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The map label for this gene is ygfM [C]

Identifier: 238917417

GI number: 238917417

Start: 1551799

End: 1552593

Strand: Reverse

Name: ygfM [C]

Synonym: EUBELI_01495

Alternate gene names: 238917417

Gene position: 1552593-1551799 (Counterclockwise)

Preceding gene: 238917418

Following gene: 238917416

Centisome position: 72.41

GC content: 38.99

Gene sequence:

>795_bases
ATGCTTACTATACAGAATTATAAGAAAGTAGAAAGCCTTGAAGAAGCCTATGAGCTTAATCAGAAGAAAGCTAACCGTAT
TGTCGGCGGCATGATGTGGATGCGTATGGGCGACAACAGAATGAATACAGCTATTGATATGTCAGGGCTTGGACTTGATA
AGATTGAAGAATCAGATGAAGAATTTAAGATTGGCTGTATGACTACTTTAAGACAGTTAGAAGTTCATGAGAGTTTTAAT
GAATATACAGATGGCTGTGCTAAGGAGGCTTTAAGGCATATTGTAGGTGTGCAGTTCAGAAATCTTGCAACAGTTGGTGG
AAGTATATATGGAAGATATGGATTTTCTGATGTGCTTACGCTTTTAATCGGACTGGATTCTTATGTAGAACTATACAAGG
GAGGCATTGTTCCATTAACTGAGTATGCTGACCGTGATTATGACAGGGACATTGTTGTTAATATTATTGTTAAGAAAAGA
CCGGTGAATATGTTTTATGAAGCAGTGAGAATAACAGAAACAGATCTGCCGGTGCTTACATGTGCAGGAGTAAAGTTTAA
AGATACTGGAGTCTGCAATATCTGCATAGGTGCAAGGCCGGGAAGAGCAATTGTTGTTAAAGATACAGAAGGAATACTTG
CAGGCGGTATTAACGAGAAGTCGGTAGAAGAATTCAGTACATTTGTTAAGAAAAATGTGCCTACAGCGGGCAATATGAGA
GGAAGTGCTGAGTATAGAAGTCATCTTTCAGGCGTTCTTGCAGGCAGGGCACTTCAGAATATTAACAGAGATTAA

Upstream 100 bases:

>100_bases
TAAGCTAAGCTGCCATGAGAGCCATCACCTGCAGGTAACGGGTCTGCGCCCGCCACAACCGTCCGTTGTTCATATCACTA
ATAAATAGATTGGAGTTTTT

Downstream 100 bases:

>100_bases
TTGGTGATTACGGATTGGAGAATATATGTTAGTTGATATTAAGTTGAATGGAAAATCTGTTAAAGCAGATATTACGGCAG
ACATGACACTCTATGAATTC

Product: xanthine dehydrogenase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLTIQNYKKVESLEEAYELNQKKANRIVGGMMWMRMGDNRMNTAIDMSGLGLDKIEESDEEFKIGCMTTLRQLEVHESFN
EYTDGCAKEALRHIVGVQFRNLATVGGSIYGRYGFSDVLTLLIGLDSYVELYKGGIVPLTEYADRDYDRDIVVNIIVKKR
PVNMFYEAVRITETDLPVLTCAGVKFKDTGVCNICIGARPGRAIVVKDTEGILAGGINEKSVEEFSTFVKKNVPTAGNMR
GSAEYRSHLSGVLAGRALQNINRD

Sequences:

>Translated_264_residues
MLTIQNYKKVESLEEAYELNQKKANRIVGGMMWMRMGDNRMNTAIDMSGLGLDKIEESDEEFKIGCMTTLRQLEVHESFN
EYTDGCAKEALRHIVGVQFRNLATVGGSIYGRYGFSDVLTLLIGLDSYVELYKGGIVPLTEYADRDYDRDIVVNIIVKKR
PVNMFYEAVRITETDLPVLTCAGVKFKDTGVCNICIGARPGRAIVVKDTEGILAGGINEKSVEEFSTFVKKNVPTAGNMR
GSAEYRSHLSGVLAGRALQNINRD
>Mature_264_residues
MLTIQNYKKVESLEEAYELNQKKANRIVGGMMWMRMGDNRMNTAIDMSGLGLDKIEESDEEFKIGCMTTLRQLEVHESFN
EYTDGCAKEALRHIVGVQFRNLATVGGSIYGRYGFSDVLTLLIGLDSYVELYKGGIVPLTEYADRDYDRDIVVNIIVKKR
PVNMFYEAVRITETDLPVLTCAGVKFKDTGVCNICIGARPGRAIVVKDTEGILAGGINEKSVEEFSTFVKKNVPTAGNMR
GSAEYRSHLSGVLAGRALQNINRD

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789245, Length=260, Percent_Identity=24.6153846153846, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29386; Mature: 29386

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTIQNYKKVESLEEAYELNQKKANRIVGGMMWMRMGDNRMNTAIDMSGLGLDKIEESDE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCCC
EFKIGCMTTLRQLEVHESFNEYTDGCAKEALRHIVGVQFRNLATVGGSIYGRYGFSDVLT
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH
LLIGLDSYVELYKGGIVPLTEYADRDYDRDIVVNIIVKKRPVNMFYEAVRITETDLPVLT
HHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEE
CAGVKFKDTGVCNICIGARPGRAIVVKDTEGILAGGINEKSVEEFSTFVKKNVPTAGNMR
ECCCEECCCCEEEEEEECCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCC
GSAEYRSHLSGVLAGRALQNINRD
CCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLTIQNYKKVESLEEAYELNQKKANRIVGGMMWMRMGDNRMNTAIDMSGLGLDKIEESDE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHCCCCC
EFKIGCMTTLRQLEVHESFNEYTDGCAKEALRHIVGVQFRNLATVGGSIYGRYGFSDVLT
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCHHHHHH
LLIGLDSYVELYKGGIVPLTEYADRDYDRDIVVNIIVKKRPVNMFYEAVRITETDLPVLT
HHHHHHHHHHHHCCCCCEEHHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCEEE
CAGVKFKDTGVCNICIGARPGRAIVVKDTEGILAGGINEKSVEEFSTFVKKNVPTAGNMR
ECCCEECCCCEEEEEEECCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCC
GSAEYRSHLSGVLAGRALQNINRD
CCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA