| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238916410
Identifier: 238916410
GI number: 238916410
Start: 477510
End: 478184
Strand: Direct
Name: 238916410
Synonym: EUBELI_00466
Alternate gene names: NA
Gene position: 477510-478184 (Clockwise)
Preceding gene: 238916409
Following gene: 238916411
Centisome position: 22.27
GC content: 38.96
Gene sequence:
>675_bases ATGACACATTTGCAGGAAGAACTGTTTAAGTTACAGGATACGGCGTACAGGGATTTTCACAGCAGCCTTATGCCGGGGGT AGATAAAGAGGCTGTTATAGGAGTAAGAACCCCGGTTTTAAGAGCATTTGCAAAGAAATTCTCTAAGACAGAGGAGGCGG AACAGTTTATGACGGAGCTGCCACATAAGTATTATGAAGAAAATAATCTTCATATGATGCTGATTGCACAGATTAAGGAT TATAATATGTGCGTTAGTGAAACAGAGAAGTTTCTGCCATATATTGATAACTGGGCAACCTGTGATTCACCGCTTCCAAA ATGTTTTGATAAGAATAAAGAAGATATTATTGTGAGAGCTAAGAATTGGATTGCCACAGATGACACATATGTTAAAAGAT ACGGAATGGGTGTTATGATGCGTCTGTTTCTTGATGAGGATTTTAAGGAAGAATATATACAGCTTGTTGCAGGTGTTAAG TCAGAGGAGTACTATGTAAATATGATGATTGCATGGTATATGGCTACAGCACTTGCTAAACAGTGGGATGCGGCGATTCC TTATATACAGGAACACAGGCTTTCTGAATGGGTACACAGAAAGTCAATACAGAAGGCTGTAGAGAGTTACCGCATTACAC CAGAGCAGAAGGATTATTTAAAGGGTTTAAGATAA
Upstream 100 bases:
>100_bases GCTTTACGAGGAGCACCGCGACAACGACAGAACGAAGTTCTGGAGTATGAGCTGCTCGCGCAACCCGCGGCGATGAGCTA GCTCACATAGGAGGGGAATA
Downstream 100 bases:
>100_bases GGTTATGAAATCAAATGAAATAGATATGACGACAGGTTCCCTGCCAAAGAAAATATTAATGTATTCAGTTCCGCTTATGT TGTCAAATGTACTGCAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTHLQEELFKLQDTAYRDFHSSLMPGVDKEAVIGVRTPVLRAFAKKFSKTEEAEQFMTELPHKYYEENNLHMMLIAQIKD YNMCVSETEKFLPYIDNWATCDSPLPKCFDKNKEDIIVRAKNWIATDDTYVKRYGMGVMMRLFLDEDFKEEYIQLVAGVK SEEYYVNMMIAWYMATALAKQWDAAIPYIQEHRLSEWVHRKSIQKAVESYRITPEQKDYLKGLR
Sequences:
>Translated_224_residues MTHLQEELFKLQDTAYRDFHSSLMPGVDKEAVIGVRTPVLRAFAKKFSKTEEAEQFMTELPHKYYEENNLHMMLIAQIKD YNMCVSETEKFLPYIDNWATCDSPLPKCFDKNKEDIIVRAKNWIATDDTYVKRYGMGVMMRLFLDEDFKEEYIQLVAGVK SEEYYVNMMIAWYMATALAKQWDAAIPYIQEHRLSEWVHRKSIQKAVESYRITPEQKDYLKGLR >Mature_223_residues THLQEELFKLQDTAYRDFHSSLMPGVDKEAVIGVRTPVLRAFAKKFSKTEEAEQFMTELPHKYYEENNLHMMLIAQIKDY NMCVSETEKFLPYIDNWATCDSPLPKCFDKNKEDIIVRAKNWIATDDTYVKRYGMGVMMRLFLDEDFKEEYIQLVAGVKS EEYYVNMMIAWYMATALAKQWDAAIPYIQEHRLSEWVHRKSIQKAVESYRITPEQKDYLKGLR
Specific function: Unknown
COG id: COG4912
COG function: function code L; Predicted DNA alkylation repair enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26572; Mature: 26441
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLQEELFKLQDTAYRDFHSSLMPGVDKEAVIGVRTPVLRAFAKKFSKTEEAEQFMTEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC PHKYYEENNLHMMLIAQIKDYNMCVSETEKFLPYIDNWATCDSPLPKCFDKNKEDIIVRA CHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCCCCCCEEEEE KNWIATDDTYVKRYGMGVMMRLFLDEDFKEEYIQLVAGVKSEEYYVNMMIAWYMATALAK CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QWDAAIPYIQEHRLSEWVHRKSIQKAVESYRITPEQKDYLKGLR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC >Mature Secondary Structure THLQEELFKLQDTAYRDFHSSLMPGVDKEAVIGVRTPVLRAFAKKFSKTEEAEQFMTEL CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHC PHKYYEENNLHMMLIAQIKDYNMCVSETEKFLPYIDNWATCDSPLPKCFDKNKEDIIVRA CHHHHCCCCCEEEEEEECCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHCCCCCCEEEEE KNWIATDDTYVKRYGMGVMMRLFLDEDFKEEYIQLVAGVKSEEYYVNMMIAWYMATALAK CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QWDAAIPYIQEHRLSEWVHRKSIQKAVESYRITPEQKDYLKGLR HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA