| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yitJ [H]
Identifier: 238917210
GI number: 238917210
Start: 1319938
End: 1321725
Strand: Reverse
Name: yitJ [H]
Synonym: EUBELI_01283
Alternate gene names: 238917210
Gene position: 1321725-1319938 (Counterclockwise)
Preceding gene: 238917211
Following gene: 238917209
Centisome position: 61.64
GC content: 37.64
Gene sequence:
>1788_bases ATGAAGTATACAGGAACAGCAGGAATATTATATGACAGATTAAAGAGTGAAATACTGGTGGCAGATGGTGCGTTTGGAAC ATACTATGCTAAGAAGTATGATACGGGCAGCCTGCCTGAGCTGGCAAATTTACAGGCTTCAGACAGAGTACTGGCAATTC ATAAAGAATATATTGAAGCTGGTGCTAAGATTATCAGAACTAATACATTTGCAAGTAATACCGTGTGTCTTGGAGCGGGA TTTGATGAGGTAAGAAATAATATTAAAAATGCCGTTGACATTGCAAGGGAAGCCGTAAAGGGGACAGATGTGCTTGTAGC AGCTGATATTGGCCCTATTCCTGGTGAAAATATGATTGAAAAAGAGCATATTGAAAAAGAGTATGTTGATATAGTTAATG TTTTTAAGGAATGTGGCGTTGATATATTTGTTTTTGAAACATTTCCAGAACTGGGATTTATTGATAAAGCAATTGAAAAT GCAGGAGAAAACGGATTTGTTATAACTCAGTTTGCAATAAATCAGTTTGGCTATAGCAGTGCAGGCTTTAGTGCAAGAAA GCTGATTGAAGAAGCTGGGAAAAATTCATATATTGATGCATGTGGATTTAACTGCGGAGTTGGTCCGGGACATATGAAGA AGCTTGTGCAGAGCCTTATTAACAGGAATGACAAGTATTTTGCGGTGCTTCCAAATGCAGGATATCCACAGGTTGTAAGC GGTCGAATGGTATTTGATGATAACAATGCAGCATATTTTTCACAGATTATGCATGATCTGGCTGAGGATGGAGCTGATAT TATTGGCGGCTGTTGTGGAACAACACCTGAATATATAAGACAGATGGTTTTAAAAACTGCTGATGTTGTTCATATGAAAA ATGCTTCCATAGAAGAAGAGATATCAGAAAAGAAAACTGCAAATGATGTTTCTTTCTATAAAGGAAAAGAAGGAAGAAAA CTGATTGCTGTAGAACTTGCTCCTCCGCTTGGAATTGATGATGAGAAGATTATGGATGCTGCTTTTTTGATGAAGGAAAG CGGAGTTGATGTGCTTACATTTCCGGATTCACCATCAGGAAGAACACGTGCAGATTCAATACTTATGGCAGAAAAGGTTT CGAGAGAAACGGGAATGTGTGTTATGCCGCACATATGCTGTCGTGACAAGAATGCTATAGCAATGCGTTCACAGCTTTTG GGAGCACATATAAATGATATTAATAATTTTCTCGTTATTACCGGTGATCCCATACCATCAGTTGTAAGAGCGTCTGTAAA GAGTGTGTTTAACTTCGATTCAGTTGGACTTATGAATATAATAAGTGATATGAATCAGGAACAGTTTGCCGGGAAACCGG TTATATATGGTGGAGCAATTAATCAGGGAAGGGTTAATTTTAAAGTGGAACTTGAGCGTGTTAAGAAAAAAATGGAGGCG GGAGCCACATTTTTTATGACGCAGCCTGTATTTTCTGATGAAGATATAGACAGACTCAGACAGATTAAAGAACAGACAGG GGCAAGGATTCTTTGTGGAATAATGCCATTTGTAAGTCTTCGAAATGCAACATTCATGAAAAATGAGATGACAGGTATTA ATGTTACTGATGAGATTCTTTCAAGATACAGAGCTGATATGTCAAAAGAAGAGGGAGAAGAGACCGGTATTCAGATAGCA AGGGAAATAATTGCAAAGACTACTGATTTTGTTGATGGGTATTATTTTTCATTTCCATTTAACAGGGTACATATGTTAAA GAAGATTATTGGGAAGAACAATCAGTAA
Upstream 100 bases:
>100_bases TTTTAGTGCAAATTAAACTTAATAATGATACAATTTTGGAGTCACTTATATAAGGTGGCTCCTTTTTTAAGTTGAATGTT AAAAGATAAGGGGACTGGGC
Downstream 100 bases:
>100_bases GTAGGACTATTCTATTGACTTATTAGAAATGTATCTGATATAATGTTGAAAAGTTTCGATGCGGAATAATTTAATAATAT GTGAGGTGTGAGGTGTGGTA
Product: bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein
Products: NA
Alternate protein names: Homocysteine S-methyltransferase; S-methylmethionine:homocysteine methyltransferase; 5,10-methylenetetrahydrofolate reductase [H]
Number of amino acids: Translated: 595; Mature: 595
Protein sequence:
>595_residues MKYTGTAGILYDRLKSEILVADGAFGTYYAKKYDTGSLPELANLQASDRVLAIHKEYIEAGAKIIRTNTFASNTVCLGAG FDEVRNNIKNAVDIAREAVKGTDVLVAADIGPIPGENMIEKEHIEKEYVDIVNVFKECGVDIFVFETFPELGFIDKAIEN AGENGFVITQFAINQFGYSSAGFSARKLIEEAGKNSYIDACGFNCGVGPGHMKKLVQSLINRNDKYFAVLPNAGYPQVVS GRMVFDDNNAAYFSQIMHDLAEDGADIIGGCCGTTPEYIRQMVLKTADVVHMKNASIEEEISEKKTANDVSFYKGKEGRK LIAVELAPPLGIDDEKIMDAAFLMKESGVDVLTFPDSPSGRTRADSILMAEKVSRETGMCVMPHICCRDKNAIAMRSQLL GAHINDINNFLVITGDPIPSVVRASVKSVFNFDSVGLMNIISDMNQEQFAGKPVIYGGAINQGRVNFKVELERVKKKMEA GATFFMTQPVFSDEDIDRLRQIKEQTGARILCGIMPFVSLRNATFMKNEMTGINVTDEILSRYRADMSKEEGEETGIQIA REIIAKTTDFVDGYYFSFPFNRVHMLKKIIGKNNQ
Sequences:
>Translated_595_residues MKYTGTAGILYDRLKSEILVADGAFGTYYAKKYDTGSLPELANLQASDRVLAIHKEYIEAGAKIIRTNTFASNTVCLGAG FDEVRNNIKNAVDIAREAVKGTDVLVAADIGPIPGENMIEKEHIEKEYVDIVNVFKECGVDIFVFETFPELGFIDKAIEN AGENGFVITQFAINQFGYSSAGFSARKLIEEAGKNSYIDACGFNCGVGPGHMKKLVQSLINRNDKYFAVLPNAGYPQVVS GRMVFDDNNAAYFSQIMHDLAEDGADIIGGCCGTTPEYIRQMVLKTADVVHMKNASIEEEISEKKTANDVSFYKGKEGRK LIAVELAPPLGIDDEKIMDAAFLMKESGVDVLTFPDSPSGRTRADSILMAEKVSRETGMCVMPHICCRDKNAIAMRSQLL GAHINDINNFLVITGDPIPSVVRASVKSVFNFDSVGLMNIISDMNQEQFAGKPVIYGGAINQGRVNFKVELERVKKKMEA GATFFMTQPVFSDEDIDRLRQIKEQTGARILCGIMPFVSLRNATFMKNEMTGINVTDEILSRYRADMSKEEGEETGIQIA REIIAKTTDFVDGYYFSFPFNRVHMLKKIIGKNNQ >Mature_595_residues MKYTGTAGILYDRLKSEILVADGAFGTYYAKKYDTGSLPELANLQASDRVLAIHKEYIEAGAKIIRTNTFASNTVCLGAG FDEVRNNIKNAVDIAREAVKGTDVLVAADIGPIPGENMIEKEHIEKEYVDIVNVFKECGVDIFVFETFPELGFIDKAIEN AGENGFVITQFAINQFGYSSAGFSARKLIEEAGKNSYIDACGFNCGVGPGHMKKLVQSLINRNDKYFAVLPNAGYPQVVS GRMVFDDNNAAYFSQIMHDLAEDGADIIGGCCGTTPEYIRQMVLKTADVVHMKNASIEEEISEKKTANDVSFYKGKEGRK LIAVELAPPLGIDDEKIMDAAFLMKESGVDVLTFPDSPSGRTRADSILMAEKVSRETGMCVMPHICCRDKNAIAMRSQLL GAHINDINNFLVITGDPIPSVVRASVKSVFNFDSVGLMNIISDMNQEQFAGKPVIYGGAINQGRVNFKVELERVKKKMEA GATFFMTQPVFSDEDIDRLRQIKEQTGARILCGIMPFVSLRNATFMKNEMTGINVTDEILSRYRADMSKEEGEETGIQIA REIIAKTTDFVDGYYFSFPFNRVHMLKKIIGKNNQ
Specific function: Terminal step in the de novo biosynthesis of methionine. [C]
COG id: COG0685
COG function: function code E; 5,10-methylenetetrahydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Hcy-binding domain [H]
Homologues:
Organism=Homo sapiens, GI169790923, Length=315, Percent_Identity=24.1269841269841, Blast_Score=85, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17535405, Length=317, Percent_Identity=25.2365930599369, Blast_Score=86, Evalue=4e-17,
Paralogues:
None
Copy number: 513 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1320 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003171 - InterPro: IPR003726 [H]
Pfam domain/function: PF02219 MTHFR; PF02574 S-methyl_trans [H]
EC number: =2.1.1.10; =1.5.1.20 [H]
Molecular weight: Translated: 65701; Mature: 65701
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: PS50970 HCY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYTGTAGILYDRLKSEILVADGAFGTYYAKKYDTGSLPELANLQASDRVLAIHKEYIEA CCCCCCHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCHHHCCCCCCCEEHHHHHHHHC GAKIIRTNTFASNTVCLGAGFDEVRNNIKNAVDIAREAVKGTDVLVAADIGPIPGENMIE CCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH KEHIEKEYVDIVNVFKECGVDIFVFETFPELGFIDKAIENAGENGFVITQFAINQFGYSS HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEHHHHCCCCC AGFSARKLIEEAGKNSYIDACGFNCGVGPGHMKKLVQSLINRNDKYFAVLPNAGYPQVVS CCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC GRMVFDDNNAAYFSQIMHDLAEDGADIIGGCCGTTPEYIRQMVLKTADVVHMKNASIEEE CEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHH ISEKKTANDVSFYKGKEGRKLIAVELAPPLGIDDEKIMDAAFLMKESGVDVLTFPDSPSG HHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC RTRADSILMAEKVSRETGMCVMPHICCRDKNAIAMRSQLLGAHINDINNFLVITGDPIPS CCHHHHHHHHHHHHHCCCCEEECHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH VVRASVKSVFNFDSVGLMNIISDMNQEQFAGKPVIYGGAINQGRVNFKVELERVKKKMEA HHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCEEECCCCCCCEEEEEEEHHHHHHHHHC GATFFMTQPVFSDEDIDRLRQIKEQTGARILCGIMPFVSLRNATFMKNEMTGINVTDEIL CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEECCCCCCCCCHHHHH SRYRADMSKEEGEETGIQIAREIIAKTTDFVDGYYFSFPFNRVHMLKKIIGKNNQ HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKYTGTAGILYDRLKSEILVADGAFGTYYAKKYDTGSLPELANLQASDRVLAIHKEYIEA CCCCCCHHHHHHHHHCCEEEECCCCCCCEECCCCCCCCCHHHCCCCCCCEEHHHHHHHHC GAKIIRTNTFASNTVCLGAGFDEVRNNIKNAVDIAREAVKGTDVLVAADIGPIPGENMIE CCEEEEECCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHH KEHIEKEYVDIVNVFKECGVDIFVFETFPELGFIDKAIENAGENGFVITQFAINQFGYSS HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEEEHHHHCCCCC AGFSARKLIEEAGKNSYIDACGFNCGVGPGHMKKLVQSLINRNDKYFAVLPNAGYPQVVS CCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCC GRMVFDDNNAAYFSQIMHDLAEDGADIIGGCCGTTPEYIRQMVLKTADVVHMKNASIEEE CEEEEECCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCHHHH ISEKKTANDVSFYKGKEGRKLIAVELAPPLGIDDEKIMDAAFLMKESGVDVLTFPDSPSG HHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCC RTRADSILMAEKVSRETGMCVMPHICCRDKNAIAMRSQLLGAHINDINNFLVITGDPIPS CCHHHHHHHHHHHHHCCCCEEECHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHH VVRASVKSVFNFDSVGLMNIISDMNQEQFAGKPVIYGGAINQGRVNFKVELERVKKKMEA HHHHHHHHHHCCCCCHHHHHHHHCCHHHHCCCCEEECCCCCCCEEEEEEEHHHHHHHHHC GATFFMTQPVFSDEDIDRLRQIKEQTGARILCGIMPFVSLRNATFMKNEMTGINVTDEIL CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCEECCCCCCCCCHHHHH SRYRADMSKEEGEETGIQIAREIIAKTTDFVDGYYFSFPFNRVHMLKKIIGKNNQ HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]