| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is lon [H]
Identifier: 238917375
GI number: 238917375
Start: 1504708
End: 1507062
Strand: Reverse
Name: lon [H]
Synonym: EUBELI_01452
Alternate gene names: 238917375
Gene position: 1507062-1504708 (Counterclockwise)
Preceding gene: 238917376
Following gene: 238917374
Centisome position: 70.29
GC content: 37.96
Gene sequence:
>2355_bases ATGAGTAACAAATATGATAGACATTATCCAGCTATTCCATTAAGAAATGTCACTGTTTTTCCGGGGATGGTAATGCACTT TGATGTGAGCAGAAAGAAGTCTGTAAAAGCTGTAGAAGCAAGTATGGCAGCTGATGAACTTATATATCTTGTAACACAGA GAGATTCGCAGGTGAGCGAACCAGGGATAGCAGATTTATATACAGTAGGAACAATTGCTAAGATAAAACAGATAATAAAG ATGCCAGGCAAAATTTTAAGGGTTCAGGTAGAAGGGCTTGAAAAGGCACTTGTAAATAGATTTGAAGAAGCGTCAGGAAT GATGCTTGCTGATGTAAGTGTTATGCAAGGATTTGAGAAGCCTGATAAAATGGTGTCGAGAGCTATAATTGTAGGAATGA GAGAACTTTTGACACAGTATGCACATGTTAATCCGAAGTTTGCAAAGGATACAGTCAAGAGATGGCTTTCTTATAATGAT GCAGAAAAACTGATGACGGAATTTGCTCAGGAATTTATGATGGATTTTGATAAAAGACAGCAGTTTCTGGAGGCAGAAGA CTATGAGCAGATGTATACATTTGCTGCAACATTGCTTGTAAATGAGATAAATGCTTATACTATTAAAGAAGAACTTGGCA ATATTGTAAGAGAAAGAGTAGATAAGAACCAGAAGGATTACATATTAAGAGAAGAACTTGCAGCGATTAATGAAGAACTT GATGGAGGAACCATAACAGAGGCTGAAGAATATGAGGCGGACGTTGAAAAGCTTGATTCACCGCAGTATGTAAAGGATAA GCTAAAAAGGGAGATTAAGAGACTGAAATCACTTGCTGGTAATAATGCTGAGGCTAATGTTGAGAGAACATATATAGAGA CATGTCTTGAATTACCATGGAATGTGTCGACTGAAGATAACAAAGATATAGATAATGCTGCAAAAGTGCTTGATTCGGAC CACTATGGAATGAAAGATATTAAGGAAAGAATTCTGGAATCACTTGCGGTAAGAAACATAACAGGTAGTGGAAAAGCACC TGTCATATGTCTTGCAGGACCTCCGGGAACAGGTAAGACATCTATAGCAAGATCAGTTGCAAAGGCACTTGGCAAGGAGT ATGTAAGAATCTGTCTGGGTGGTGTAAGAGATGAGGCTGAGATAAGAGGACACAGGAAAACATATATTGGAGCTATGCCT GGAAGAATTATTGAGGGACTTAAGAGTGCCGGAGTTAATAATCCTCTTATGCTTCTTGATGAGATAGATAAGATAAGCAG TGATTATAAGGGCGATACATCAGCTGCACTTCTTGAAGTATTAGACAGCGAACAGAATGTTAATTTTGTCGACCACTATA TAGAGATGCCGGTTGATTTGTCAAATGTGCTTTTTATTGCAACAGCTAATGATCTGTCTAATATAAGCCGTCCATTGCTT GACAGAATGGAAATTATTGAAGTTGGTTCATACACAGCTAATGAAAAGTTTCATATTGCTAAGGAACACCTTATTAAGAA ACAGATTAAAGAGAATGGTCTGCTTGTATCTGATGTAAAGTTCACTGATAAAGTTATAAGAACAATTATTAATTCGTATA CAAGAGAAGCTGGTGTGAGAGGTCTTGAAAGGCAGATTGCAAAGATTGTAAGAAAAGCGGTTAGAGAATTATACAAAGCC GGAGTGTTCACATCTGATGGAACAAGAGATAAGACTGTAAAGAAAACAGTTAATATATCTGATAAGAATATTACAGATTA TCTTGGAAAAGTTAAATACAGACCGGACAAAAAGAATACAAAGGGTGAAGTTGGTATAGTAAGAGGGCTTGCATGGACAC AGGCAGGTGGAGATACTCTTGAGATAGAGGTTATAACAATGCCGGGCAAAGGCGAGTTCAAGCTTACAGGTAACATGGGT GATGTAATGAAAGAATCAGCAAGCATAGCTGTTTCTTATATCAGATCAGTAACAGAAAAAGGCAGATATAAAGTGGATGC TGAATATTTCCAGAATCATGCATTCCATCTTCATATACCAGAGGGTGCAACTCCGAAAGACGGACCTTCTGCTGGCATTA CAATGGCAACGGCAGTATTGTCTGCGGTTACTGGAATTCCTGTAAGAGCAGATGTTGCAATGACTGGAGAGCTTACATTA AGAGGTAAGGTTCTTCCGATAGGAGGTCTTAAAGAAAAGCTTCTTGCAAGTAAGACAGCGGGTATAACAAATGTTTTTGT ACCTCGGGATAACAGGTCGGATGTTGAAGAACTTGACACAGAGATAACTGAAGGGATGAATATAATATATGTGAATAATG CTATTGAAGTATTTGCACAGGCATTAATGCGTTAA
Upstream 100 bases:
>100_bases TAGAATACAGAACGGATGCTGTAAAAAAAGCACAGTAACGAAATTAATTCAGGCGGGCTGTTCATGATGGACGGTCCGTT TTTTAGATAGAGAGGAATAT
Downstream 100 bases:
>100_bases ATGAAAGGAGCAGCGGATTATGGTTATAAAAAAAGTTAATCTGGATATAGTAGTCGGAGTTACAAGTACACTTCCTGAAA CCCCATTTCCGGAGGTTGCA
Product: ATP-dependent Lon protease
Products: NA
Alternate protein names: ATP-dependent protease La [H]
Number of amino acids: Translated: 784; Mature: 783
Protein sequence:
>784_residues MSNKYDRHYPAIPLRNVTVFPGMVMHFDVSRKKSVKAVEASMAADELIYLVTQRDSQVSEPGIADLYTVGTIAKIKQIIK MPGKILRVQVEGLEKALVNRFEEASGMMLADVSVMQGFEKPDKMVSRAIIVGMRELLTQYAHVNPKFAKDTVKRWLSYND AEKLMTEFAQEFMMDFDKRQQFLEAEDYEQMYTFAATLLVNEINAYTIKEELGNIVRERVDKNQKDYILREELAAINEEL DGGTITEAEEYEADVEKLDSPQYVKDKLKREIKRLKSLAGNNAEANVERTYIETCLELPWNVSTEDNKDIDNAAKVLDSD HYGMKDIKERILESLAVRNITGSGKAPVICLAGPPGTGKTSIARSVAKALGKEYVRICLGGVRDEAEIRGHRKTYIGAMP GRIIEGLKSAGVNNPLMLLDEIDKISSDYKGDTSAALLEVLDSEQNVNFVDHYIEMPVDLSNVLFIATANDLSNISRPLL DRMEIIEVGSYTANEKFHIAKEHLIKKQIKENGLLVSDVKFTDKVIRTIINSYTREAGVRGLERQIAKIVRKAVRELYKA GVFTSDGTRDKTVKKTVNISDKNITDYLGKVKYRPDKKNTKGEVGIVRGLAWTQAGGDTLEIEVITMPGKGEFKLTGNMG DVMKESASIAVSYIRSVTEKGRYKVDAEYFQNHAFHLHIPEGATPKDGPSAGITMATAVLSAVTGIPVRADVAMTGELTL RGKVLPIGGLKEKLLASKTAGITNVFVPRDNRSDVEELDTEITEGMNIIYVNNAIEVFAQALMR
Sequences:
>Translated_784_residues MSNKYDRHYPAIPLRNVTVFPGMVMHFDVSRKKSVKAVEASMAADELIYLVTQRDSQVSEPGIADLYTVGTIAKIKQIIK MPGKILRVQVEGLEKALVNRFEEASGMMLADVSVMQGFEKPDKMVSRAIIVGMRELLTQYAHVNPKFAKDTVKRWLSYND AEKLMTEFAQEFMMDFDKRQQFLEAEDYEQMYTFAATLLVNEINAYTIKEELGNIVRERVDKNQKDYILREELAAINEEL DGGTITEAEEYEADVEKLDSPQYVKDKLKREIKRLKSLAGNNAEANVERTYIETCLELPWNVSTEDNKDIDNAAKVLDSD HYGMKDIKERILESLAVRNITGSGKAPVICLAGPPGTGKTSIARSVAKALGKEYVRICLGGVRDEAEIRGHRKTYIGAMP GRIIEGLKSAGVNNPLMLLDEIDKISSDYKGDTSAALLEVLDSEQNVNFVDHYIEMPVDLSNVLFIATANDLSNISRPLL DRMEIIEVGSYTANEKFHIAKEHLIKKQIKENGLLVSDVKFTDKVIRTIINSYTREAGVRGLERQIAKIVRKAVRELYKA GVFTSDGTRDKTVKKTVNISDKNITDYLGKVKYRPDKKNTKGEVGIVRGLAWTQAGGDTLEIEVITMPGKGEFKLTGNMG DVMKESASIAVSYIRSVTEKGRYKVDAEYFQNHAFHLHIPEGATPKDGPSAGITMATAVLSAVTGIPVRADVAMTGELTL RGKVLPIGGLKEKLLASKTAGITNVFVPRDNRSDVEELDTEITEGMNIIYVNNAIEVFAQALMR >Mature_783_residues SNKYDRHYPAIPLRNVTVFPGMVMHFDVSRKKSVKAVEASMAADELIYLVTQRDSQVSEPGIADLYTVGTIAKIKQIIKM PGKILRVQVEGLEKALVNRFEEASGMMLADVSVMQGFEKPDKMVSRAIIVGMRELLTQYAHVNPKFAKDTVKRWLSYNDA EKLMTEFAQEFMMDFDKRQQFLEAEDYEQMYTFAATLLVNEINAYTIKEELGNIVRERVDKNQKDYILREELAAINEELD GGTITEAEEYEADVEKLDSPQYVKDKLKREIKRLKSLAGNNAEANVERTYIETCLELPWNVSTEDNKDIDNAAKVLDSDH YGMKDIKERILESLAVRNITGSGKAPVICLAGPPGTGKTSIARSVAKALGKEYVRICLGGVRDEAEIRGHRKTYIGAMPG RIIEGLKSAGVNNPLMLLDEIDKISSDYKGDTSAALLEVLDSEQNVNFVDHYIEMPVDLSNVLFIATANDLSNISRPLLD RMEIIEVGSYTANEKFHIAKEHLIKKQIKENGLLVSDVKFTDKVIRTIINSYTREAGVRGLERQIAKIVRKAVRELYKAG VFTSDGTRDKTVKKTVNISDKNITDYLGKVKYRPDKKNTKGEVGIVRGLAWTQAGGDTLEIEVITMPGKGEFKLTGNMGD VMKESASIAVSYIRSVTEKGRYKVDAEYFQNHAFHLHIPEGATPKDGPSAGITMATAVLSAVTGIPVRADVAMTGELTLR GKVLPIGGLKEKLLASKTAGITNVFVPRDNRSDVEELDTEITEGMNIIYVNNAIEVFAQALMR
Specific function: ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced
COG id: COG0466
COG function: function code O; ATP-dependent Lon protease, bacterial type
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Lon domain [H]
Homologues:
Organism=Homo sapiens, GI21396489, Length=613, Percent_Identity=41.4355628058728, Blast_Score=491, Evalue=1e-139, Organism=Homo sapiens, GI31377667, Length=555, Percent_Identity=45.045045045045, Blast_Score=477, Evalue=1e-134, Organism=Escherichia coli, GI1786643, Length=780, Percent_Identity=44.1025641025641, Blast_Score=650, Evalue=0.0, Organism=Caenorhabditis elegans, GI17505831, Length=637, Percent_Identity=38.3045525902669, Blast_Score=454, Evalue=1e-127, Organism=Caenorhabditis elegans, GI17556486, Length=528, Percent_Identity=40.1515151515151, Blast_Score=408, Evalue=1e-114, Organism=Saccharomyces cerevisiae, GI6319449, Length=654, Percent_Identity=39.2966360856269, Blast_Score=457, Evalue=1e-129, Organism=Drosophila melanogaster, GI24666867, Length=622, Percent_Identity=42.443729903537, Blast_Score=503, Evalue=1e-142, Organism=Drosophila melanogaster, GI221513036, Length=622, Percent_Identity=42.443729903537, Blast_Score=503, Evalue=1e-142,
Paralogues:
None
Copy number: 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR003959 - InterPro: IPR008269 - InterPro: IPR004815 - InterPro: IPR003111 - InterPro: IPR008268 - InterPro: IPR001984 - InterPro: IPR015947 - InterPro: IPR020568 [H]
Pfam domain/function: PF00004 AAA; PF02190 LON; PF05362 Lon_C [H]
EC number: =3.4.21.53 [H]
Molecular weight: Translated: 87321; Mature: 87190
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS01046 LON_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKYDRHYPAIPLRNVTVFPGMVMHFDVSRKKSVKAVEASMAADELIYLVTQRDSQVSE CCCCCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCC PGIADLYTVGTIAKIKQIIKMPGKILRVQVEGLEKALVNRFEEASGMMLADVSVMQGFEK CCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCC PDKMVSRAIIVGMRELLTQYAHVNPKFAKDTVKRWLSYNDAEKLMTEFAQEFMMDFDKRQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QFLEAEDYEQMYTFAATLLVNEINAYTIKEELGNIVRERVDKNQKDYILREELAAINEEL HHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC DGGTITEAEEYEADVEKLDSPQYVKDKLKREIKRLKSLAGNNAEANVERTYIETCLELPW CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC NVSTEDNKDIDNAAKVLDSDHYGMKDIKERILESLAVRNITGSGKAPVICLAGPPGTGKT CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH SIARSVAKALGKEYVRICLGGVRDEAEIRGHRKTYIGAMPGRIIEGLKSAGVNNPLMLLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEECCCCHHHHHHHHHCCCCCCCHHHH EIDKISSDYKGDTSAALLEVLDSEQNVNFVDHYIEMPVDLSNVLFIATANDLSNISRPLL HHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH DRMEIIEVGSYTANEKFHIAKEHLIKKQIKENGLLVSDVKFTDKVIRTIINSYTREAGVR HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH GLERQIAKIVRKAVRELYKAGVFTSDGTRDKTVKKTVNISDKNITDYLGKVKYRPDKKNT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCEECCCCCCC KGEVGIVRGLAWTQAGGDTLEIEVITMPGKGEFKLTGNMGDVMKESASIAVSYIRSVTEK CCCEEEEECEEEECCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHC GRYKVDAEYFQNHAFHLHIPEGATPKDGPSAGITMATAVLSAVTGIPVRADVAMTGELTL CCEEEEHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEECCEEE RGKVLPIGGLKEKLLASKTAGITNVFVPRDNRSDVEELDTEITEGMNIIYVNNAIEVFAQ EEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHH ALMR HHCC >Mature Secondary Structure SNKYDRHYPAIPLRNVTVFPGMVMHFDVSRKKSVKAVEASMAADELIYLVTQRDSQVSE CCCCCCCCCCCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCC PGIADLYTVGTIAKIKQIIKMPGKILRVQVEGLEKALVNRFEEASGMMLADVSVMQGFEK CCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCC PDKMVSRAIIVGMRELLTQYAHVNPKFAKDTVKRWLSYNDAEKLMTEFAQEFMMDFDKRQ HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH QFLEAEDYEQMYTFAATLLVNEINAYTIKEELGNIVRERVDKNQKDYILREELAAINEEL HHHCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC DGGTITEAEEYEADVEKLDSPQYVKDKLKREIKRLKSLAGNNAEANVERTYIETCLELPW CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC NVSTEDNKDIDNAAKVLDSDHYGMKDIKERILESLAVRNITGSGKAPVICLAGPPGTGKT CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHH SIARSVAKALGKEYVRICLGGVRDEAEIRGHRKTYIGAMPGRIIEGLKSAGVNNPLMLLD HHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHEECCCCHHHHHHHHHCCCCCCCHHHH EIDKISSDYKGDTSAALLEVLDSEQNVNFVDHYIEMPVDLSNVLFIATANDLSNISRPLL HHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHH DRMEIIEVGSYTANEKFHIAKEHLIKKQIKENGLLVSDVKFTDKVIRTIINSYTREAGVR HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHH GLERQIAKIVRKAVRELYKAGVFTSDGTRDKTVKKTVNISDKNITDYLGKVKYRPDKKNT HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEECCCCCHHHHHHHCCEECCCCCCC KGEVGIVRGLAWTQAGGDTLEIEVITMPGKGEFKLTGNMGDVMKESASIAVSYIRSVTEK CCCEEEEECEEEECCCCCEEEEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHC GRYKVDAEYFQNHAFHLHIPEGATPKDGPSAGITMATAVLSAVTGIPVRADVAMTGELTL CCEEEEHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECEEEECCEEE RGKVLPIGGLKEKLLASKTAGITNVFVPRDNRSDVEELDTEITEGMNIIYVNNAIEVFAQ EEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEECCHHHHHHH ALMR HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA