| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238917452
Identifier: 238917452
GI number: 238917452
Start: 1588985
End: 1590235
Strand: Reverse
Name: 238917452
Synonym: EUBELI_01530
Alternate gene names: NA
Gene position: 1590235-1588985 (Counterclockwise)
Preceding gene: 238917453
Following gene: 238917451
Centisome position: 74.16
GC content: 37.89
Gene sequence:
>1251_bases ATGGTAAATGCAATTTTAAGAACATATATTCCTGATGATTGGAGTGTAATCACGTTAGGAAATTATGCACAGATTTTTAG AGGCGGCTCACCAAGACCTATTCAAGCATTTTTGACGACAAGTGATCAAGGTGTTAATTGGATAAAAATTGGCGACGTAG GTGAGGAAGATAAATTCATAAAATCAACTGAAGAAAAAATCGTACCAGAGGGAGTTTCATGTTCTAGAATGGTATTCAGA GGTGATCTTATTCTCTCTAATTCGATGAGCTATGGACGTCCATATATCATGAATATCGAGGGTTGCATTCATGATGGTTG GCTCGTCATTCAAAAATATGACAGAGTCTTTGATAGAGACTATTTGTATTATGCGCTTAGTTCGGGTTTGACAATGAAAC AGTATGTTGCAATGGCAGCTGGGAGCAGTGTTCAGAACCTAAATAAGGAGAAAGTTTCAAAAGTAGTTCTACCTTGTCCA AGGATATCTGAACAAAAATCAATAGCAGAAGTTTTATCGGATATAGATACACTAATTATAGATTTGAAAAAAATTATTCG TAAGAAAAAAGATATTCGCCAAGGAACAATGCAAATGCTTGTAACTGGAAAGAAACGATTAAGTGGATTTGATGGAAACT GGAGAGTGACGACTCTAGATCGGCTCTGCTATATAGTGACAAAGCAAACAGGATTTGATTATAGCGCAGAGATTAAGCCG TCGCTTGTGACTACACCACAAATTGGAACCATCCCATTCATTCAAAATAAGGATTTTGAGGCGTTTGATATCAATTACAA TACAGACTTTTTCATTCCCTATGATGTAGCAGAAAAGTATCCCAGGATCCTTCTGAATGAGGTGTGTCTACTGATATCAA TTTCAGGGCGCATAGGAAACGTTGCAATCTTTGATAATGAGCAGACTTCGTTCGCTGGAGGAGCGGTTGGTATTGCAAAA CTGTATGAGCCTGAATTGGCAAGTTGGTGCATGCTGTATTTGTCTAGCAAGGACGGACAAGAGCAGATTTTCTCCAATGA AAAAGTTGGAGCACAGCATAATTTGACGGTAGCTGATGTCCGAAAACTCGAAATCAAGATGCCTGCAAAGTCAGAGAGAG AAGCTATTATCAAAGTTTTAACGGATATGAATGATGAAATCGAAGTCCTTGAAGAAAAATTAGATAAGTATCAAAAAATC AAACAAGGTATGATGGACGAATTGCTGACCGGCAAGGTCAGGTTAGTGTAA
Upstream 100 bases:
>100_bases AACTTTCTGAGAGATACGAGGATACACTGCCGGAGCTTGACAAAGTCACTACTGAATATGAGGCAAAGGTAAAGTCTCAT CTTGAAAGGATGGGATTCAA
Downstream 100 bases:
>100_bases GGAGGTGCCTGTCAGATGAGTATTGGTGATGCCGAAATTAAAACACAGGAAAGAGTGATCCGTTTCTTTAAAGAACCGGA GATCTTGGGCTACCAGTATA
Product: type I restriction enzyme
Products: NA
Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]
Number of amino acids: Translated: 416; Mature: 416
Protein sequence:
>416_residues MVNAILRTYIPDDWSVITLGNYAQIFRGGSPRPIQAFLTTSDQGVNWIKIGDVGEEDKFIKSTEEKIVPEGVSCSRMVFR GDLILSNSMSYGRPYIMNIEGCIHDGWLVIQKYDRVFDRDYLYYALSSGLTMKQYVAMAAGSSVQNLNKEKVSKVVLPCP RISEQKSIAEVLSDIDTLIIDLKKIIRKKKDIRQGTMQMLVTGKKRLSGFDGNWRVTTLDRLCYIVTKQTGFDYSAEIKP SLVTTPQIGTIPFIQNKDFEAFDINYNTDFFIPYDVAEKYPRILLNEVCLLISISGRIGNVAIFDNEQTSFAGGAVGIAK LYEPELASWCMLYLSSKDGQEQIFSNEKVGAQHNLTVADVRKLEIKMPAKSEREAIIKVLTDMNDEIEVLEEKLDKYQKI KQGMMDELLTGKVRLV
Sequences:
>Translated_416_residues MVNAILRTYIPDDWSVITLGNYAQIFRGGSPRPIQAFLTTSDQGVNWIKIGDVGEEDKFIKSTEEKIVPEGVSCSRMVFR GDLILSNSMSYGRPYIMNIEGCIHDGWLVIQKYDRVFDRDYLYYALSSGLTMKQYVAMAAGSSVQNLNKEKVSKVVLPCP RISEQKSIAEVLSDIDTLIIDLKKIIRKKKDIRQGTMQMLVTGKKRLSGFDGNWRVTTLDRLCYIVTKQTGFDYSAEIKP SLVTTPQIGTIPFIQNKDFEAFDINYNTDFFIPYDVAEKYPRILLNEVCLLISISGRIGNVAIFDNEQTSFAGGAVGIAK LYEPELASWCMLYLSSKDGQEQIFSNEKVGAQHNLTVADVRKLEIKMPAKSEREAIIKVLTDMNDEIEVLEEKLDKYQKI KQGMMDELLTGKVRLV >Mature_416_residues MVNAILRTYIPDDWSVITLGNYAQIFRGGSPRPIQAFLTTSDQGVNWIKIGDVGEEDKFIKSTEEKIVPEGVSCSRMVFR GDLILSNSMSYGRPYIMNIEGCIHDGWLVIQKYDRVFDRDYLYYALSSGLTMKQYVAMAAGSSVQNLNKEKVSKVVLPCP RISEQKSIAEVLSDIDTLIIDLKKIIRKKKDIRQGTMQMLVTGKKRLSGFDGNWRVTTLDRLCYIVTKQTGFDYSAEIKP SLVTTPQIGTIPFIQNKDFEAFDINYNTDFFIPYDVAEKYPRILLNEVCLLISISGRIGNVAIFDNEQTSFAGGAVGIAK LYEPELASWCMLYLSSKDGQEQIFSNEKVGAQHNLTVADVRKLEIKMPAKSEREAIIKVLTDMNDEIEVLEEKLDKYQKI KQGMMDELLTGKVRLV
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 47067; Mature: 47067
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNAILRTYIPDDWSVITLGNYAQIFRGGSPRPIQAFLTTSDQGVNWIKIGDVGEEDKFI CCCCHHHHHCCCCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHH KSTEEKIVPEGVSCSRMVFRGDLILSNSMSYGRPYIMNIEGCIHDGWLVIQKYDRVFDRD HHHHHHHCCCCCCCCEEEEECCEEEECCCCCCCCEEEEECCEECCCEEEEEHHHHHHCCC YLYYALSSGLTMKQYVAMAAGSSVQNLNKEKVSKVVLPCPRISEQKSIAEVLSDIDTLII CEEEHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH DLKKIIRKKKDIRQGTMQMLVTGKKRLSGFDGNWRVTTLDRLCYIVTKQTGFDYSAEIKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHEEEEEEECCCCCCCCCCCC SLVTTPQIGTIPFIQNKDFEAFDINYNTDFFIPYDVAEKYPRILLNEVCLLISISGRIGN CEECCCCCCCCCEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHEEEEEEECCCCCE VAIFDNEQTSFAGGAVGIAKLYEPELASWCMLYLSSKDGQEQIFSNEKVGAQHNLTVADV EEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHE RKLEIKMPAKSEREAIIKVLTDMNDEIEVLEEKLDKYQKIKQGMMDELLTGKVRLV EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC >Mature Secondary Structure MVNAILRTYIPDDWSVITLGNYAQIFRGGSPRPIQAFLTTSDQGVNWIKIGDVGEEDKFI CCCCHHHHHCCCCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCCCHHH KSTEEKIVPEGVSCSRMVFRGDLILSNSMSYGRPYIMNIEGCIHDGWLVIQKYDRVFDRD HHHHHHHCCCCCCCCEEEEECCEEEECCCCCCCCEEEEECCEECCCEEEEEHHHHHHCCC YLYYALSSGLTMKQYVAMAAGSSVQNLNKEKVSKVVLPCPRISEQKSIAEVLSDIDTLII CEEEHHHCCCHHHHHHHHHCCCHHHHCCHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHH DLKKIIRKKKDIRQGTMQMLVTGKKRLSGFDGNWRVTTLDRLCYIVTKQTGFDYSAEIKP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHEEEEEEECCCCCCCCCCCC SLVTTPQIGTIPFIQNKDFEAFDINYNTDFFIPYDVAEKYPRILLNEVCLLISISGRIGN CEECCCCCCCCCEEECCCCEEEEECCCCCEEEEHHHHHHHHHHHHHHEEEEEEECCCCCE VAIFDNEQTSFAGGAVGIAKLYEPELASWCMLYLSSKDGQEQIFSNEKVGAQHNLTVADV EEEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHE RKLEIKMPAKSEREAIIKVLTDMNDEIEVLEEKLDKYQKIKQGMMDELLTGKVRLV EEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]