| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916221
Identifier: 238916221
GI number: 238916221
Start: 285817
End: 286449
Strand: Direct
Name: 238916221
Synonym: EUBELI_00255
Alternate gene names: NA
Gene position: 285817-286449 (Clockwise)
Preceding gene: 238916220
Following gene: 238916222
Centisome position: 13.33
GC content: 31.6
Gene sequence:
>633_bases ATGAGTAAAATAATAGTGTTTGGAACGGGGAAATATGGTAAAGAAGCATATGATTTTTTTGGAGACGATAATGTTTTATG TTTTGCAGACAATAATGCGGCATTAACAGGGAAATATCTGTATGAGAAGGAAATTATTTTGCCTAGTGATATACAATCTC ATTATAAGGAGTACTTAATTATTCTTGCGGCTAGGGAAGAATTATGCATTGAAATGGAATATCAGTTGATGAAGATGGGA ATTGAAAATTCATTGAATTTTATTTTTATCAGAGACTATATTCTAAGTGGTCGGATAGATTTTAACGAATTTATTGATAG ATACCTTGATGATGCATATATTTATAAGCTTAAATATAAGCAAGAGTTAAGGAAAGAAAAGCAGTGTTTGGAGAAAATAG AATTTTTTCAGCAGATTGCAGATATAAGGCATTTAAAACCAGCAAGGGGAAAGTTAAGAAAAAGACAGAAAGAAAGCTTG GATTTGTTAATAAAGGTTGATAGATATGCTAGGAATATAGGGCTTAATGTTATTCTTGAAGGAGGAAATCTTTTAGGCGC AATTCGGAATGGGGGATTTGTTCCATGGGATGATGATATAGATGTTGTTATGTTACGGAATGAATACAATTAG
Upstream 100 bases:
>100_bases CGTAGGAAAGAAAAATAATAGAAATATAGAGAGAATATTAAAAGATGATAATATAAAGAATATTCTTTATGTGGATTAAA CAGCAGGATATGGATAAGTT
Downstream 100 bases:
>100_bases TTTATTCAATATTTGTATCAGAATGGGCTGCTTCTGATTCCGGATTCATCACCTGGGGACTACAAAAAAATCAATTTTCA GATAAGAAACTTAATAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSKIIVFGTGKYGKEAYDFFGDDNVLCFADNNAALTGKYLYEKEIILPSDIQSHYKEYLIILAAREELCIEMEYQLMKMG IENSLNFIFIRDYILSGRIDFNEFIDRYLDDAYIYKLKYKQELRKEKQCLEKIEFFQQIADIRHLKPARGKLRKRQKESL DLLIKVDRYARNIGLNVILEGGNLLGAIRNGGFVPWDDDIDVVMLRNEYN
Sequences:
>Translated_210_residues MSKIIVFGTGKYGKEAYDFFGDDNVLCFADNNAALTGKYLYEKEIILPSDIQSHYKEYLIILAAREELCIEMEYQLMKMG IENSLNFIFIRDYILSGRIDFNEFIDRYLDDAYIYKLKYKQELRKEKQCLEKIEFFQQIADIRHLKPARGKLRKRQKESL DLLIKVDRYARNIGLNVILEGGNLLGAIRNGGFVPWDDDIDVVMLRNEYN >Mature_209_residues SKIIVFGTGKYGKEAYDFFGDDNVLCFADNNAALTGKYLYEKEIILPSDIQSHYKEYLIILAAREELCIEMEYQLMKMGI ENSLNFIFIRDYILSGRIDFNEFIDRYLDDAYIYKLKYKQELRKEKQCLEKIEFFQQIADIRHLKPARGKLRKRQKESLD LLIKVDRYARNIGLNVILEGGNLLGAIRNGGFVPWDDDIDVVMLRNEYN
Specific function: Unknown
COG id: COG3475
COG function: function code M; LPS biosynthesis protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24712; Mature: 24581
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIIVFGTGKYGKEAYDFFGDDNVLCFADNNAALTGKYLYEKEIILPSDIQSHYKEYLI CCEEEEEECCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHEE ILAAREELCIEMEYQLMKMGIENSLNFIFIRDYILSGRIDFNEFIDRYLDDAYIYKLKYK EEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEHHH QELRKEKQCLEKIEFFQQIADIRHLKPARGKLRKRQKESLDLLIKVDRYARNIGLNVILE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEHHHHHHCCCEEEEE GGNLLGAIRNGGFVPWDDDIDVVMLRNEYN CCCEEEEECCCCCCCCCCCCCEEEEECCCC >Mature Secondary Structure SKIIVFGTGKYGKEAYDFFGDDNVLCFADNNAALTGKYLYEKEIILPSDIQSHYKEYLI CEEEEEECCCCCCHHHHHCCCCCEEEEECCCCEEEEEEEEEECCCCCHHHHHHHHHHEE ILAAREELCIEMEYQLMKMGIENSLNFIFIRDYILSGRIDFNEFIDRYLDDAYIYKLKYK EEEECHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHCCCCEEEEEHHH QELRKEKQCLEKIEFFQQIADIRHLKPARGKLRKRQKESLDLLIKVDRYARNIGLNVILE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEHHHHHHCCCEEEEE GGNLLGAIRNGGFVPWDDDIDVVMLRNEYN CCCEEEEECCCCCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA