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The map label for this gene is yjiR [C]

Identifier: 238916146

GI number: 238916146

Start: 209752

End: 211089

Strand: Direct

Name: yjiR [C]

Synonym: EUBELI_00180

Alternate gene names: 238916146

Gene position: 209752-211089 (Clockwise)

Preceding gene: 238916145

Following gene: 238916147

Centisome position: 9.78

GC content: 40.28

Gene sequence:

>1338_bases
ATGATTTATGATTTTATAACTAACATGTATTTTACAGGAATGACACATGGGGGTATGATACATTTATCAAGGGCAAAGGA
GCCGGAAGTCTTTAGGGGATTCTGGCTCTTTTTTTGCATTAGCAAGTATTTGAAGGAGGAAATATATATGGAATACGAGA
TTTCTAATCGTTTATCAGGTGTTCATGGTTCGATGATAAGAGAACTTTTTAAGTTAGGAGCAAGCAAGGATATTATATCT
TTTGGCGGTGGCAATCCGTCAGCAGAGACATTCCCATGCAAGGAAATAGAAGAGATAGCAGCGAAGGGTCTTGGCGAGAA
TCCTGTTTCTTTATTACAGTATGGACTGAGTGAAGGTTATACACCTCTGCGTGATACTATGAAGAAATATCTTGAGAAGA
AGGAAGGCTTTGATTTCGAGAATAATGAGCTTTTCATAGTGTCAGGCGGACAGCAGTGTGCGGACCTTACAACTAAGGCA
CTTGTTAATGAAGGAGACGTTGTGCTTACTGAAGAGCCTGCATTTGTAGGCTGCCTTAATACATTCCGTTCTTACGGTGC
AAAGCTTGTAGGAATCCCAATGGAGCAGGACGGAATGAATATAAATGCGCTTGAGGAGGCTTTAAAGGCTAATCCTGATG
CAAAGCTTTTATACACAATTCCATCTTTTCAGAATCCTACAGGAATTACAACTTCTCTTGAGAAGAGAAAAAAAGTATAT
GAGCTTTGCTGCAAATATGATATCGCAATATTAGAGGACAATCCTTATGGTGAATTAAGATTTGCAGGTGAAAATGTGCC
AACTATCAAGTCGATGGATACAGAGGGCAGGGTTATATATGCAGGAAGCTTCTCAAAGGTAATGGCACCTGCATTCCGTC
TTGGTTTTCTTGTGTTTAACAAGTCGCTCACAGGACCGCTTACAGTTGCAAAACAGTGCACAGATGTACATTCAACTGTC
CTTTTCCAGTACATTTGTAATGAATATATTAATAACTATGATTTCGACAAACATCTTGAGGATTCAAGAAAGGTGTATGA
GCACAAATGTAATCTCATGATGGAGTGCATGAAGAAGGAATTCCATCCTTCAGTAACCTTCGGTCACCCTGAGGGCGGAC
TTTTCGTAATGGCATTCCTGCCAGAGGGAATGGATTCTGCACCATTTGTAAGGGAGGCTATTAACAGAGGTGTTCTCTCA
GTTCCGGGAGCAGCGTTCTTAGCAGATGAGAGCCAGAAGTCTAATGGATTCAGACTTAATTATTCGACACCTTCTGATGA
GCAGATTGTTAAGGGAATCGAAATTCTTGGAAAACTTACATATGAGTGGATTAAGTAG

Upstream 100 bases:

>100_bases
CTCCTTTCTCTACCAGGTATAGGAGGGGTAGCACTAAAAATTATATCATAACAATATATAACAAACAAGTATATAAAAAA
TATAAATAATAATCATTGCT

Downstream 100 bases:

>100_bases
GAGGAGTGAAAAGTTATGAAGATAGCAGCATTCAGCGTTCGTCAAGATGAAAAACAGTATTTTGATACATTTGCAAATGT
ATACAAGGTGGAATTACAGA

Product: hypothetical protein

Products: NA

Alternate protein names: AspB-1 [H]

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MIYDFITNMYFTGMTHGGMIHLSRAKEPEVFRGFWLFFCISKYLKEEIYMEYEISNRLSGVHGSMIRELFKLGASKDIIS
FGGGNPSAETFPCKEIEEIAAKGLGENPVSLLQYGLSEGYTPLRDTMKKYLEKKEGFDFENNELFIVSGGQQCADLTTKA
LVNEGDVVLTEEPAFVGCLNTFRSYGAKLVGIPMEQDGMNINALEEALKANPDAKLLYTIPSFQNPTGITTSLEKRKKVY
ELCCKYDIAILEDNPYGELRFAGENVPTIKSMDTEGRVIYAGSFSKVMAPAFRLGFLVFNKSLTGPLTVAKQCTDVHSTV
LFQYICNEYINNYDFDKHLEDSRKVYEHKCNLMMECMKKEFHPSVTFGHPEGGLFVMAFLPEGMDSAPFVREAINRGVLS
VPGAAFLADESQKSNGFRLNYSTPSDEQIVKGIEILGKLTYEWIK

Sequences:

>Translated_445_residues
MIYDFITNMYFTGMTHGGMIHLSRAKEPEVFRGFWLFFCISKYLKEEIYMEYEISNRLSGVHGSMIRELFKLGASKDIIS
FGGGNPSAETFPCKEIEEIAAKGLGENPVSLLQYGLSEGYTPLRDTMKKYLEKKEGFDFENNELFIVSGGQQCADLTTKA
LVNEGDVVLTEEPAFVGCLNTFRSYGAKLVGIPMEQDGMNINALEEALKANPDAKLLYTIPSFQNPTGITTSLEKRKKVY
ELCCKYDIAILEDNPYGELRFAGENVPTIKSMDTEGRVIYAGSFSKVMAPAFRLGFLVFNKSLTGPLTVAKQCTDVHSTV
LFQYICNEYINNYDFDKHLEDSRKVYEHKCNLMMECMKKEFHPSVTFGHPEGGLFVMAFLPEGMDSAPFVREAINRGVLS
VPGAAFLADESQKSNGFRLNYSTPSDEQIVKGIEILGKLTYEWIK
>Mature_445_residues
MIYDFITNMYFTGMTHGGMIHLSRAKEPEVFRGFWLFFCISKYLKEEIYMEYEISNRLSGVHGSMIRELFKLGASKDIIS
FGGGNPSAETFPCKEIEEIAAKGLGENPVSLLQYGLSEGYTPLRDTMKKYLEKKEGFDFENNELFIVSGGQQCADLTTKA
LVNEGDVVLTEEPAFVGCLNTFRSYGAKLVGIPMEQDGMNINALEEALKANPDAKLLYTIPSFQNPTGITTSLEKRKKVY
ELCCKYDIAILEDNPYGELRFAGENVPTIKSMDTEGRVIYAGSFSKVMAPAFRLGFLVFNKSLTGPLTVAKQCTDVHSTV
LFQYICNEYINNYDFDKHLEDSRKVYEHKCNLMMECMKKEFHPSVTFGHPEGGLFVMAFLPEGMDSAPFVREAINRGVLS
VPGAAFLADESQKSNGFRLNYSTPSDEQIVKGIEILGKLTYEWIK

Specific function: Unknown

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI7705897, Length=393, Percent_Identity=29.7709923664122, Blast_Score=168, Evalue=1e-41,
Organism=Homo sapiens, GI33469970, Length=393, Percent_Identity=29.7709923664122, Blast_Score=168, Evalue=1e-41,
Organism=Escherichia coli, GI1790797, Length=382, Percent_Identity=25.3926701570681, Blast_Score=139, Evalue=4e-34,
Organism=Escherichia coli, GI1787710, Length=377, Percent_Identity=23.8726790450928, Blast_Score=136, Evalue=3e-33,
Organism=Escherichia coli, GI1788722, Length=381, Percent_Identity=23.8845144356955, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6321236, Length=492, Percent_Identity=25.2032520325203, Blast_Score=129, Evalue=1e-30,
Organism=Saccharomyces cerevisiae, GI6321929, Length=294, Percent_Identity=27.2108843537415, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6321000, Length=252, Percent_Identity=25, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21356535, Length=397, Percent_Identity=22.1662468513854, Blast_Score=92, Evalue=8e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: NA

Molecular weight: Translated: 49992; Mature: 49992

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYDFITNMYFTGMTHGGMIHLSRAKEPEVFRGFWLFFCISKYLKEEIYMEYEISNRLSG
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCC
VHGSMIRELFKLGASKDIISFGGGNPSAETFPCKEIEEIAAKGLGENPVSLLQYGLSEGY
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC
TPLRDTMKKYLEKKEGFDFENNELFIVSGGQQCADLTTKALVNEGDVVLTEEPAFVGCLN
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHH
TFRSYGAKLVGIPMEQDGMNINALEEALKANPDAKLLYTIPSFQNPTGITTSLEKRKKVY
HHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
ELCCKYDIAILEDNPYGELRFAGENVPTIKSMDTEGRVIYAGSFSKVMAPAFRLGFLVFN
HHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
KSLTGPLTVAKQCTDVHSTVLFQYICNEYINNYDFDKHLEDSRKVYEHKCNLMMECMKKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FHPSVTFGHPEGGLFVMAFLPEGMDSAPFVREAINRGVLSVPGAAFLADESQKSNGFRLN
CCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCCEEEE
YSTPSDEQIVKGIEILGKLTYEWIK
ECCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIYDFITNMYFTGMTHGGMIHLSRAKEPEVFRGFWLFFCISKYLKEEIYMEYEISNRLSG
CHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEHHHHHCC
VHGSMIRELFKLGASKDIISFGGGNPSAETFPCKEIEEIAAKGLGENPVSLLQYGLSEGY
CHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCC
TPLRDTMKKYLEKKEGFDFENNELFIVSGGQQCADLTTKALVNEGDVVLTEEPAFVGCLN
CHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCEEEECCCHHHHHHH
TFRSYGAKLVGIPMEQDGMNINALEEALKANPDAKLLYTIPSFQNPTGITTSLEKRKKVY
HHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH
ELCCKYDIAILEDNPYGELRFAGENVPTIKSMDTEGRVIYAGSFSKVMAPAFRLGFLVFN
HHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCC
KSLTGPLTVAKQCTDVHSTVLFQYICNEYINNYDFDKHLEDSRKVYEHKCNLMMECMKKE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FHPSVTFGHPEGGLFVMAFLPEGMDSAPFVREAINRGVLSVPGAAFLADESQKSNGFRLN
CCCCEEECCCCCCEEEEEECCCCCCCCHHHHHHHHCCCEECCCCCEEECCCCCCCCEEEE
YSTPSDEQIVKGIEILGKLTYEWIK
ECCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8899719; 11427726 [H]