| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is wcaA [C]
Identifier: 238916062
GI number: 238916062
Start: 103670
End: 106171
Strand: Direct
Name: wcaA [C]
Synonym: EUBELI_00095
Alternate gene names: 238916062
Gene position: 103670-106171 (Clockwise)
Preceding gene: 238916061
Following gene: 238916063
Centisome position: 4.83
GC content: 35.37
Gene sequence:
>2502_bases ATGAAAAAGAGTGATAATGTAATTAATATACAGCTTTCAGATAATCAGGGAAAACTTCATATTAGAATTGCAGGCTGGTA TATTCCTAAGGATTTTGATGATTATTCATTTGAATTATTTATTAATGGGGGAAAAATAGAGTGCAGTGTTGAACATATAA CAAGAGAGGATAAGCTAGATCTTCTTATAAGTAACAATCTAAAGCGAGACAGCAAGATAGGATTCATTATTAAAACAGAT GTTAATAAGAGCGATGTTAAGACTATTGAATTATATGTAGTTGATGCAGGGGTAAGAAGTAAGATTGCAAGTGCTGATGA GAAGGATGTTGTATATACGGTACAGGATCAGATATTACAGTATAATATAGACAGAATATGGCCGGAAAAGACTATCGATG ACAAGCATGTTTACAGGGTAGCAGGATGGGTTGTTGCACAGGAAGGTGATGTTGTAATCAATATGACAGATACAAGCAAT AATCCGCTTGAATTCAAGAATGTGCGCTGTGAACGTCTTGATTTAATTGATAATGGTTATACAGAAGATGAAAAAAAAGC GGTTGGATTCACAATTACAATAGATGAAAAACCTGGATATGTATTACATTTTAAGTCGGATGCCAAGAGCATTGATATTA ATATAGATGAAGAGATTAAGAGACAGAGAAGAATTTACAATATAGATAAGACCAAGAGAATGATTAAGGCTGTAACACCA CATAATGTCGCACGCCTCTGTCATCACATAAGATTATATGGATTTAAAGATCTTAAAGAGTATGTATATGGCGGATTATA TGGCGTTATGGATCAGGCTGAGATATATAAGAAGTGGTTTGCAATTCATAAAGCTACACAGGAAGAGCTGGATAATCAGA AAAAGGTGAAGTTTGCTTATGAACCAAAGGTAAGTATTATTGTTCCAACATATAATACACCTATTAAGTATCTCGAAGAG ATGATCCAGTCAGTAATTAACCAGTCATACAGTAACTGGCAGCTTTGTATAGCAGATGGAAGCTGCGGTAATGCAAAGCT TGAGAAGGTTCTTGAAGATTATCATAAGAAAGATTCAAGAATTGTATATAAGCTGTTAGACAGTAATAAGGGAATTGCAG GCAATACTAATGCTGCACTTGAACTGGCTGACGGTGAGATAACAGGGCTTCTTGATCATGATGACACATTAGAGCCAGAT GCTTTATATGAAGTTGTTAAAGCATTTCAGGATAAGATGGTTGATGCTGTATATACAGATGAAGATAAGATATTAGGACC GGATTGGATAAATGTTGATCCTAATTTTAAGACAGATTACAACATTGATTTGTTAAGATCTCATAACTATATAACACATT TCTTCTGTGTTAAGACAGAGCTTCTTAAGGAAATCGGTGGCTTTAAGGCTGATTATGATGGTGCACAGGATTATGATGTT ATATTAAGATGTACTGAGAAAGCCCGTAAGACTGAGCATATTGCCAAGATATTATATCATTGGAGAATGCATGATAATTC TACAGCAGCTAATCCAGCAAGTAAGGCATACTGCCATGAAGCAGGAAGAAAGGCTGTTGAGGACCATCTTAAGAGACTTG GAATACCGGCTAAGGTTGAACTTTGTAAGTTATTCGGAGGGAGCAGGGTTATATATGAGACACCAGGAAATCCGCTTGTT TCAATTGTAATTCCTAATAAGGATCATATTGATGATCTTGATAAATGTGTACGTTCACTGTTTAATGTCAATACTTATAA GAATATAGAAGTTATTATTGTTGAAAATAACAGTACGCAGAAAGAAACATTTGAATATTATGACAGTATACAGAAGGAAT ATTCTAATGTTAAGGTGTTGGTGTGGAAGAGAGAATTTAATTATTCTGCAATTAATAATTTCGGTGTTAAGGAAGCAAAA GGTGATTATATCTTACTGCTCAACAATGATACTGAAATGATTGCACCGGATTCTATATCAGACATGCTTGGTTACTGCAT GCGTCCGGATGTGGGAATTGTTGGTGCCAAGTTATTGTACCCGGATGGAACAATCCAGCATGCTGGTGTAATTATCGGAC TTGGCGGAATTGCAGGACATGCATTCATAGGTCTTGATGCTAACCAGTACGGATATATGTCAAGAGCATATCTTTCAAGC GATTATTCTGCGGTTACAGCTGCATGCCTTATGATATCAAAGGAAATATACAACGAAGTAGGAGGTTTGTGTGAACAATA TGCAGTTGCATTTAATGATGTTGATTTCTGCATGAAAGTCAGAAGCAAGGGATACCTTGTAGTATATGATGCATTTTCAC AGTGGTATCATTATGAATCTAAGTCAAGAGGATATGAAGATACTGAAGAAAAGCAATTAAGATTCAAAGGCGAGATTGAT ACATTTAAGAGCAAATGGCAGAAAGAATTAGATGAAGGAGATCCTTTCTATAACAGGAATTTCCCTCTTAACACAGAATC ATATACACTGGAATTAGAGTAA
Upstream 100 bases:
>100_bases AAAGAAGCAGCAAGGTTTAATGTTGTATCAGGAATTGAAGATATGGGTGTTGCAAGAATTGAGCATACATGGAAGAACTG TTAATTGAAAGGTAGTAGCT
Downstream 100 bases:
>100_bases TTATCAGAGGTAAAAATGTTTTTAACGAGAGCAGCACAGATTATTGGAAAAGAAGGCTTTAAGACATTCGGGTATGCATT ACAACAGAAGATGCATCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 833; Mature: 833
Protein sequence:
>833_residues MKKSDNVINIQLSDNQGKLHIRIAGWYIPKDFDDYSFELFINGGKIECSVEHITREDKLDLLISNNLKRDSKIGFIIKTD VNKSDVKTIELYVVDAGVRSKIASADEKDVVYTVQDQILQYNIDRIWPEKTIDDKHVYRVAGWVVAQEGDVVINMTDTSN NPLEFKNVRCERLDLIDNGYTEDEKKAVGFTITIDEKPGYVLHFKSDAKSIDINIDEEIKRQRRIYNIDKTKRMIKAVTP HNVARLCHHIRLYGFKDLKEYVYGGLYGVMDQAEIYKKWFAIHKATQEELDNQKKVKFAYEPKVSIIVPTYNTPIKYLEE MIQSVINQSYSNWQLCIADGSCGNAKLEKVLEDYHKKDSRIVYKLLDSNKGIAGNTNAALELADGEITGLLDHDDTLEPD ALYEVVKAFQDKMVDAVYTDEDKILGPDWINVDPNFKTDYNIDLLRSHNYITHFFCVKTELLKEIGGFKADYDGAQDYDV ILRCTEKARKTEHIAKILYHWRMHDNSTAANPASKAYCHEAGRKAVEDHLKRLGIPAKVELCKLFGGSRVIYETPGNPLV SIVIPNKDHIDDLDKCVRSLFNVNTYKNIEVIIVENNSTQKETFEYYDSIQKEYSNVKVLVWKREFNYSAINNFGVKEAK GDYILLLNNDTEMIAPDSISDMLGYCMRPDVGIVGAKLLYPDGTIQHAGVIIGLGGIAGHAFIGLDANQYGYMSRAYLSS DYSAVTAACLMISKEIYNEVGGLCEQYAVAFNDVDFCMKVRSKGYLVVYDAFSQWYHYESKSRGYEDTEEKQLRFKGEID TFKSKWQKELDEGDPFYNRNFPLNTESYTLELE
Sequences:
>Translated_833_residues MKKSDNVINIQLSDNQGKLHIRIAGWYIPKDFDDYSFELFINGGKIECSVEHITREDKLDLLISNNLKRDSKIGFIIKTD VNKSDVKTIELYVVDAGVRSKIASADEKDVVYTVQDQILQYNIDRIWPEKTIDDKHVYRVAGWVVAQEGDVVINMTDTSN NPLEFKNVRCERLDLIDNGYTEDEKKAVGFTITIDEKPGYVLHFKSDAKSIDINIDEEIKRQRRIYNIDKTKRMIKAVTP HNVARLCHHIRLYGFKDLKEYVYGGLYGVMDQAEIYKKWFAIHKATQEELDNQKKVKFAYEPKVSIIVPTYNTPIKYLEE MIQSVINQSYSNWQLCIADGSCGNAKLEKVLEDYHKKDSRIVYKLLDSNKGIAGNTNAALELADGEITGLLDHDDTLEPD ALYEVVKAFQDKMVDAVYTDEDKILGPDWINVDPNFKTDYNIDLLRSHNYITHFFCVKTELLKEIGGFKADYDGAQDYDV ILRCTEKARKTEHIAKILYHWRMHDNSTAANPASKAYCHEAGRKAVEDHLKRLGIPAKVELCKLFGGSRVIYETPGNPLV SIVIPNKDHIDDLDKCVRSLFNVNTYKNIEVIIVENNSTQKETFEYYDSIQKEYSNVKVLVWKREFNYSAINNFGVKEAK GDYILLLNNDTEMIAPDSISDMLGYCMRPDVGIVGAKLLYPDGTIQHAGVIIGLGGIAGHAFIGLDANQYGYMSRAYLSS DYSAVTAACLMISKEIYNEVGGLCEQYAVAFNDVDFCMKVRSKGYLVVYDAFSQWYHYESKSRGYEDTEEKQLRFKGEID TFKSKWQKELDEGDPFYNRNFPLNTESYTLELE >Mature_833_residues MKKSDNVINIQLSDNQGKLHIRIAGWYIPKDFDDYSFELFINGGKIECSVEHITREDKLDLLISNNLKRDSKIGFIIKTD VNKSDVKTIELYVVDAGVRSKIASADEKDVVYTVQDQILQYNIDRIWPEKTIDDKHVYRVAGWVVAQEGDVVINMTDTSN NPLEFKNVRCERLDLIDNGYTEDEKKAVGFTITIDEKPGYVLHFKSDAKSIDINIDEEIKRQRRIYNIDKTKRMIKAVTP HNVARLCHHIRLYGFKDLKEYVYGGLYGVMDQAEIYKKWFAIHKATQEELDNQKKVKFAYEPKVSIIVPTYNTPIKYLEE MIQSVINQSYSNWQLCIADGSCGNAKLEKVLEDYHKKDSRIVYKLLDSNKGIAGNTNAALELADGEITGLLDHDDTLEPD ALYEVVKAFQDKMVDAVYTDEDKILGPDWINVDPNFKTDYNIDLLRSHNYITHFFCVKTELLKEIGGFKADYDGAQDYDV ILRCTEKARKTEHIAKILYHWRMHDNSTAANPASKAYCHEAGRKAVEDHLKRLGIPAKVELCKLFGGSRVIYETPGNPLV SIVIPNKDHIDDLDKCVRSLFNVNTYKNIEVIIVENNSTQKETFEYYDSIQKEYSNVKVLVWKREFNYSAINNFGVKEAK GDYILLLNNDTEMIAPDSISDMLGYCMRPDVGIVGAKLLYPDGTIQHAGVIIGLGGIAGHAFIGLDANQYGYMSRAYLSS DYSAVTAACLMISKEIYNEVGGLCEQYAVAFNDVDFCMKVRSKGYLVVYDAFSQWYHYESKSRGYEDTEEKQLRFKGEID TFKSKWQKELDEGDPFYNRNFPLNTESYTLELE
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 95431; Mature: 95431
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSDNVINIQLSDNQGKLHIRIAGWYIPKDFDDYSFELFINGGKIECSVEHITREDKLD CCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEHHCCCCCCEE LLISNNLKRDSKIGFIIKTDVNKSDVKTIELYVVDAGVRSKIASADEKDVVYTVQDQILQ EEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHCCCCCCCEEEEEEHHHHH YNIDRIWPEKTIDDKHVYRVAGWVVAQEGDVVINMTDTSNNPLEFKNVRCERLDLIDNGY HHHHHCCCCCCCCCHHEEEEEEEEEEECCCEEEEEECCCCCCEEECCCCEEEEECCCCCC TEDEKKAVGFTITIDEKPGYVLHFKSDAKSIDINIDEEIKRQRRIYNIDKTKRMIKAVTP CCCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHCCC HNVARLCHHIRLYGFKDLKEYVYGGLYGVMDQAEIYKKWFAIHKATQEELDNQKKVKFAY HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EPKVSIIVPTYNTPIKYLEEMIQSVINQSYSNWQLCIADGSCGNAKLEKVLEDYHKKDSR CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE IVYKLLDSNKGIAGNTNAALELADGEITGLLDHDDTLEPDALYEVVKAFQDKMVDAVYTD EEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECC EDKILGPDWINVDPNFKTDYNIDLLRSHNYITHFFCVKTELLKEIGGFKADYDGAQDYDV CCCEECCCEEECCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHH ILRCTEKARKTEHIAKILYHWRMHDNSTAANPASKAYCHEAGRKAVEDHLKRLGIPAKVE HHEEHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LCKLFGGSRVIYETPGNPLVSIVIPNKDHIDDLDKCVRSLFNVNTYKNIEVIIVENNSTQ HHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH KETFEYYDSIQKEYSNVKVLVWKREFNYSAINNFGVKEAKGDYILLLNNDTEMIAPDSIS HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHCCCCCCCCCCCEEEEECCCCCEECCCCHH DMLGYCMRPDVGIVGAKLLYPDGTIQHAGVIIGLGGIAGHAFIGLDANQYGYMSRAYLSS HHHHHHCCCCCCEEEEEEECCCCCEEECCEEEEECCCCCCEEEEECCCCCCCHHHHHHCC DYSAVTAACLMISKEIYNEVGGLCEQYAVAFNDVDFCMKVRSKGYLVVYDAFSQWYHYES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECHHHHHCCCC KSRGYEDTEEKQLRFKGEIDTFKSKWQKELDEGDPFYNRNFPLNTESYTLELE CCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MKKSDNVINIQLSDNQGKLHIRIAGWYIPKDFDDYSFELFINGGKIECSVEHITREDKLD CCCCCCEEEEEEECCCCEEEEEEEEEECCCCCCCCEEEEEEECCEEEEEEHHCCCCCCEE LLISNNLKRDSKIGFIIKTDVNKSDVKTIELYVVDAGVRSKIASADEKDVVYTVQDQILQ EEEECCCCCCCCEEEEEEECCCCCCCEEEEEEEECCCHHHHHCCCCCCCEEEEEEHHHHH YNIDRIWPEKTIDDKHVYRVAGWVVAQEGDVVINMTDTSNNPLEFKNVRCERLDLIDNGY HHHHHCCCCCCCCCHHEEEEEEEEEEECCCEEEEEECCCCCCEEECCCCEEEEECCCCCC TEDEKKAVGFTITIDEKPGYVLHFKSDAKSIDINIDEEIKRQRRIYNIDKTKRMIKAVTP CCCCCCEEEEEEEEECCCCEEEEEECCCCEEEECCCHHHHHHHHHCCCHHHHHHHHHCCC HNVARLCHHIRLYGFKDLKEYVYGGLYGVMDQAEIYKKWFAIHKATQEELDNQKKVKFAY HHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE EPKVSIIVPTYNTPIKYLEEMIQSVINQSYSNWQLCIADGSCGNAKLEKVLEDYHKKDSR CCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCE IVYKLLDSNKGIAGNTNAALELADGEITGLLDHDDTLEPDALYEVVKAFQDKMVDAVYTD EEEEEECCCCCCCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEECC EDKILGPDWINVDPNFKTDYNIDLLRSHNYITHFFCVKTELLKEIGGFKADYDGAQDYDV CCCEECCCEEECCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCCCHHH ILRCTEKARKTEHIAKILYHWRMHDNSTAANPASKAYCHEAGRKAVEDHLKRLGIPAKVE HHEEHHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH LCKLFGGSRVIYETPGNPLVSIVIPNKDHIDDLDKCVRSLFNVNTYKNIEVIIVENNSTQ HHHHCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCH KETFEYYDSIQKEYSNVKVLVWKREFNYSAINNFGVKEAKGDYILLLNNDTEMIAPDSIS HHHHHHHHHHHHHHCCEEEEEEEECCCCHHHCCCCCCCCCCCEEEEECCCCCEECCCCHH DMLGYCMRPDVGIVGAKLLYPDGTIQHAGVIIGLGGIAGHAFIGLDANQYGYMSRAYLSS HHHHHHCCCCCCEEEEEEECCCCCEEECCEEEEECCCCCCEEEEECCCCCCCHHHHHHCC DYSAVTAACLMISKEIYNEVGGLCEQYAVAFNDVDFCMKVRSKGYLVVYDAFSQWYHYES CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEEEECHHHHHCCCC KSRGYEDTEEKQLRFKGEIDTFKSKWQKELDEGDPFYNRNFPLNTESYTLELE CCCCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]