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The map label for this gene is spoVAF [H]

Identifier: 238916691

GI number: 238916691

Start: 761801

End: 763261

Strand: Direct

Name: spoVAF [H]

Synonym: EUBELI_00753

Alternate gene names: 238916691

Gene position: 761801-763261 (Clockwise)

Preceding gene: 238916690

Following gene: 238916692

Centisome position: 35.53

GC content: 38.81

Gene sequence:

>1461_bases
TTGATTCAGAGTGCGGTTGAAAATGTGCAGGTGAAAGGAGTAAGTATGACTGATTTTACAACTAACATAGACATGAATGT
CCGCATGATGAATGAAAAGTTAAGAGTGGACAGGAATTTTGACATTCTGCAAAGAGATGTATTAATAGGTGGGAAGAGAA
CACATTTTTATTTTATAGATGGATTCGTACAGGAAGAAACAATTGAAAAACTGGTGCAGTTTTTTTATTCATTGAAAGAA
TCGGACATAAAGGATATAGATACATTCTTAGAAGTCGGAATGCCATATACAGAGATTGAAAAAAACGGACATTACGACGA
GGTGGAGAAGGCATTTCTTTCAGGACAGACAGTCATGATAATAGATGGCTTTGATGAATGTATACTTATTGACTGCCGTA
CTTATCCGATGCGTTCAGTTACAGAGCCTTACAAAGACAAGGTTCTGCGTGGCTCAAGAGACGGATTTGTTGAGACACTT
GTGTGCAATGCGGCACTTTTAAGAAGAAGAATAAGGGATAGCCGCTTTTCAATGGAAATGTATACTGTAGGGGAACGCTC
CAGGACAGATGTTGCTGTGTGCTATATTGATGATAAGGTTGATAAGAAGCTGCTTGAAAGAATTGAGAATCTGATAAGCA
GCATAGAGGTTGAGGCGCTCACTATGAATATAGAGAGCCTTGCGGAATGTATGTTTAAGGGAAAATGGATTAATCCGTTT
CCTAAGTATAAATATTCCGAAAGACCCGATACCGCTGCAGCAGCACTTTTTGATGGAAATATAGTTATTATGGTAGATAC
ATCACCTGCAGTAATGATAATTCCAACAAATGTATTTGATATAATAGAAGAAGCAGATGATTTTAATTTTTCGCCAATGA
TAGGAACTTATATAAGACTGTCGAGGTTCTTCTTTACATTGCTTACGGTTTTTCTTACACCTGTATGGCTTTTGCTTGAG
AGCAATCCACAGTGGGTGCCTGAATGGCTGAAATTCATAACGATAAGTGAGAATATAACGGTTCCGGTTATATTGCAGCT
TTTTATTCTTGAACTTGCAGTTGACGGGCTTAAGCTGGCGGCGGTCAATACGCCAGGAATGCTGTCGACACCTTTGAGTA
TTCTTGCAGGTATTGTTGTGGGAGAATACGCTGTGGAGTCCGGGTGGTTTAATTCAGAATCGCTTCTTTATATGGCAGTT
GTAACGGTTGGAACTTACTCACAGGCAAGTTTTGAGATGGGATATGCATTAAAATTCATAAGAATAGTCAATCTGATTCT
GGTGCAGTTCTTTGGAAGAATCGGACTTCTGGCAGGAGCCATATTTGCGATAGTGCTTGTATGCTTTAACAGGACAATAT
CAGGGAAAAGCTACATTTATCCGGTGATACCTTTTAACAGCCAGATGTTTAAAAGAAAAATTCTTCGGGTACGACTGCCA
CACAAAATAAAAAATAACTAG

Upstream 100 bases:

>100_bases
AACTAATAGCAGAATAAATGTGTCAAATGTGGACATTCTATAAGGGCAGGGCGTAAGTCCTGCCCTTTTCGTGCTTTGAC
AGGGTTAGTGAAATTGAGAG

Downstream 100 bases:

>100_bases
CAATATATGGCGTATTAAGTGTTAAAATATGACTTAACACGCCATATATTGCTAATTAATTGCAAATGTGATACAATACA
AAAAACATTTGAATAAGATA

Product: stage V sporulation protein AF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MIQSAVENVQVKGVSMTDFTTNIDMNVRMMNEKLRVDRNFDILQRDVLIGGKRTHFYFIDGFVQEETIEKLVQFFYSLKE
SDIKDIDTFLEVGMPYTEIEKNGHYDEVEKAFLSGQTVMIIDGFDECILIDCRTYPMRSVTEPYKDKVLRGSRDGFVETL
VCNAALLRRRIRDSRFSMEMYTVGERSRTDVAVCYIDDKVDKKLLERIENLISSIEVEALTMNIESLAECMFKGKWINPF
PKYKYSERPDTAAAALFDGNIVIMVDTSPAVMIIPTNVFDIIEEADDFNFSPMIGTYIRLSRFFFTLLTVFLTPVWLLLE
SNPQWVPEWLKFITISENITVPVILQLFILELAVDGLKLAAVNTPGMLSTPLSILAGIVVGEYAVESGWFNSESLLYMAV
VTVGTYSQASFEMGYALKFIRIVNLILVQFFGRIGLLAGAIFAIVLVCFNRTISGKSYIYPVIPFNSQMFKRKILRVRLP
HKIKNN

Sequences:

>Translated_486_residues
MIQSAVENVQVKGVSMTDFTTNIDMNVRMMNEKLRVDRNFDILQRDVLIGGKRTHFYFIDGFVQEETIEKLVQFFYSLKE
SDIKDIDTFLEVGMPYTEIEKNGHYDEVEKAFLSGQTVMIIDGFDECILIDCRTYPMRSVTEPYKDKVLRGSRDGFVETL
VCNAALLRRRIRDSRFSMEMYTVGERSRTDVAVCYIDDKVDKKLLERIENLISSIEVEALTMNIESLAECMFKGKWINPF
PKYKYSERPDTAAAALFDGNIVIMVDTSPAVMIIPTNVFDIIEEADDFNFSPMIGTYIRLSRFFFTLLTVFLTPVWLLLE
SNPQWVPEWLKFITISENITVPVILQLFILELAVDGLKLAAVNTPGMLSTPLSILAGIVVGEYAVESGWFNSESLLYMAV
VTVGTYSQASFEMGYALKFIRIVNLILVQFFGRIGLLAGAIFAIVLVCFNRTISGKSYIYPVIPFNSQMFKRKILRVRLP
HKIKNN
>Mature_486_residues
MIQSAVENVQVKGVSMTDFTTNIDMNVRMMNEKLRVDRNFDILQRDVLIGGKRTHFYFIDGFVQEETIEKLVQFFYSLKE
SDIKDIDTFLEVGMPYTEIEKNGHYDEVEKAFLSGQTVMIIDGFDECILIDCRTYPMRSVTEPYKDKVLRGSRDGFVETL
VCNAALLRRRIRDSRFSMEMYTVGERSRTDVAVCYIDDKVDKKLLERIENLISSIEVEALTMNIESLAECMFKGKWINPF
PKYKYSERPDTAAAALFDGNIVIMVDTSPAVMIIPTNVFDIIEEADDFNFSPMIGTYIRLSRFFFTLLTVFLTPVWLLLE
SNPQWVPEWLKFITISENITVPVILQLFILELAVDGLKLAAVNTPGMLSTPLSILAGIVVGEYAVESGWFNSESLLYMAV
VTVGTYSQASFEMGYALKFIRIVNLILVQFFGRIGLLAGAIFAIVLVCFNRTISGKSYIYPVIPFNSQMFKRKILRVRLP
HKIKNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55553; Mature: 55553

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQSAVENVQVKGVSMTDFTTNIDMNVRMMNEKLRVDRNFDILQRDVLIGGKRTHFYFID
CCCHHHCCEEEEEEEEECEEECCCEEEEEECHHHCCCCCHHHHHHHHEECCCEEEEEEEE
GFVQEETIEKLVQFFYSLKESDIKDIDTFLEVGMPYTEIEKNGHYDEVEKAFLSGQTVMI
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCEEEE
IDGFDECILIDCRTYPMRSVTEPYKDKVLRGSRDGFVETLVCNAALLRRRIRDSRFSMEM
EECCCCEEEEECCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEE
YTVGERSRTDVAVCYIDDKVDKKLLERIENLISSIEVEALTMNIESLAECMFKGKWINPF
EECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCCCC
PKYKYSERPDTAAAALFDGNIVIMVDTSPAVMIIPTNVFDIIEEADDFNFSPMIGTYIRL
CCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
SRFFFTLLTVFLTPVWLLLESNPQWVPEWLKFITISENITVPVILQLFILELAVDGLKLA
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCEEEE
AVNTPGMLSTPLSILAGIVVGEYAVESGWFNSESLLYMAVVTVGTYSQASFEMGYALKFI
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHH
RIVNLILVQFFGRIGLLAGAIFAIVLVCFNRTISGKSYIYPVIPFNSQMFKRKILRVRLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCC
HKIKNN
HHHCCC
>Mature Secondary Structure
MIQSAVENVQVKGVSMTDFTTNIDMNVRMMNEKLRVDRNFDILQRDVLIGGKRTHFYFID
CCCHHHCCEEEEEEEEECEEECCCEEEEEECHHHCCCCCHHHHHHHHEECCCEEEEEEEE
GFVQEETIEKLVQFFYSLKESDIKDIDTFLEVGMPYTEIEKNGHYDEVEKAFLSGQTVMI
CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHCCCEEEE
IDGFDECILIDCRTYPMRSVTEPYKDKVLRGSRDGFVETLVCNAALLRRRIRDSRFSMEM
EECCCCEEEEECCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEE
YTVGERSRTDVAVCYIDDKVDKKLLERIENLISSIEVEALTMNIESLAECMFKGKWINPF
EECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHEEECHHHHHHHHHCCCCCCCC
PKYKYSERPDTAAAALFDGNIVIMVDTSPAVMIIPTNVFDIIEEADDFNFSPMIGTYIRL
CCCCCCCCCCCCEEEEECCCEEEEEECCCEEEEEECHHHHHHHHCCCCCCCCHHHHHHHH
SRFFFTLLTVFLTPVWLLLESNPQWVPEWLKFITISENITVPVILQLFILELAVDGLKLA
HHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHEEECCCCCHHHHHHHHHHHHHHCCEEEE
AVNTPGMLSTPLSILAGIVVGEYAVESGWFNSESLLYMAVVTVGTYSQASFEMGYALKFI
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHH
RIVNLILVQFFGRIGLLAGAIFAIVLVCFNRTISGKSYIYPVIPFNSQMFKRKILRVRLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCC
HKIKNN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]