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The map label for this gene is pyrK [H]

Identifier: 238916476

GI number: 238916476

Start: 540059

End: 540871

Strand: Direct

Name: pyrK [H]

Synonym: EUBELI_00533

Alternate gene names: 238916476

Gene position: 540059-540871 (Clockwise)

Preceding gene: 238916475

Following gene: 238916477

Centisome position: 25.19

GC content: 39.11

Gene sequence:

>813_bases
ATGGAGATTATTATGGCGTACAGAGAAAATGCGAAGATTCTTAAGGCAGATTGTCTTGCTGACGGAGTCTATGAGATATG
GTTTGAAACAAAGGATATTGCTAAGACCGCTAAGGCAGGACAGTTTATATCAGTATATTCTAATGATGGTTCAAGAATGT
TACCAAGACCTATCAGTATATGTAAGGTTGAGAATAATAATTTAAGAATTGTATTCAGAGTTGCCGGCAAGGGAACAGAA
GAGTTTTCTAAGATGAAGGCAGGAGAATATCTTGATATTCAGGGACCTCTTGGCAATGGATATAATCTTGGAAAAATTGC
TGCAGAGATTAAGGCAGAAGGCAGAAGCTTTGATAAGGCTATTCTTTTCGGTGGCGGAATAGGTATTCCTCCTATGCTTG
AGCTTGCAAGAAGATTAGACTGCCACAAGAATGTTGTAGTTGGTTACAGAAACAGCCAGACTTTCCTTAAGGAAGATTTT
GAAGCAGTTGCTGATACAGATGTGTATATTGCAACTGAAGATGGAAGCGTTGGAACAAAGGGAAATGTATTAGATGCTGT
AAAACAGGAAAAGGTTGAGGCAGATGTTATATTTGCATGTGGACCAACTCCTATGCTTCGTGCAATTAAGGCATATGCAC
TTGAGAATGATATTCCGTGTTATGTTTCATTAGAAGAGAAGATGGCATGCGGAATTGGTGCATGTCTTGCATGTGTATGT
AAATCAACTGGGATTGACGACCATTCTCAGGTTAAGAATAAGAGAGTGTGCAAGGAAGGTCCGGTATTTAATGTTAAGGA
GGTAGAACTGTAA

Upstream 100 bases:

>100_bases
GAATTTCGGAGAAGCTTCAAGACAGGCTGCTCTTGATATGATTGCTGATATCAACGGAGCACTTGGCAAGTAATTATACA
TATTTATACACAGTTTAATA

Downstream 100 bases:

>100_bases
TGAGCGATATTAATATGTCAGTCAATATTGCAGGAGTTGAATTAAAGAATCCTGTGACAGTTGCTTCCGGAACATTCGGA
TCAGGCATGGAGTATGGGGA

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MEIIMAYRENAKILKADCLADGVYEIWFETKDIAKTAKAGQFISVYSNDGSRMLPRPISICKVENNNLRIVFRVAGKGTE
EFSKMKAGEYLDIQGPLGNGYNLGKIAAEIKAEGRSFDKAILFGGGIGIPPMLELARRLDCHKNVVVGYRNSQTFLKEDF
EAVADTDVYIATEDGSVGTKGNVLDAVKQEKVEADVIFACGPTPMLRAIKAYALENDIPCYVSLEEKMACGIGACLACVC
KSTGIDDHSQVKNKRVCKEGPVFNVKEVEL

Sequences:

>Translated_270_residues
MEIIMAYRENAKILKADCLADGVYEIWFETKDIAKTAKAGQFISVYSNDGSRMLPRPISICKVENNNLRIVFRVAGKGTE
EFSKMKAGEYLDIQGPLGNGYNLGKIAAEIKAEGRSFDKAILFGGGIGIPPMLELARRLDCHKNVVVGYRNSQTFLKEDF
EAVADTDVYIATEDGSVGTKGNVLDAVKQEKVEADVIFACGPTPMLRAIKAYALENDIPCYVSLEEKMACGIGACLACVC
KSTGIDDHSQVKNKRVCKEGPVFNVKEVEL
>Mature_270_residues
MEIIMAYRENAKILKADCLADGVYEIWFETKDIAKTAKAGQFISVYSNDGSRMLPRPISICKVENNNLRIVFRVAGKGTE
EFSKMKAGEYLDIQGPLGNGYNLGKIAAEIKAEGRSFDKAILFGGGIGIPPMLELARRLDCHKNVVVGYRNSQTFLKEDF
EAVADTDVYIATEDGSVGTKGNVLDAVKQEKVEADVIFACGPTPMLRAIKAYALENDIPCYVSLEEKMACGIGACLACVC
KSTGIDDHSQVKNKRVCKEGPVFNVKEVEL

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 29522; Mature: 29522

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIIMAYRENAKILKADCLADGVYEIWFETKDIAKTAKAGQFISVYSNDGSRMLPRPISI
CEEEEEECCCCCEEEHHHHHCCHHEEEECCHHHHHHHCCCCEEEEEECCCCEECCCCCEE
CKVENNNLRIVFRVAGKGTEEFSKMKAGEYLDIQGPLGNGYNLGKIAAEIKAEGRSFDKA
EEEECCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
ILFGGGIGIPPMLELARRLDCHKNVVVGYRNSQTFLKEDFEAVADTDVYIATEDGSVGTK
EEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
GNVLDAVKQEKVEADVIFACGPTPMLRAIKAYALENDIPCYVSLEEKMACGIGACLACVC
CCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH
KSTGIDDHSQVKNKRVCKEGPVFNVKEVEL
HCCCCCCHHHHHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure
MEIIMAYRENAKILKADCLADGVYEIWFETKDIAKTAKAGQFISVYSNDGSRMLPRPISI
CEEEEEECCCCCEEEHHHHHCCHHEEEECCHHHHHHHCCCCEEEEEECCCCEECCCCCEE
CKVENNNLRIVFRVAGKGTEEFSKMKAGEYLDIQGPLGNGYNLGKIAAEIKAEGRSFDKA
EEEECCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCEE
ILFGGGIGIPPMLELARRLDCHKNVVVGYRNSQTFLKEDFEAVADTDVYIATEDGSVGTK
EEEECCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCCC
GNVLDAVKQEKVEADVIFACGPTPMLRAIKAYALENDIPCYVSLEEKMACGIGACLACVC
CCHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHH
KSTGIDDHSQVKNKRVCKEGPVFNVKEVEL
HCCCCCCHHHHHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]