100 bases:
>100_bases ATGCAATTTTAAGAACATATATTCCTGATGATTGGAGTGTAATCACGTTAGGAAATTATGCACAGATTTTTAGAGGCGGC TCACCAAGACCTATTCAAGC
Product: type I restriction enzyme M protein
Products: NA
Alternate protein names: M.EcoR124II [H]
Number of amino acids: Translated: 892; Mature: 891
Protein sequence:
>892_residues MAVKKTQLYASLWASCDKLRGGMDSSEYKDYILTLLFMKYVTDKFKNKGAYEDIKVFDKAHDKDPDPEKRTGCSFDDFIA LKGKKNIGEGMDKIIARLADENTDLKGVIDIAHFNDEKKLGSGKEMVDKLTDLISIFQRPELDFSRNKAEGDDIIGDAYE YLMRKFATESGKSKGQFYTPAEVSRILANVVGISHCTDASATVCDPACGSGSLLIRAIDAAPFPIMGYGQEKESTTAGLA KMNAVLHRKAEIIIKSGNTFSNPQYMDKSDNSVLERFDYIVANPPFSMKNWRDGIAGKEYGRFEGYGDMPPEKNGDYAWL MHILKTLKSNGKAAVILPHGVLFRGNAEATIRETIIKKHWIKGIISLPANLFYGTGIAACVLVIDKEGAANRQGIFMIDA SRGYVKDGNKNRLRERDIYRIITTFNEQITTDPKYARFVPNDEIEKKNEYNLNITRYIDSTDPEDIQDIYAHIHGGIPAI DIDGLSKYWKVFPSLKSELLSAISEKYYSLNVEHESIRQTIYKNTEFSKYGEKLDEAFAAWKAKEYPVLSALNEEVVARE LIVSLAKDIIAEFEHLTLIDKYDVYQVLLAYWNEVMNDDVSLIISESDGYTNARATDNIEEEITQGKNKGEMKVIGWEGR LLPKSIVVDAFFREEKNAIEEAESIIDETEVRLSDLIESADEESALADVVENGKVKAKDIEAKIVELTSTIETEETIELE VIRMDLQFVNTKKRLEAYLVGHPLCKSAVNENGKITKSSIDYRLRIIRTEECIPESLQDDVNQLKAALDLCGKVSDYNKV VKELNKALDEKCRARYEKFTDNEILDLLVNKKWFDSIFFGISDLYTAISHRLTSRIIELSERYEDTLPELDKVTTEYEAK VKSHLERMGFKW
Sequences:
>Translated_892_residues MAVKKTQLYASLWASCDKLRGGMDSSEYKDYILTLLFMKYVTDKFKNKGAYEDIKVFDKAHDKDPDPEKRTGCSFDDFIA LKGKKNIGEGMDKIIARLADENTDLKGVIDIAHFNDEKKLGSGKEMVDKLTDLISIFQRPELDFSRNKAEGDDIIGDAYE YLMRKFATESGKSKGQFYTPAEVSRILANVVGISHCTDASATVCDPACGSGSLLIRAIDAAPFPIMGYGQEKESTTAGLA KMNAVLHRKAEIIIKSGNTFSNPQYMDKSDNSVLERFDYIVANPPFSMKNWRDGIAGKEYGRFEGYGDMPPEKNGDYAWL MHILKTLKSNGKAAVILPHGVLFRGNAEATIRETIIKKHWIKGIISLPANLFYGTGIAACVLVIDKEGAANRQGIFMIDA SRGYVKDGNKNRLRERDIYRIITTFNEQITTDPKYARFVPNDEIEKKNEYNLNITRYIDSTDPEDIQDIYAHIHGGIPAI DIDGLSKYWKVFPSLKSELLSAISEKYYSLNVEHESIRQTIYKNTEFSKYGEKLDEAFAAWKAKEYPVLSALNEEVVARE LIVSLAKDIIAEFEHLTLIDKYDVYQVLLAYWNEVMNDDVSLIISESDGYTNARATDNIEEEITQGKNKGEMKVIGWEGR LLPKSIVVDAFFREEKNAIEEAESIIDETEVRLSDLIESADEESALADVVENGKVKAKDIEAKIVELTSTIETEETIELE VIRMDLQFVNTKKRLEAYLVGHPLCKSAVNENGKITKSSIDYRLRIIRTEECIPESLQDDVNQLKAALDLCGKVSDYNKV VKELNKALDEKCRARYEKFTDNEILDLLVNKKWFDSIFFGISDLYTAISHRLTSRIIELSERYEDTLPELDKVTTEYEAK VKSHLERMGFKW >Mature_891_residues AVKKTQLYASLWASCDKLRGGMDSSEYKDYILTLLFMKYVTDKFKNKGAYEDIKVFDKAHDKDPDPEKRTGCSFDDFIAL KGKKNIGEGMDKIIARLADENTDLKGVIDIAHFNDEKKLGSGKEMVDKLTDLISIFQRPELDFSRNKAEGDDIIGDAYEY LMRKFATESGKSKGQFYTPAEVSRILANVVGISHCTDASATVCDPACGSGSLLIRAIDAAPFPIMGYGQEKESTTAGLAK MNAVLHRKAEIIIKSGNTFSNPQYMDKSDNSVLERFDYIVANPPFSMKNWRDGIAGKEYGRFEGYGDMPPEKNGDYAWLM HILKTLKSNGKAAVILPHGVLFRGNAEATIRETIIKKHWIKGIISLPANLFYGTGIAACVLVIDKEGAANRQGIFMIDAS RGYVKDGNKNRLRERDIYRIITTFNEQITTDPKYARFVPNDEIEKKNEYNLNITRYIDSTDPEDIQDIYAHIHGGIPAID IDGLSKYWKVFPSLKSELLSAISEKYYSLNVEHESIRQTIYKNTEFSKYGEKLDEAFAAWKAKEYPVLSALNEEVVAREL IVSLAKDIIAEFEHLTLIDKYDVYQVLLAYWNEVMNDDVSLIISESDGYTNARATDNIEEEITQGKNKGEMKVIGWEGRL LPKSIVVDAFFREEKNAIEEAESIIDETEVRLSDLIESADEESALADVVENGKVKAKDIEAKIVELTSTIETEETIELEV IRMDLQFVNTKKRLEAYLVGHPLCKSAVNENGKITKSSIDYRLRIIRTEECIPESLQDDVNQLKAALDLCGKVSDYNKVV KELNKALDEKCRARYEKFTDNEILDLLVNKKWFDSIFFGISDLYTAISHRLTSRIIELSERYEDTLPELDKVTTEYEAKV KSHLERMGFKW
Specific function: Methylation of specific adenine residues; required for both restriction and modification activities. The EcoR124/3 I enzyme recognizes 5'-GAAN(7)RTCG-3' [H]
COG id: COG0286
COG function: function code V; Type I restriction-modification system methyltransferase subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1790808, Length=409, Percent_Identity=26.4058679706601, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022749 - InterPro: IPR003356 - InterPro: IPR002052 - InterPro: IPR002296 - InterPro: IPR004546 [H]
Pfam domain/function: PF12161 HsdM_N; PF02384 N6_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 101060; Mature: 100929
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVKKTQLYASLWASCDKLRGGMDSSEYKDYILTLLFMKYVTDKFKNKGAYEDIKVFDKA CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HDKDPDPEKRTGCSFDDFIALKGKKNIGEGMDKIIARLADENTDLKGVIDIAHFNDEKKL CCCCCCCCHHCCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHC GSGKEMVDKLTDLISIFQRPELDFSRNKAEGDDIIGDAYEYLMRKFATESGKSKGQFYTP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH AEVSRILANVVGISHCTDASATVCDPACGSGSLLIRAIDAAPFPIMGYGQEKESTTAGLA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH KMNAVLHRKAEIIIKSGNTFSNPQYMDKSDNSVLERFDYIVANPPFSMKNWRDGIAGKEY HHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHCCCCCCCC GRFEGYGDMPPEKNGDYAWLMHILKTLKSNGKAAVILPHGVLFRGNAEATIRETIIKKHW CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH IKGIISLPANLFYGTGIAACVLVIDKEGAANRQGIFMIDASRGYVKDGNKNRLRERDIYR HHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH IITTFNEQITTDPKYARFVPNDEIEKKNEYNLNITRYIDSTDPEDIQDIYAHIHGGIPAI HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE DIDGLSKYWKVFPSLKSELLSAISEKYYSLNVEHESIRQTIYKNTEFSKYGEKLDEAFAA EHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH WKAKEYPVLSALNEEVVARELIVSLAKDIIAEFEHLTLIDKYDVYQVLLAYWNEVMNDDV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHCCCCE SLIISESDGYTNARATDNIEEEITQGKNKGEMKVIGWEGRLLPKSIVVDAFFREEKNAIE EEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH EAESIIDETEVRLSDLIESADEESALADVVENGKVKAKDIEAKIVELTSTIETEETIELE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCEEEE VIRMDLQFVNTKKRLEAYLVGHPLCKSAVNENGKITKSSIDYRLRIIRTEECIPESLQDD EEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCEEEEEEECHHHCHHHHHHH VNQLKAALDLCGKVSDYNKVVKELNKALDEKCRARYEKFTDNEILDLLVNKKWFDSIFFG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHH ISDLYTAISHRLTSRIIELSERYEDTLPELDKVTTEYEAKVKSHLERMGFKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AVKKTQLYASLWASCDKLRGGMDSSEYKDYILTLLFMKYVTDKFKNKGAYEDIKVFDKA CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH HDKDPDPEKRTGCSFDDFIALKGKKNIGEGMDKIIARLADENTDLKGVIDIAHFNDEKKL CCCCCCCCHHCCCCHHHEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHC GSGKEMVDKLTDLISIFQRPELDFSRNKAEGDDIIGDAYEYLMRKFATESGKSKGQFYTP CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCH AEVSRILANVVGISHCTDASATVCDPACGSGSLLIRAIDAAPFPIMGYGQEKESTTAGLA HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH KMNAVLHRKAEIIIKSGNTFSNPQYMDKSDNSVLERFDYIVANPPFSMKNWRDGIAGKEY HHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCHHCCCCCCCC GRFEGYGDMPPEKNGDYAWLMHILKTLKSNGKAAVILPHGVLFRGNAEATIRETIIKKHW CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHH IKGIISLPANLFYGTGIAACVLVIDKEGAANRQGIFMIDASRGYVKDGNKNRLRERDIYR HHHHHHCCHHHHHHCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH IITTFNEQITTDPKYARFVPNDEIEKKNEYNLNITRYIDSTDPEDIQDIYAHIHGGIPAI HHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEE DIDGLSKYWKVFPSLKSELLSAISEKYYSLNVEHESIRQTIYKNTEFSKYGEKLDEAFAA EHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHH WKAKEYPVLSALNEEVVARELIVSLAKDIIAEFEHLTLIDKYDVYQVLLAYWNEVMNDDV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHCCCCE SLIISESDGYTNARATDNIEEEITQGKNKGEMKVIGWEGRLLPKSIVVDAFFREEKNAIE EEEEECCCCCCCCCCCCCHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH EAESIIDETEVRLSDLIESADEESALADVVENGKVKAKDIEAKIVELTSTIETEETIELE HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCCEEEE VIRMDLQFVNTKKRLEAYLVGHPLCKSAVNENGKITKSSIDYRLRIIRTEECIPESLQDD EEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCCEEEEEEECHHHCHHHHHHH VNQLKAALDLCGKVSDYNKVVKELNKALDEKCRARYEKFTDNEILDLLVNKKWFDSIFFG HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHH ISDLYTAISHRLTSRIIELSERYEDTLPELDKVTTEYEAKVKSHLERMGFKW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2784505 [H]