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The map label for this gene is rimP

Identifier: 238916822

GI number: 238916822

Start: 901540

End: 902010

Strand: Direct

Name: rimP

Synonym: EUBELI_00890

Alternate gene names: 238916822

Gene position: 901540-902010 (Clockwise)

Preceding gene: 238916821

Following gene: 238916823

Centisome position: 42.05

GC content: 38.0

Gene sequence:

>471_bases
ATGGGAAAAAGAGAAAGCTATGAAGCTAAGACAACAGAACTTATACAGCCGGTTGTTGAAGCTAACGGCGTGGAACTTTT
TGATGTTGACTACGTGAAAGAAGGCAGCGACTGGTATCTGCGTGTCTACATTGACAAAGAAGGCGGAGTTACTATTGATG
ACTGCCAGAATGTGAGCAGAGCTTTCAATGAGATACTGGACAGGGAGAATTACATTGATGACCAGTATATATTTGAGGTA
AGTTCTCCGGGTCTTACAAGACCTCTTAAGAAAGAGAAGGATTATGAAAAGAGTATTGGCAGAATGATTGAGATTAAATT
ATTCAGTCCTGTTGATAAATCTAAGGAATATTCCGGGGTTCTTAAGGAATATGATAAAGATACGGTAACAATCAGTATTG
ATGATGTAACTAAAACATTTGACAGAAGTAATCTGGCTATGATCAGATGGGCATTTGTAGATGAAGTATAA

Upstream 100 bases:

>100_bases
TACAAGCTACTATATGTGATACGGAAAGAGTGGGCAGAGATGTCCACTCTTTCGTTCATATATAAGAAAACTGAATACTT
TTAGAAAGGGTGAGTACTGC

Downstream 100 bases:

>100_bases
TATATTTTTGGAGGAAATTAAAAGCAATGAATAAGGAATTAATTATGGCACTTGATGCTCTTGAGAAGGAGAATGGAATC
GATAAAGAGATTATGTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGKRESYEAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKEGGVTIDDCQNVSRAFNEILDRENYIDDQYIFEV
SSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGVLKEYDKDTVTISIDDVTKTFDRSNLAMIRWAFVDEV

Sequences:

>Translated_156_residues
MGKRESYEAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKEGGVTIDDCQNVSRAFNEILDRENYIDDQYIFEV
SSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGVLKEYDKDTVTISIDDVTKTFDRSNLAMIRWAFVDEV
>Mature_155_residues
GKRESYEAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKEGGVTIDDCQNVSRAFNEILDRENYIDDQYIFEVS
SPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGVLKEYDKDTVTISIDDVTKTFDRSNLAMIRWAFVDEV

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=140, Percent_Identity=36.4285714285714, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_EUBE2 (C4Z5N3)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002930339.1
- GeneID:   7956889
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_00890
- OMA:   PYEKIAN
- ProtClustDB:   PRK00092
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 18090; Mature: 17959

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRESYEAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKEGGVTIDDCQNVSR
CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEECCCCEEHHHHHHHHH
AFNEILDRENYIDDQYIFEVSSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGV
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
LKEYDKDTVTISIDDVTKTFDRSNLAMIRWAFVDEV
HHHCCCCEEEEEECCHHHHHCCCCEEEEEEEEECCC
>Mature Secondary Structure 
GKRESYEAKTTELIQPVVEANGVELFDVDYVKEGSDWYLRVYIDKEGGVTIDDCQNVSR
CCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCEEEEEEEECCCCEEHHHHHHHHH
AFNEILDRENYIDDQYIFEVSSPGLTRPLKKEKDYEKSIGRMIEIKLFSPVDKSKEYSGV
HHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
LKEYDKDTVTISIDDVTKTFDRSNLAMIRWAFVDEV
HHHCCCCEEEEEECCHHHHHCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA