| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is hisA [H]
Identifier: 238916951
GI number: 238916951
Start: 1033381
End: 1034469
Strand: Reverse
Name: hisA [H]
Synonym: EUBELI_01020
Alternate gene names: 238916951
Gene position: 1034469-1033381 (Counterclockwise)
Preceding gene: 238916952
Following gene: 238916950
Centisome position: 48.25
GC content: 40.77
Gene sequence:
>1089_bases ATGCGATTATATCCAGCAATTGATGTTAAAGACGGGCAGTGTGTCCGCTTAAAGAAGGGACTTTTTAATGAAGTTACTGT ATATTCTGAAAGACCTTACGAGATCGCTAAAGGCTTTGAAGAGGCAGGAGCACAGTTTATACATACTGTTGACCTTGATG GCGCTTTGAAAGGACACGGCGTTAATGCAGAAACTATTAAGAAGATATGTTCAAGTGTTAATGTTCCTGTACAGATGGGC GGTGGAATCCGTACTCTTGAGAACATTCAGGAGGTTCTTGACCTCGGCGTATACAGAGTTATTATCGGTACTAAGGCTGT TGAGAATCCTGATTTTATTAAGGCTGCCATTGACAGATTCGGTGCTGAACATATTGTTGTAGGTGTTGATGCAAAAGATG GTCTTGTGGCTATCGAGGGCTGGGAAAAGGTCAGTGATAAGACCGCACTTTCACTTGCACTTGCAATGAAGGATATCGGC GTACAGACTATTGTGTACACTGATATATCAAAGGATGGTATGCTTGCCGGTCCTAATGTTGAACAGACTAAGATTCTTTC TGATAAAACAGGTATTGATATTATTGCTTCAGGCGGCATGAGCTGCATGGATGATCTTACACATATTAATGATGCCGGTA TCCATGGTGCAATTATCGGTAAGGCAATATATGAAAAACGTATTGACCTTAAGGAGGCTGTTAATCTTTTTGAATCCGGA GCATCTTACAGCAAGGCATCATCAATGCCTAAGGCTGATATTTCGTTTAAGGATTTAAAGCTTGATGCCAATGGTCTTAT TCCAGTTGTTGTACAGGATTATGTCAATGATGAAGTCCTTATGCTTGCTTACATGAATGAGGAAGCCTACAATAAAACTT TAGAGACTGGCATCATGACTTATTATAGCCGAAGCCGTCAGGAGCTCTGGGTTAAAGGTCTTACATCAGGTCATTTCCAG TATGTTGGTTCTCTTGACATCGACTGTGACAATGATACTATTCTTGCAAAGGTTCGTCAGGTTGGTGCTGCATGCCACAC TGGAAACAGAACATGCTTCTATAGAAATATTAAAACATGGAACAGATAA
Upstream 100 bases:
>100_bases TTTGCAAAGGCATTGGATGAGGCAACTGTTAAAGATACAAGAATCAAGACAATTCTCTCTACTAAGGGAAGTCTCTAAAT ATACTTAAGGAGTTACATAT
Downstream 100 bases:
>100_bases TTTATGGAATATAAATATATAATCACAGATATTAACAATAAAATCTTCTGTTGCATATATACTTCTGATAATACCTGCCA CTATCTTAAGCCTTTAGATA
Product: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase
Products: NA
Alternate protein names: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [H]
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVNVPVQMG GGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVVGVDAKDGLVAIEGWEKVSDKTALSLALAMKDIG VQTIVYTDISKDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG ASYSKASSMPKADISFKDLKLDANGLIPVVVQDYVNDEVLMLAYMNEEAYNKTLETGIMTYYSRSRQELWVKGLTSGHFQ YVGSLDIDCDNDTILAKVRQVGAACHTGNRTCFYRNIKTWNR
Sequences:
>Translated_362_residues MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVNVPVQMG GGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVVGVDAKDGLVAIEGWEKVSDKTALSLALAMKDIG VQTIVYTDISKDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG ASYSKASSMPKADISFKDLKLDANGLIPVVVQDYVNDEVLMLAYMNEEAYNKTLETGIMTYYSRSRQELWVKGLTSGHFQ YVGSLDIDCDNDTILAKVRQVGAACHTGNRTCFYRNIKTWNR >Mature_362_residues MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHGVNAETIKKICSSVNVPVQMG GGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRFGAEHIVVGVDAKDGLVAIEGWEKVSDKTALSLALAMKDIG VQTIVYTDISKDGMLAGPNVEQTKILSDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG ASYSKASSMPKADISFKDLKLDANGLIPVVVQDYVNDEVLMLAYMNEEAYNKTLETGIMTYYSRSRQELWVKGLTSGHFQ YVGSLDIDCDNDTILAKVRQVGAACHTGNRTCFYRNIKTWNR
Specific function: Histidine biosynthesis; fourth step. [C]
COG id: COG0106
COG function: function code E; Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hisA/hisF family [H]
Homologues:
Organism=Escherichia coli, GI87082028, Length=243, Percent_Identity=32.9218106995885, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI2367128, Length=98, Percent_Identity=51.0204081632653, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI1788336, Length=242, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=9e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006062 - InterPro: IPR006063 - InterPro: IPR023016 - InterPro: IPR011060 [H]
Pfam domain/function: PF00977 His_biosynth [H]
EC number: =5.3.1.16 [H]
Molecular weight: Translated: 39629; Mature: 39629
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHG CCCCCCEECCCCCEEEEHHCCCCCEEEECCCCHHHHCCHHHCCCEEEEEEECCCCCCCCC VNAETIKKICSSVNVPVQMGGGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRF CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHC GAEHIVVGVDAKDGLVAIEGWEKVSDKTALSLALAMKDIGVQTIVYTDISKDGMLAGPNV CCCEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEECCCC EQTKILSDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG CHHEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC ASYSKASSMPKADISFKDLKLDANGLIPVVVQDYVNDEVLMLAYMNEEAYNKTLETGIMT CCHHHHCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEEEEEECCHHHHHHHHHHHHH YYSRSRQELWVKGLTSGHFQYVGSLDIDCDNDTILAKVRQVGAACHTGNRTCFYRNIKTW HHHHCHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC NR CC >Mature Secondary Structure MRLYPAIDVKDGQCVRLKKGLFNEVTVYSERPYEIAKGFEEAGAQFIHTVDLDGALKGHG CCCCCCEECCCCCEEEEHHCCCCCEEEECCCCHHHHCCHHHCCCEEEEEEECCCCCCCCC VNAETIKKICSSVNVPVQMGGGIRTLENIQEVLDLGVYRVIIGTKAVENPDFIKAAIDRF CCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHC GAEHIVVGVDAKDGLVAIEGWEKVSDKTALSLALAMKDIGVQTIVYTDISKDGMLAGPNV CCCEEEEEECCCCCEEEEECCHHHCCHHHHHHHHHHHHCCEEEEEEEECCCCCEEECCCC EQTKILSDKTGIDIIASGGMSCMDDLTHINDAGIHGAIIGKAIYEKRIDLKEAVNLFESG CHHEEECCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCC ASYSKASSMPKADISFKDLKLDANGLIPVVVQDYVNDEVLMLAYMNEEAYNKTLETGIMT CCHHHHCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEEEEEECCHHHHHHHHHHHHH YYSRSRQELWVKGLTSGHFQYVGSLDIDCDNDTILAKVRQVGAACHTGNRTCFYRNIKTW HHHHCHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC NR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA