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The map label for this gene is ynbB [H]

Identifier: 238916924

GI number: 238916924

Start: 1011964

End: 1013238

Strand: Direct

Name: ynbB [H]

Synonym: EUBELI_00993

Alternate gene names: 238916924

Gene position: 1011964-1013238 (Clockwise)

Preceding gene: 238916923

Following gene: 238916925

Centisome position: 47.2

GC content: 41.25

Gene sequence:

>1275_bases
ATGAGAGAAATGTATAAGAATATGGGAATCTGTGATGAAGTATATGATTATTGCGACAATATAATTAAGTCGCTTCATGA
CAGATTTGAAGAGATAGATAAGAATGCAGAATATAACCAGATGAAGGTTATAAAGGCGATGCAGGATAATAAGGTTGCCG
AGATGCATTTATCAGGAACAACAGGTTACGGTTATAATGATGACGGAAGAGATACTCTTGAGAAAATATATTCAGATATA
TTCAAGACAGAGGATGCACTTGTAAGGCCACAGATTATCTGCGGAACTCATGCGTTAAATGTAGCTTTATCATCTAACTT
AAGACCAGGTGATGAGCTTTTATCACCGGTTGGGAAGCCATATGATACAATGGATGAGATTATCGGTATCAGACCTTCTA
AGGGAAGCCTTGCAGAATATGGAATTACATATGCACAGGTTGACCTGCTGCCGGACGGTGGTTTTGATTATGAGGGTATT
AAGAATGCAATCAATGAAAGAACAAAGCTTGTTACAATTCAGCGTTCCAAGGGATATGCTTCAAGACCTACACTTTCAGT
TGAAAGAATCGGTGAGCTTATAAGTTTTATCAAGGATATCAAGCCTGATGTTATATGCATGGTTGATAACTGTTATGGTG
AATTTGTTGAAAGAATCGAGCCTTCAGAGGTTGGGGCTGACATGATAGTCGGTTCTCTTATAAAGAATCCGGGCGGAGGA
CTTGCACCATGCGGCGGCTATATCGCAGGAAAAAAGGAATGTGTTGAGCAGGCAGCTTATAGATTGTCTTCACCGGGGCT
TGGAAAAGAAGTCGGTGCAACACTCGGTGTAAACCAGAGCTTTTATCAGGGACTTTTCTTATCACCTGTAGTTGTTGCAG
GTGCGCTTAAAGGTGCTATATTTGCTGCAAATGTATACGAAAAGGCAGGTTTTGTAGTAAGACCTGATGGAAGTGAGCCA
AGATATGATATTATTCAGGCAGTTGAACTTGGAAGTGCAGACGGGCTTCTTGCTTTCTGTAAAGGAATTCAGGCTGCAGC
ACCTGTTGACAGCTTCGTTACACCAGAACCATGGCCGATGCCAGGATATGATTCAGACGTTATCATGGCTGCCGGAGCCT
TCGTTCAAGGCTCATCAATAGAGCTTTCTGCTGATGGTCCGTTAAAAGAACCTTATTCGGTATTCTTCCAGGGGGGACTT
ACCTGGTATCATGCAAAGCTTGGAATTATGATGAGTGTTCAGAAAATGTTTGAAAAAGACCTTATAAAGCTTTGA

Upstream 100 bases:

>100_bases
GAGAGCCGTTGGTTACATGGGTGGATTTTTCCCAGATACGAAGAGAAGATGCGCTTTCGTATATGCTTGAACAACTAAAA
GAAAAGGAAATTATTTAATT

Downstream 100 bases:

>100_bases
TTGAATTAATATTTGTGTTATAATGCATTGGAGTATGGATTTTTCCGTACTCCAATTTATGATTAAAGGGTGAAATCTAT
GAGTAATATTTCTAAATATA

Product: cystathionine gamma-lyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MREMYKNMGICDEVYDYCDNIIKSLHDRFEEIDKNAEYNQMKVIKAMQDNKVAEMHLSGTTGYGYNDDGRDTLEKIYSDI
FKTEDALVRPQIICGTHALNVALSSNLRPGDELLSPVGKPYDTMDEIIGIRPSKGSLAEYGITYAQVDLLPDGGFDYEGI
KNAINERTKLVTIQRSKGYASRPTLSVERIGELISFIKDIKPDVICMVDNCYGEFVERIEPSEVGADMIVGSLIKNPGGG
LAPCGGYIAGKKECVEQAAYRLSSPGLGKEVGATLGVNQSFYQGLFLSPVVVAGALKGAIFAANVYEKAGFVVRPDGSEP
RYDIIQAVELGSADGLLAFCKGIQAAAPVDSFVTPEPWPMPGYDSDVIMAAGAFVQGSSIELSADGPLKEPYSVFFQGGL
TWYHAKLGIMMSVQKMFEKDLIKL

Sequences:

>Translated_424_residues
MREMYKNMGICDEVYDYCDNIIKSLHDRFEEIDKNAEYNQMKVIKAMQDNKVAEMHLSGTTGYGYNDDGRDTLEKIYSDI
FKTEDALVRPQIICGTHALNVALSSNLRPGDELLSPVGKPYDTMDEIIGIRPSKGSLAEYGITYAQVDLLPDGGFDYEGI
KNAINERTKLVTIQRSKGYASRPTLSVERIGELISFIKDIKPDVICMVDNCYGEFVERIEPSEVGADMIVGSLIKNPGGG
LAPCGGYIAGKKECVEQAAYRLSSPGLGKEVGATLGVNQSFYQGLFLSPVVVAGALKGAIFAANVYEKAGFVVRPDGSEP
RYDIIQAVELGSADGLLAFCKGIQAAAPVDSFVTPEPWPMPGYDSDVIMAAGAFVQGSSIELSADGPLKEPYSVFFQGGL
TWYHAKLGIMMSVQKMFEKDLIKL
>Mature_424_residues
MREMYKNMGICDEVYDYCDNIIKSLHDRFEEIDKNAEYNQMKVIKAMQDNKVAEMHLSGTTGYGYNDDGRDTLEKIYSDI
FKTEDALVRPQIICGTHALNVALSSNLRPGDELLSPVGKPYDTMDEIIGIRPSKGSLAEYGITYAQVDLLPDGGFDYEGI
KNAINERTKLVTIQRSKGYASRPTLSVERIGELISFIKDIKPDVICMVDNCYGEFVERIEPSEVGADMIVGSLIKNPGGG
LAPCGGYIAGKKECVEQAAYRLSSPGLGKEVGATLGVNQSFYQGLFLSPVVVAGALKGAIFAANVYEKAGFVVRPDGSEP
RYDIIQAVELGSADGLLAFCKGIQAAAPVDSFVTPEPWPMPGYDSDVIMAAGAFVQGSSIELSADGPLKEPYSVFFQGGL
TWYHAKLGIMMSVQKMFEKDLIKL

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 46215; Mature: 46215

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREMYKNMGICDEVYDYCDNIIKSLHDRFEEIDKNAEYNQMKVIKAMQDNKVAEMHLSGT
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCC
TGYGYNDDGRDTLEKIYSDIFKTEDALVRPQIICGTHALNVALSSNLRPGDELLSPVGKP
CCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECHHHHHHHHCCCCCCCHHHHHHCCCC
YDTMDEIIGIRPSKGSLAEYGITYAQVDLLPDGGFDYEGIKNAINERTKLVTIQRSKGYA
HHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
SRPTLSVERIGELISFIKDIKPDVICMVDNCYGEFVERIEPSEVGADMIVGSLIKNPGGG
CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
LAPCGGYIAGKKECVEQAAYRLSSPGLGKEVGATLGVNQSFYQGLFLSPVVVAGALKGAI
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FAANVYEKAGFVVRPDGSEPRYDIIQAVELGSADGLLAFCKGIQAAAPVDSFVTPEPWPM
HHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
PGYDSDVIMAAGAFVQGSSIELSADGPLKEPYSVFFQGGLTWYHAKLGIMMSVQKMFEKD
CCCCCCHHEECCCEEECCCEEECCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
LIKL
HHCC
>Mature Secondary Structure
MREMYKNMGICDEVYDYCDNIIKSLHDRFEEIDKNAEYNQMKVIKAMQDNKVAEMHLSGT
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCC
TGYGYNDDGRDTLEKIYSDIFKTEDALVRPQIICGTHALNVALSSNLRPGDELLSPVGKP
CCCCCCCCCHHHHHHHHHHHHHCCCHHCCCEEEECHHHHHHHHCCCCCCCHHHHHHCCCC
YDTMDEIIGIRPSKGSLAEYGITYAQVDLLPDGGFDYEGIKNAINERTKLVTIQRSKGYA
HHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCHHHHHHHHCCCEEEEEEECCCCCC
SRPTLSVERIGELISFIKDIKPDVICMVDNCYGEFVERIEPSEVGADMIVGSLIKNPGGG
CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
LAPCGGYIAGKKECVEQAAYRLSSPGLGKEVGATLGVNQSFYQGLFLSPVVVAGALKGAI
CCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
FAANVYEKAGFVVRPDGSEPRYDIIQAVELGSADGLLAFCKGIQAAAPVDSFVTPEPWPM
HHHHHHHHCCEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
PGYDSDVIMAAGAFVQGSSIELSADGPLKEPYSVFFQGGLTWYHAKLGIMMSVQKMFEKD
CCCCCCHHEECCCEEECCCEEECCCCCCCCCHHHHHHCCCEEEHHHHHHHHHHHHHHHHH
LIKL
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]