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The map label for this gene is ytcJ [H]

Identifier: 238916075

GI number: 238916075

Start: 120328

End: 121899

Strand: Direct

Name: ytcJ [H]

Synonym: EUBELI_00108

Alternate gene names: 238916075

Gene position: 120328-121899 (Clockwise)

Preceding gene: 238916074

Following gene: 238916076

Centisome position: 5.61

GC content: 39.06

Gene sequence:

>1572_bases
ATGATATGTTATAAGGGAAAGGTTCTTACAGTTGACAGCAATGATACAGTAGCCGGTTATCTCGTTGAGGATAAAGGAAG
AATTGTGTATGTTGGTAACGAACTGCCAGAACAGTATAAGAATGTGCAGACAGTTGAACTCGGAAAGAAGGTGCTGGTTC
CGGCATTCGTAGATACACACCAGCATATGGCATCATTTTCTACATTTCACGCAGGACTTAATGTTATGGATGCAGAGTCA
AATGAAGAGATTGCACAGATGGTTAAAGAATTCGTGCAGTCAAGCGGTAATAAAAAGACACTTATAGCATTCGGTGCGTC
ACCATATTCAGTTAAAGAAGGAAGACTTATAAGCAGGAAAGAATTAGATAAGGTTTGCCCTGATAAGGAAATCATGGTTG
TCAAATATGATGGACATGCGTGTGTAATTAACAGCAAGCTTCTTGATAAGCTGAAGGGGAAAGTAAGTAAGTTAAGAGGT
TATCACGAAGATACCGGCGAGATGAATCAGGAGGCATTCTTTGAATGCTCTAATTACATTACCAATTCACTTTCTATTAT
TGAACTGTTTAAGAATATGCAGAGTGCCATTGATTTTCAGGCGTCTCATGGAATTGGCTGTATTCATACTGTAAGTGGTG
TGGGTTTTACAGGCAATCTTGATATTACATTTGAAAAAATATTTGCAAAATCCTTAACTAATGGATTTCAGGTAAGAGTA
TTCCCACAGTCAATGAATGTTGATGTCGCATTAAAGAGAAAGCTGCCAAGAATAGGCGGGTGTTTTGAATGTGCGCTTGA
TGGATGTTTCGGTTCACACGATGCAGCTATGAATGAACCATATATTGATTCTTTAGGCGGTGACGGAGTACTTTATTATG
ATGATGAAAAGGTTATTGATTTCTGCAAGAAGGCTAACAGAGCCGGACTGCAGATAGAGATGCATGCGATTGGGGATAAA
GCGTTTGACCAGGCATGCAGGGCACTTAAGGCGGCACTTGACGATTATCCAAGAAAAGATCACAGACATGGAATTATACA
TGACTGTCTTCCAACTGAAGAGGGAATTAAGATATGCAGGGACTATAATATACAGATGCCTGTACAGAGCGCTTTCATTA
ACTGGAAACAGGAACCTGATGAGTATCTTGAAAGCATTATGGATAAAGAAAGAACAGAAAGACTTAATCCGCTCAGAACA
TTTAATGAGAACGGAATAGTTGTTTCATGTGGTTCTGATGCTCCATGTACATCACCGGATCCTATTGTATGGATTGACAA
AGCTGTTAATAATATGAATCAGTCTCAGGCAGTATCGGTTCAGGAAGCACTAAGGATGTGTACATATAATGGATATTATG
TAACATTTGACGAGAAGGAAAGAGGAAGTCTTGAGGCAGGAAAGATTGCCGATATGGTGGTTCTTTCAGATGATTTGTAT
TCGGTTGACAAGAAGGACATAAAGAACATTAAGGTAGAGGGACTTATACTTTCAGGAAAGAAGTATGAATTATGCAGAGA
AAATGTAATCAAAGCAGTGATTCGAGGAGTGTTCTCAGGAAACATGGCATAA

Upstream 100 bases:

>100_bases
AGATAGATAATTTTTATGAGCTGGTACAGTTAGATTCTTCTTATAAGGATTATCCGGGACAGGAACAGTAAATGCAGATA
TAAAGGGAAGGTGAATGTCT

Downstream 100 bases:

>100_bases
GGAGATATGTATAATGAGAAAAGAAGAGTTTTATGTATTGAACAGTTTGTATAATGGAAGCATTGGCAGAGCAGGCTGCA
CTTATGATGTTGAGGAGACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MICYKGKVLTVDSNDTVAGYLVEDKGRIVYVGNELPEQYKNVQTVELGKKVLVPAFVDTHQHMASFSTFHAGLNVMDAES
NEEIAQMVKEFVQSSGNKKTLIAFGASPYSVKEGRLISRKELDKVCPDKEIMVVKYDGHACVINSKLLDKLKGKVSKLRG
YHEDTGEMNQEAFFECSNYITNSLSIIELFKNMQSAIDFQASHGIGCIHTVSGVGFTGNLDITFEKIFAKSLTNGFQVRV
FPQSMNVDVALKRKLPRIGGCFECALDGCFGSHDAAMNEPYIDSLGGDGVLYYDDEKVIDFCKKANRAGLQIEMHAIGDK
AFDQACRALKAALDDYPRKDHRHGIIHDCLPTEEGIKICRDYNIQMPVQSAFINWKQEPDEYLESIMDKERTERLNPLRT
FNENGIVVSCGSDAPCTSPDPIVWIDKAVNNMNQSQAVSVQEALRMCTYNGYYVTFDEKERGSLEAGKIADMVVLSDDLY
SVDKKDIKNIKVEGLILSGKKYELCRENVIKAVIRGVFSGNMA

Sequences:

>Translated_523_residues
MICYKGKVLTVDSNDTVAGYLVEDKGRIVYVGNELPEQYKNVQTVELGKKVLVPAFVDTHQHMASFSTFHAGLNVMDAES
NEEIAQMVKEFVQSSGNKKTLIAFGASPYSVKEGRLISRKELDKVCPDKEIMVVKYDGHACVINSKLLDKLKGKVSKLRG
YHEDTGEMNQEAFFECSNYITNSLSIIELFKNMQSAIDFQASHGIGCIHTVSGVGFTGNLDITFEKIFAKSLTNGFQVRV
FPQSMNVDVALKRKLPRIGGCFECALDGCFGSHDAAMNEPYIDSLGGDGVLYYDDEKVIDFCKKANRAGLQIEMHAIGDK
AFDQACRALKAALDDYPRKDHRHGIIHDCLPTEEGIKICRDYNIQMPVQSAFINWKQEPDEYLESIMDKERTERLNPLRT
FNENGIVVSCGSDAPCTSPDPIVWIDKAVNNMNQSQAVSVQEALRMCTYNGYYVTFDEKERGSLEAGKIADMVVLSDDLY
SVDKKDIKNIKVEGLILSGKKYELCRENVIKAVIRGVFSGNMA
>Mature_523_residues
MICYKGKVLTVDSNDTVAGYLVEDKGRIVYVGNELPEQYKNVQTVELGKKVLVPAFVDTHQHMASFSTFHAGLNVMDAES
NEEIAQMVKEFVQSSGNKKTLIAFGASPYSVKEGRLISRKELDKVCPDKEIMVVKYDGHACVINSKLLDKLKGKVSKLRG
YHEDTGEMNQEAFFECSNYITNSLSIIELFKNMQSAIDFQASHGIGCIHTVSGVGFTGNLDITFEKIFAKSLTNGFQVRV
FPQSMNVDVALKRKLPRIGGCFECALDGCFGSHDAAMNEPYIDSLGGDGVLYYDDEKVIDFCKKANRAGLQIEMHAIGDK
AFDQACRALKAALDDYPRKDHRHGIIHDCLPTEEGIKICRDYNIQMPVQSAFINWKQEPDEYLESIMDKERTERLNPLRT
FNENGIVVSCGSDAPCTSPDPIVWIDKAVNNMNQSQAVSVQEALRMCTYNGYYVTFDEKERGSLEAGKIADMVVLSDDLY
SVDKKDIKNIKVEGLILSGKKYELCRENVIKAVIRGVFSGNMA

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58328; Mature: 58328

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MICYKGKVLTVDSNDTVAGYLVEDKGRIVYVGNELPEQYKNVQTVELGKKVLVPAFVDTH
CEEECCEEEEECCCCCEEEEEEECCCCEEEECCCCHHHHCCCEEEHHCCCEEEHHHHHHH
QHMASFSTFHAGLNVMDAESNEEIAQMVKEFVQSSGNKKTLIAFGASPYSVKEGRLISRK
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECHH
ELDKVCPDKEIMVVKYDGHACVINSKLLDKLKGKVSKLRGYHEDTGEMNQEAFFECSNYI
HHHHHCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TNSLSIIELFKNMQSAIDFQASHGIGCIHTVSGVGFTGNLDITFEKIFAKSLTNGFQVRV
HCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCCCEECCCEEHHHHHHHHHHCCCCEEEE
FPQSMNVDVALKRKLPRIGGCFECALDGCFGSHDAAMNEPYIDSLGGDGVLYYDDEKVID
ECCCCCEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEEEECCHHHHH
FCKKANRAGLQIEMHAIGDKAFDQACRALKAALDDYPRKDHRHGIIHDCLPTEEGIKICR
HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHH
DYNIQMPVQSAFINWKQEPDEYLESIMDKERTERLNPLRTFNENGIVVSCGSDAPCTSPD
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCEEEECCCCCCCCCCC
PIVWIDKAVNNMNQSQAVSVQEALRMCTYNGYYVTFDEKERGSLEAGKIADMVVLSDDLY
CEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH
SVDKKDIKNIKVEGLILSGKKYELCRENVIKAVIRGVFSGNMA
HCCHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MICYKGKVLTVDSNDTVAGYLVEDKGRIVYVGNELPEQYKNVQTVELGKKVLVPAFVDTH
CEEECCEEEEECCCCCEEEEEEECCCCEEEECCCCHHHHCCCEEEHHCCCEEEHHHHHHH
QHMASFSTFHAGLNVMDAESNEEIAQMVKEFVQSSGNKKTLIAFGASPYSVKEGRLISRK
HHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEECHH
ELDKVCPDKEIMVVKYDGHACVINSKLLDKLKGKVSKLRGYHEDTGEMNQEAFFECSNYI
HHHHHCCCCCEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
TNSLSIIELFKNMQSAIDFQASHGIGCIHTVSGVGFTGNLDITFEKIFAKSLTNGFQVRV
HCCHHHHHHHHHHHHHHCCHHCCCCEEEEECCCCCEECCCEEHHHHHHHHHHCCCCEEEE
FPQSMNVDVALKRKLPRIGGCFECALDGCFGSHDAAMNEPYIDSLGGDGVLYYDDEKVID
ECCCCCEEEEEHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCEEEEECCHHHHH
FCKKANRAGLQIEMHAIGDKAFDQACRALKAALDDYPRKDHRHGIIHDCLPTEEGIKICR
HHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHH
DYNIQMPVQSAFINWKQEPDEYLESIMDKERTERLNPLRTFNENGIVVSCGSDAPCTSPD
CCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHEECCCCEEEECCCCCCCCCCC
PIVWIDKAVNNMNQSQAVSVQEALRMCTYNGYYVTFDEKERGSLEAGKIADMVVLSDDLY
CEEEEEHHHCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEEEEEECCCHH
SVDKKDIKNIKVEGLILSGKKYELCRENVIKAVIRGVFSGNMA
HCCHHHHCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]