| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is ilvD [H]
Identifier: 238916700
GI number: 238916700
Start: 771836
End: 773509
Strand: Direct
Name: ilvD [H]
Synonym: EUBELI_00762
Alternate gene names: 238916700
Gene position: 771836-773509 (Clockwise)
Preceding gene: 238916699
Following gene: 238916701
Centisome position: 36.0
GC content: 42.41
Gene sequence:
>1674_bases ATGATAAGTGATAACGCCAGAAGTGGTATGCAGCAGGCACCTGCACGAAGCCTTTTTAATGCACTTGGCTTCACAGCAGA AGAGATGAAGAAACCTATGATTGGTATTGTAAGCTCTTATAATGAGATTGTACCAGGTCATATGAATATTGATAAGATTG TCAATGCAGTTAAATTAGGAGTTGCTGAGGCAGGCGGTGTGCCTGTAGTATTCCCTGCTATTGCAGTATGCGATGGTATT GCAATGGGACATGTCGGAATGAAATATTCTTTAGTAACAAGAGATTTAATTGCAGATTCAACAGAGTGTATGGCAATTGC ACATCAGTTTGACGGACTTGTAATGGTTCCTAACTGTGATAAGAATGTTCCAGGACTTTTAATGGCAGCAGCAAGACTTA ATCTTCCAACTGTATTCGTATCAGGCGGACCAATGCTTGCAGGTCATGTTAAGGGTAAGAAGAGAAGCCTTTCTTCAATG TTTGAGGCTGTTGGTTCATATGCAGCAGGAACAATGACAGAGGAAGATGTACTTGAGTTTGAGGAAAAGGTATGCCCAAC ATGTGGTTCATGTTCAGGCATGTACACAGCCAATTCAATGAACTGCCTTACAGAGGCACTTGGTATGGGACTTCGCGGCA ATGGTACAATTCCAGCCGTATATTCAGAGAGAATCAAGCTTGCAAAGCACGCAGGCATGGCTGTTATGGATATGGTTAAT AAGGGAATCACAGCAAGAGATATCATCACTAAGGATTCTATTATGAATGCCCTTACAGTAGATATGGCACTTGGATGTTC TACTAATTCAATGCTTCACCTTCCAGCTATTGCACATGAGATAGGATTTGATTTTGATATCAAATTCGCTAACCCAATAA GTGAAAAGACTCCTAATCTCTGCCACCTTGCACCAGCAGGTCCAACATACATGGAAGACCTTAATGAAGCAGGCGGTGTA TATGCAGTTATGAAAGAGCTTGCAGATATCGGACTTCTTAATACAGACTGCCTGACAGTTTCAGGAAAGACAATCGGCGA GTGCATAGCAACAGCATACAACCGTGATCCTGAAGTCATAAGAACAGTTGATAATGCATACAGTAAGACAGGTGGTCTTG CAGTTCTTTCAGGAAATCTTGCACCAGACGGATCAGTAGTCAAGCGTTCAGCAGTTGTTCCAGAGATGCTTGTACATGAA GGCCCGGCAAGAGTATTTGATTCAGAAGAAGATGCAATTGCTGCTATTAAGGGTGGTAAGATAGTTGAAGGTGATGTAGT TGTTATCCGTTACGAAGGTCCTAAGGGTGGTCCTGGTATGAGAGAAATGCTTAATCCTACATCAGCTATTGCAGGTATGG GACTTGGCTCATCAGTTGCTCTTATTACAGATGGACGATTCTCAGGTGCAAGCCGTGGAGCTTCTATTGGTCATGTATCA CCAGAGGCTGCTGTTGGCGGACCTATTGCTTTAGTTGAAGAAGGAGATATCATCAGCATTGATATTCCGGGACTTAAACT TGAACTTAAGGTTTCAGATGAAGAGCTTGCTGCAAGAAAGGCTAAGTGGCAGCCAAGAGAACCTAAGGTAACAACAGGAT ACTTAAAGAGATATGCTTCACTCGTTACATCAGGAAACAGAGGAGCTATTCTTAAAAGTTCAGCAGATGAGTAA
Upstream 100 bases:
>100_bases ATGTCAGAAGGATGCACACTTGTAGGAACTGATAAGATGGGCGACTTAATCGCAGAGAGAGTTTAATACATTTAAATAAT ACATATTAAGGAGATAAGCT
Downstream 100 bases:
>100_bases TATTTAATATAATTATAAAAAGACATTAAAGAGAAATCAGGAGAAGATAAATGAAGTTAAATGGTTCAGAGATAATTGTT GAATGCTTGAAAGAACAGGG
Product: dihydroxy-acid dehydratase
Products: NA
Alternate protein names: DAD [H]
Number of amino acids: Translated: 557; Mature: 557
Protein sequence:
>557_residues MISDNARSGMQQAPARSLFNALGFTAEEMKKPMIGIVSSYNEIVPGHMNIDKIVNAVKLGVAEAGGVPVVFPAIAVCDGI AMGHVGMKYSLVTRDLIADSTECMAIAHQFDGLVMVPNCDKNVPGLLMAAARLNLPTVFVSGGPMLAGHVKGKKRSLSSM FEAVGSYAAGTMTEEDVLEFEEKVCPTCGSCSGMYTANSMNCLTEALGMGLRGNGTIPAVYSERIKLAKHAGMAVMDMVN KGITARDIITKDSIMNALTVDMALGCSTNSMLHLPAIAHEIGFDFDIKFANPISEKTPNLCHLAPAGPTYMEDLNEAGGV YAVMKELADIGLLNTDCLTVSGKTIGECIATAYNRDPEVIRTVDNAYSKTGGLAVLSGNLAPDGSVVKRSAVVPEMLVHE GPARVFDSEEDAIAAIKGGKIVEGDVVVIRYEGPKGGPGMREMLNPTSAIAGMGLGSSVALITDGRFSGASRGASIGHVS PEAAVGGPIALVEEGDIISIDIPGLKLELKVSDEELAARKAKWQPREPKVTTGYLKRYASLVTSGNRGAILKSSADE
Sequences:
>Translated_557_residues MISDNARSGMQQAPARSLFNALGFTAEEMKKPMIGIVSSYNEIVPGHMNIDKIVNAVKLGVAEAGGVPVVFPAIAVCDGI AMGHVGMKYSLVTRDLIADSTECMAIAHQFDGLVMVPNCDKNVPGLLMAAARLNLPTVFVSGGPMLAGHVKGKKRSLSSM FEAVGSYAAGTMTEEDVLEFEEKVCPTCGSCSGMYTANSMNCLTEALGMGLRGNGTIPAVYSERIKLAKHAGMAVMDMVN KGITARDIITKDSIMNALTVDMALGCSTNSMLHLPAIAHEIGFDFDIKFANPISEKTPNLCHLAPAGPTYMEDLNEAGGV YAVMKELADIGLLNTDCLTVSGKTIGECIATAYNRDPEVIRTVDNAYSKTGGLAVLSGNLAPDGSVVKRSAVVPEMLVHE GPARVFDSEEDAIAAIKGGKIVEGDVVVIRYEGPKGGPGMREMLNPTSAIAGMGLGSSVALITDGRFSGASRGASIGHVS PEAAVGGPIALVEEGDIISIDIPGLKLELKVSDEELAARKAKWQPREPKVTTGYLKRYASLVTSGNRGAILKSSADE >Mature_557_residues MISDNARSGMQQAPARSLFNALGFTAEEMKKPMIGIVSSYNEIVPGHMNIDKIVNAVKLGVAEAGGVPVVFPAIAVCDGI AMGHVGMKYSLVTRDLIADSTECMAIAHQFDGLVMVPNCDKNVPGLLMAAARLNLPTVFVSGGPMLAGHVKGKKRSLSSM FEAVGSYAAGTMTEEDVLEFEEKVCPTCGSCSGMYTANSMNCLTEALGMGLRGNGTIPAVYSERIKLAKHAGMAVMDMVN KGITARDIITKDSIMNALTVDMALGCSTNSMLHLPAIAHEIGFDFDIKFANPISEKTPNLCHLAPAGPTYMEDLNEAGGV YAVMKELADIGLLNTDCLTVSGKTIGECIATAYNRDPEVIRTVDNAYSKTGGLAVLSGNLAPDGSVVKRSAVVPEMLVHE GPARVFDSEEDAIAAIKGGKIVEGDVVVIRYEGPKGGPGMREMLNPTSAIAGMGLGSSVALITDGRFSGASRGASIGHVS PEAAVGGPIALVEEGDIISIDIPGLKLELKVSDEELAARKAKWQPREPKVTTGYLKRYASLVTSGNRGAILKSSADE
Specific function: Valine and isoleucine biosynthesis; fourth step. [C]
COG id: COG0129
COG function: function code EG; Dihydroxyacid dehydratase/phosphogluconate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ilvD/edd family [H]
Homologues:
Organism=Escherichia coli, GI48994964, Length=601, Percent_Identity=44.5923460898502, Blast_Score=483, Evalue=1e-137, Organism=Escherichia coli, GI1786464, Length=503, Percent_Identity=35.1888667992048, Blast_Score=243, Evalue=3e-65, Organism=Escherichia coli, GI2367371, Length=522, Percent_Identity=33.9080459770115, Blast_Score=231, Evalue=7e-62, Organism=Escherichia coli, GI1788157, Length=522, Percent_Identity=32.9501915708812, Blast_Score=226, Evalue=3e-60, Organism=Saccharomyces cerevisiae, GI6322476, Length=550, Percent_Identity=40.5454545454545, Blast_Score=395, Evalue=1e-110,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015928 - InterPro: IPR004404 - InterPro: IPR000581 - InterPro: IPR020558 [H]
Pfam domain/function: PF00920 ILVD_EDD [H]
EC number: =4.2.1.9 [H]
Molecular weight: Translated: 58343; Mature: 58343
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00886 ILVD_EDD_1 ; PS00887 ILVD_EDD_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISDNARSGMQQAPARSLFNALGFTAEEMKKPMIGIVSSYNEIVPGHMNIDKIVNAVKLG CCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAEAGGVPVVFPAIAVCDGIAMGHVGMKYSLVTRDLIADSTECMAIAHQFDGLVMVPNCD HHCCCCCCCHHHHHHHHCCHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCEEECCCCC KNVPGLLMAAARLNLPTVFVSGGPMLAGHVKGKKRSLSSMFEAVGSYAAGTMTEEDVLEF CCCCHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH EEKVCPTCGSCSGMYTANSMNCLTEALGMGLRGNGTIPAVYSERIKLAKHAGMAVMDMVN HHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KGITARDIITKDSIMNALTVDMALGCSTNSMLHLPAIAHEIGFDFDIKFANPISEKTPNL CCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEECHHHHHHHCCCEEEEECCCHHHCCCCE CHLAPAGPTYMEDLNEAGGVYAVMKELADIGLLNTDCLTVSGKTIGECIATAYNRDPEVI EEECCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHHH RTVDNAYSKTGGLAVLSGNLAPDGSVVKRSAVVPEMLVHEGPARVFDSEEDAIAAIKGGK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCE IVEGDVVVIRYEGPKGGPGMREMLNPTSAIAGMGLGSSVALITDGRFSGASRGASIGHVS EEECCEEEEEECCCCCCCCHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC PEAAVGGPIALVEEGDIISIDIPGLKLELKVSDEELAARKAKWQPREPKVTTGYLKRYAS CCCCCCCCEEEEECCCEEEEECCCEEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHH LVTSGNRGAILKSSADE HHCCCCCCEEECCCCCC >Mature Secondary Structure MISDNARSGMQQAPARSLFNALGFTAEEMKKPMIGIVSSYNEIVPGHMNIDKIVNAVKLG CCCCCHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHH VAEAGGVPVVFPAIAVCDGIAMGHVGMKYSLVTRDLIADSTECMAIAHQFDGLVMVPNCD HHCCCCCCCHHHHHHHHCCHHCCCCCCEEHHHHHHHHHCCHHHHHHHHHCCCEEECCCCC KNVPGLLMAAARLNLPTVFVSGGPMLAGHVKGKKRSLSSMFEAVGSYAAGTMTEEDVLEF CCCCHHHHHHHHCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHH EEKVCPTCGSCSGMYTANSMNCLTEALGMGLRGNGTIPAVYSERIKLAKHAGMAVMDMVN HHHHCCCCCCCCCCEECCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH KGITARDIITKDSIMNALTVDMALGCSTNSMLHLPAIAHEIGFDFDIKFANPISEKTPNL CCCCHHHHHHHHHHHHHHHHHHEECCCCCCEEECHHHHHHHCCCEEEEECCCHHHCCCCE CHLAPAGPTYMEDLNEAGGVYAVMKELADIGLLNTDCLTVSGKTIGECIATAYNRDPEVI EEECCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHHH RTVDNAYSKTGGLAVLSGNLAPDGSVVKRSAVVPEMLVHEGPARVFDSEEDAIAAIKGGK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEECCCE IVEGDVVVIRYEGPKGGPGMREMLNPTSAIAGMGLGSSVALITDGRFSGASRGASIGHVS EEECCEEEEEECCCCCCCCHHHHCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC PEAAVGGPIALVEEGDIISIDIPGLKLELKVSDEELAARKAKWQPREPKVTTGYLKRYAS CCCCCCCCEEEEECCCEEEEECCCEEEEEEECHHHHHHHHCCCCCCCCCCHHHHHHHHHH LVTSGNRGAILKSSADE HHCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA