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The map label for this gene is recO [H]

Identifier: 238917281

GI number: 238917281

Start: 1392623

End: 1393366

Strand: Reverse

Name: recO [H]

Synonym: EUBELI_01356

Alternate gene names: 238917281

Gene position: 1393366-1392623 (Counterclockwise)

Preceding gene: 238917282

Following gene: 238917280

Centisome position: 64.98

GC content: 39.92

Gene sequence:

>744_bases
ATGGCGGAGGTTACTACTGTTACAGGCATGATACTTTCCGCCATGCCTGTCGGTGAATATGACAGAAGACTGGTTATACT
GACTAAGGAGTATGGCAAGATAACGGTATTTGCGAAAGGTGCGAGAAAGCCTAATAGCACACTGATTGGTGTTACGAGAA
GCTTTATATTTGGAACATTTGAGGTGTACCGTGGACGCGAATCATATACGATGTATAAAGCATCGGCTAAGGAGTACTTT
GAAAATGTGGTAAATGACCTTAATGCCGTGTGCTACGCCTGCTATTTTGCTGAGATTGCAGATTATTATGGCAGGGAGAA
TCTTGATGCATCAGAAATGATTAATCTGCTCTATATTACTCTTAAGGCATTGGGCAGAGGTGCTGTCAGTCATGAGCTTA
TAAGATTCATATACGAGATAAGAATGGTTGCGGTTAATGGTGAGTGTCCTGATTTCTTCACATGCCACGAGTGTGGCAGA
GAAGATAATCTGTATGTATATTCGTATTCAAGAAACGGACTATGTTGTAAGAATTGTGCCACAAATGTATATGATGGAAT
TACACTTTCAGGTTCGACGGTATATACACTACAGTATATTGTCACAGCACAGCTTAACAGGCTGTATTCATTTACAGTTA
CAAAGGAAGTTCAGGAAGAATTAAGGCTTGTGGTGAACAGGCTGGAAAGCATTGTGTTTGATAAAGAATTTAAGTCGAAG
GAAATGCTTAATCTGACCATATAA

Upstream 100 bases:

>100_bases
GGTAAAAGTTAAGAAGGAATGGCGCGACAGTGATATTCTTCTTAAGAACTTCGGATATGACAAGAAGAAGGACAAATAAT
ATACATGACAGGAGGGTGCG

Downstream 100 bases:

>100_bases
ATATTACATAAACTGGCTATGTTATCATATGCCAGTTTTTTGTATATTAAAAGATAAAGATTTTATGTGTGGACTGCAGT
CAGATTATGGCAGAATTGTC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAEVTTVTGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTFEVYRGRESYTMYKASAKEYF
ENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYITLKALGRGAVSHELIRFIYEIRMVAVNGECPDFFTCHECGR
EDNLYVYSYSRNGLCCKNCATNVYDGITLSGSTVYTLQYIVTAQLNRLYSFTVTKEVQEELRLVVNRLESIVFDKEFKSK
EMLNLTI

Sequences:

>Translated_247_residues
MAEVTTVTGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTFEVYRGRESYTMYKASAKEYF
ENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYITLKALGRGAVSHELIRFIYEIRMVAVNGECPDFFTCHECGR
EDNLYVYSYSRNGLCCKNCATNVYDGITLSGSTVYTLQYIVTAQLNRLYSFTVTKEVQEELRLVVNRLESIVFDKEFKSK
EMLNLTI
>Mature_246_residues
AEVTTVTGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTFEVYRGRESYTMYKASAKEYFE
NVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYITLKALGRGAVSHELIRFIYEIRMVAVNGECPDFFTCHECGRE
DNLYVYSYSRNGLCCKNCATNVYDGITLSGSTVYTLQYIVTAQLNRLYSFTVTKEVQEELRLVVNRLESIVFDKEFKSKE
MLNLTI

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28190; Mature: 28059

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEVTTVTGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTF
CCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHH
EVYRGRESYTMYKASAKEYFENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYIT
HHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKALGRGAVSHELIRFIYEIRMVAVNGECPDFFTCHECGREDNLYVYSYSRNGLCCKNCA
HHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCCEEEEEECCCCEEHHHCC
TNVYDGITLSGSTVYTLQYIVTAQLNRLYSFTVTKEVQEELRLVVNRLESIVFDKEFKSK
CHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EMLNLTI
CEEEECC
>Mature Secondary Structure 
AEVTTVTGMILSAMPVGEYDRRLVILTKEYGKITVFAKGARKPNSTLIGVTRSFIFGTF
CCHHHHHHHHHHCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCEEEHHHHHHHHHHH
EVYRGRESYTMYKASAKEYFENVVNDLNAVCYACYFAEIADYYGRENLDASEMINLLYIT
HHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LKALGRGAVSHELIRFIYEIRMVAVNGECPDFFTCHECGREDNLYVYSYSRNGLCCKNCA
HHHHCCCHHHHHHHHHHHHHEEEEECCCCCCCHHHHHCCCCCCEEEEEECCCCEEHHHCC
TNVYDGITLSGSTVYTLQYIVTAQLNRLYSFTVTKEVQEELRLVVNRLESIVFDKEFKSK
CHHCCCEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EMLNLTI
CEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA