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The map label for this gene is rfaB [H]

Identifier: 238916229

GI number: 238916229

Start: 293381

End: 294442

Strand: Direct

Name: rfaB [H]

Synonym: EUBELI_00263

Alternate gene names: 238916229

Gene position: 293381-294442 (Clockwise)

Preceding gene: 238916228

Following gene: 238916230

Centisome position: 13.68

GC content: 35.5

Gene sequence:

>1062_bases
ATGATAAGAGTTGATATATTATCTCCAGTGGGTGGGAAAGTCGGGGGAATAGAGAATGTTATTAAGTTATGGACAAAGAA
TCTGTCGCAGCCAGATTATGTCGTAAGAGTAATACATATGTCGCCGGGAACTAAATACCTTGATGGTTATGAGTACGCAT
ATGCATTCTGTGATAAGGAAGATGAAGATTTTAATGAAAAGCTTAAAAGATTTGTAAAAAATTATGCAGGGTTTATTAAT
GAATACGGCGCACCAGATGTATGTATAGCTACAAACTGGCCGGTTATGTGTGTTGTTGCAGAAACTGTAAGAAGAATATT
AAAATCTGATTATAAAATTATTTCATGGGTGCATAGCAGCATTGCAGAATATAAGAAAGCAGGTCTTGGTGGGATTGATG
AAATGCTATGTGCGGATGCACATTTATGCATAAGCAGGAATAATGAACGGCATTTACTGGAATATGTGGAAAGAACGAAA
GTATATTATGTTGGAAACCCGGTTATTATGCAGTCATTTATTGAAAAAACACATGGTGAAAAGCAATTGTGTTATGTGGG
CAGATTACAGGAAATAAAGCGGGTTGATATTATTTTAGAAGCTTTATACAGAGCACATAATAAGTGGAATTTAAGAATTA
TTGGAGATGGGGAATCTGCACAGGATCTTAAGGAAATAACCAGGTATCTGAAATTACAGGACAGAGTTGAATATACAGGA
TGGAAAGAAAATCCGTGGGAGTATTGCAGGGATGCATGTGCATTAGTTGCTGCATCAGAATATGAAGGATTTATGCTTAC
AGGGGCGGAAGCAATGTCTATGGGATTGACGGTTATATCAACACCTGTTGAAGGGTTAATAGATTATCTTATACCGGGAA
AGAATGGCTATCTGTTTGAAAAAAATAATGCTGAAGAGCTTGCACAGGTTCTTGATTATTTATATGATGGGAAATTGCCA
ATGTGTGATAGAAAAGCATGCAGAGAGTCCGTTGATAAATACAGCGAGAATAATTATATAAAAAAAATTAAAAAAAATTT
AGAAGAGTGGTTAAGTATTTGA

Upstream 100 bases:

>100_bases
ATGAATATTCTATAGACGGTATACAGACGGGAATGAAAATTATGCGGGATAAGTCAGAAGATTATGTGAAAGTTATATGT
ATTGATGAAGAGGACTTTTA

Downstream 100 bases:

>100_bases
AATGCTGTCCGATAAATAATACATAAGTGATAAACAGATAAGAATAATAAATAATGTTTATTATCTGATATAAAAATGGA
GTTATACATATCAAGGAGGA

Product: galactosyltransferase

Products: NA

Alternate protein names: UDP-D-galactose--(Glucosyl)lipopolysaccharide-alpha-1,3-D-galactosyltransferase [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MIRVDILSPVGGKVGGIENVIKLWTKNLSQPDYVVRVIHMSPGTKYLDGYEYAYAFCDKEDEDFNEKLKRFVKNYAGFIN
EYGAPDVCIATNWPVMCVVAETVRRILKSDYKIISWVHSSIAEYKKAGLGGIDEMLCADAHLCISRNNERHLLEYVERTK
VYYVGNPVIMQSFIEKTHGEKQLCYVGRLQEIKRVDIILEALYRAHNKWNLRIIGDGESAQDLKEITRYLKLQDRVEYTG
WKENPWEYCRDACALVAASEYEGFMLTGAEAMSMGLTVISTPVEGLIDYLIPGKNGYLFEKNNAEELAQVLDYLYDGKLP
MCDRKACRESVDKYSENNYIKKIKKNLEEWLSI

Sequences:

>Translated_353_residues
MIRVDILSPVGGKVGGIENVIKLWTKNLSQPDYVVRVIHMSPGTKYLDGYEYAYAFCDKEDEDFNEKLKRFVKNYAGFIN
EYGAPDVCIATNWPVMCVVAETVRRILKSDYKIISWVHSSIAEYKKAGLGGIDEMLCADAHLCISRNNERHLLEYVERTK
VYYVGNPVIMQSFIEKTHGEKQLCYVGRLQEIKRVDIILEALYRAHNKWNLRIIGDGESAQDLKEITRYLKLQDRVEYTG
WKENPWEYCRDACALVAASEYEGFMLTGAEAMSMGLTVISTPVEGLIDYLIPGKNGYLFEKNNAEELAQVLDYLYDGKLP
MCDRKACRESVDKYSENNYIKKIKKNLEEWLSI
>Mature_353_residues
MIRVDILSPVGGKVGGIENVIKLWTKNLSQPDYVVRVIHMSPGTKYLDGYEYAYAFCDKEDEDFNEKLKRFVKNYAGFIN
EYGAPDVCIATNWPVMCVVAETVRRILKSDYKIISWVHSSIAEYKKAGLGGIDEMLCADAHLCISRNNERHLLEYVERTK
VYYVGNPVIMQSFIEKTHGEKQLCYVGRLQEIKRVDIILEALYRAHNKWNLRIIGDGESAQDLKEITRYLKLQDRVEYTG
WKENPWEYCRDACALVAASEYEGFMLTGAEAMSMGLTVISTPVEGLIDYLIPGKNGYLFEKNNAEELAQVLDYLYDGKLP
MCDRKACRESVDKYSENNYIKKIKKNLEEWLSI

Specific function: Adds a galactose goup to a glucose group of LPS [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI226510984, Length=352, Percent_Identity=26.4204545454545, Blast_Score=115, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 40610; Mature: 40610

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVDILSPVGGKVGGIENVIKLWTKNLSQPDYVVRVIHMSPGTKYLDGYEYAYAFCDKE
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCC
DEDFNEKLKRFVKNYAGFINEYGAPDVCIATNWPVMCVVAETVRRILKSDYKIISWVHSS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
IAEYKKAGLGGIDEMLCADAHLCISRNNERHLLEYVERTKVYYVGNPVIMQSFIEKTHGE
HHHHHHCCCCCHHHHHHHCHHHEECCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCC
KQLCYVGRLQEIKRVDIILEALYRAHNKWNLRIIGDGESAQDLKEITRYLKLQDRVEYTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
WKENPWEYCRDACALVAASEYEGFMLTGAEAMSMGLTVISTPVEGLIDYLIPGKNGYLFE
CCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCHHHHHCCHHHHHHHHCCCCCCEEEE
KNNAEELAQVLDYLYDGKLPMCDRKACRESVDKYSENNYIKKIKKNLEEWLSI
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIRVDILSPVGGKVGGIENVIKLWTKNLSQPDYVVRVIHMSPGTKYLDGYEYAYAFCDKE
CEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCC
DEDFNEKLKRFVKNYAGFINEYGAPDVCIATNWPVMCVVAETVRRILKSDYKIISWVHSS
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHH
IAEYKKAGLGGIDEMLCADAHLCISRNNERHLLEYVERTKVYYVGNPVIMQSFIEKTHGE
HHHHHHCCCCCHHHHHHHCHHHEECCCCHHHHHHHHHHCEEEECCCHHHHHHHHHHHCCC
KQLCYVGRLQEIKRVDIILEALYRAHNKWNLRIIGDGESAQDLKEITRYLKLQDRVEYTG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCC
WKENPWEYCRDACALVAASEYEGFMLTGAEAMSMGLTVISTPVEGLIDYLIPGKNGYLFE
CCCCHHHHHHHHHHHHHHCCCCCEEEECHHHHHHCHHHHHCCHHHHHHHHCCCCCCEEEE
KNNAEELAQVLDYLYDGKLPMCDRKACRESVDKYSENNYIKKIKKNLEEWLSI
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1624461; 8041620; 9278503 [H]