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The map label for this gene is licC [H]

Identifier: 238916074

GI number: 238916074

Start: 119378

End: 120298

Strand: Direct

Name: licC [H]

Synonym: EUBELI_00107

Alternate gene names: 238916074

Gene position: 119378-120298 (Clockwise)

Preceding gene: 238916073

Following gene: 238916075

Centisome position: 5.57

GC content: 34.85

Gene sequence:

>921_bases
ATGAATCGTTATCAGTTTGAAGTACTTACATATATTGAAAAGAATGGTAAGAAAGATTATCCGATGAGAACTCTTTCAGA
TACATTAAAGATTTCAGGAACAGCTATATCCAAGGCACTTGATGAGTTAGAAAATGATGTGCTTATTAAAAGATGTGAAG
ACCAGATGGAGATTACCGAAAAAGGTCTTGAGGCACTTGAGCCATACCGCGTAAAGAGAGCGGTTATTATGGCAGCAGGA
TTTGGTTCAAGAATGGTTCCTGTTACATTAGACAGACCAAAGCCAATGGTTGCTGTTAATGGAGTAAGAATTATTGATAC
ATTACTTGATGCACTTGTTTCTGTAGGAATTAAGGATATAACTCTTGTGAGGGGTTATAAGAAAGAAAAATTTGATGAGA
TTCTTGATAAATATCCATTTATCAATCTTATTGATAACGATATATATGATAAAACCAATAATATATCATCAGCAATGGCA
GCATTAGAACATATTGACCAGTGCTATTTATGTGAAGCAGACCTGTATATATCTAATCCGGCTATTATCACAAAGTATCA
GTACTGCAGCAATATCCTTGGCTCTTATTCATTAGAGACTGATGACTGGAGCTTTAAGCTTGATAATGGACATATAACAG
ATTACCAGAAGGGTAATACATATTGCTTTAATTATTATGGAATATCTTACTGGACAAAGGAAGACAGTGCAAGATTAAGA
GAAGACTTTGCACAGGTATATAATGAAGAGCCGGAGGGTAATGATTATTTCTGGGAATTCATTCCATTAGTACTTCGCAA
GGAAAGATATGCGGTAGAGGTAAGACCTTGTGAGAAATCAGATATTATGGAGATAGATAATTTTTATGAGCTGGTACAGT
TAGATTCTTCTTATAAGGATTATCCGGGACAGGAACAGTAA

Upstream 100 bases:

>100_bases
GATGGACAGACAGTACACCATATGGAAGGTATGCACAATTATTGTTACATGCATTGCACTTGGAATCTATATAATTCCAA
TGGTGCTGTAAGGAGGAAAT

Downstream 100 bases:

>100_bases
ATGCAGATATAAAGGGAAGGTGAATGTCTATGATATGTTATAAGGGAAAGGTTCTTACAGTTGACAGCAATGATACAGTA
GCCGGTTATCTCGTTGAGGA

Product: choline kinase / choline-phosphate cytidylyltransferase

Products: ADP; O-phosphocholine

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNRYQFEVLTYIEKNGKKDYPMRTLSDTLKISGTAISKALDELENDVLIKRCEDQMEITEKGLEALEPYRVKRAVIMAAG
FGSRMVPVTLDRPKPMVAVNGVRIIDTLLDALVSVGIKDITLVRGYKKEKFDEILDKYPFINLIDNDIYDKTNNISSAMA
ALEHIDQCYLCEADLYISNPAIITKYQYCSNILGSYSLETDDWSFKLDNGHITDYQKGNTYCFNYYGISYWTKEDSARLR
EDFAQVYNEEPEGNDYFWEFIPLVLRKERYAVEVRPCEKSDIMEIDNFYELVQLDSSYKDYPGQEQ

Sequences:

>Translated_306_residues
MNRYQFEVLTYIEKNGKKDYPMRTLSDTLKISGTAISKALDELENDVLIKRCEDQMEITEKGLEALEPYRVKRAVIMAAG
FGSRMVPVTLDRPKPMVAVNGVRIIDTLLDALVSVGIKDITLVRGYKKEKFDEILDKYPFINLIDNDIYDKTNNISSAMA
ALEHIDQCYLCEADLYISNPAIITKYQYCSNILGSYSLETDDWSFKLDNGHITDYQKGNTYCFNYYGISYWTKEDSARLR
EDFAQVYNEEPEGNDYFWEFIPLVLRKERYAVEVRPCEKSDIMEIDNFYELVQLDSSYKDYPGQEQ
>Mature_306_residues
MNRYQFEVLTYIEKNGKKDYPMRTLSDTLKISGTAISKALDELENDVLIKRCEDQMEITEKGLEALEPYRVKRAVIMAAG
FGSRMVPVTLDRPKPMVAVNGVRIIDTLLDALVSVGIKDITLVRGYKKEKFDEILDKYPFINLIDNDIYDKTNNISSAMA
ALEHIDQCYLCEADLYISNPAIITKYQYCSNILGSYSLETDDWSFKLDNGHITDYQKGNTYCFNYYGISYWTKEDSARLR
EDFAQVYNEEPEGNDYFWEFIPLVLRKERYAVEVRPCEKSDIMEIDNFYELVQLDSSYKDYPGQEQ

Specific function: Unknown

COG id: COG4750

COG function: function code M; CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017189
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: 2.7.1.32; 2.7.7.15

Molecular weight: Translated: 35551; Mature: 35551

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRYQFEVLTYIEKNGKKDYPMRTLSDTLKISGTAISKALDELENDVLIKRCEDQMEITE
CCCEEEHHHHHHHHCCCCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLEALEPYRVKRAVIMAAGFGSRMVPVTLDRPKPMVAVNGVRIIDTLLDALVSVGIKDI
HHHHHHCHHHHHHEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCHHE
TLVRGYKKEKFDEILDKYPFINLIDNDIYDKTNNISSAMAALEHIDQCYLCEADLYISNP
EECCCCCHHHHHHHHHHCCEEEECCCHHHCCCCCHHHHHHHHHHCCHHEEEECCEEECCC
AIITKYQYCSNILGSYSLETDDWSFKLDNGHITDYQKGNTYCFNYYGISYWTKEDSARLR
EEEEHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCEEEEEECCEEECCCHHHHHH
EDFAQVYNEEPEGNDYFWEFIPLVLRKERYAVEVRPCEKSDIMEIDNFYELVQLDSSYKD
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
YPGQEQ
CCCCCC
>Mature Secondary Structure
MNRYQFEVLTYIEKNGKKDYPMRTLSDTLKISGTAISKALDELENDVLIKRCEDQMEITE
CCCEEEHHHHHHHHCCCCCCCHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KGLEALEPYRVKRAVIMAAGFGSRMVPVTLDRPKPMVAVNGVRIIDTLLDALVSVGIKDI
HHHHHHCHHHHHHEEEEEECCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHCCCHHE
TLVRGYKKEKFDEILDKYPFINLIDNDIYDKTNNISSAMAALEHIDQCYLCEADLYISNP
EECCCCCHHHHHHHHHHCCEEEECCCHHHCCCCCHHHHHHHHHHCCHHEEEECCEEECCC
AIITKYQYCSNILGSYSLETDDWSFKLDNGHITDYQKGNTYCFNYYGISYWTKEDSARLR
EEEEHHHHHHHHHCCCCCCCCCEEEEECCCEECCCCCCCCEEEEEECCEEECCCHHHHHH
EDFAQVYNEEPEGNDYFWEFIPLVLRKERYAVEVRPCEKSDIMEIDNFYELVQLDSSYKD
HHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCC
YPGQEQ
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; choline

Specific reaction: ATP + choline = ADP + O-phosphocholine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]