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The map label for this gene is yebA [C]

Identifier: 238916035

GI number: 238916035

Start: 72032

End: 73534

Strand: Direct

Name: yebA [C]

Synonym: EUBELI_00068

Alternate gene names: 238916035

Gene position: 72032-73534 (Clockwise)

Preceding gene: 238916034

Following gene: 238916036

Centisome position: 3.36

GC content: 38.39

Gene sequence:

>1503_bases
ATGAAGCTCACAATGATTAACACAATGACAGTTGCGAGCCTTGTCTGTATTATAGCAATTCCATTTTTGACTAAAAATTT
ATTAAAAACGGAAGCTGATTATTATAGTATAACAATTAATGGCATGAAGGTTGGTGCAGCCAACACTGAAGAAGAGGTTA
TTATTGCTCTTGCTTCAGCAAGACAGGAATTAAGTGCACAGTATAGTGATGTTGTGTATATGGATCCTGACATTGAGATT
AATAAAGAAAGCAGGAATGTTGCACAAAGAATGAGTGTGAATCAGTTGTCAGGCGCTATTTACAGTTATATGTTCGATAA
TGTTATGGATGTTGATTTCCATATGTATTATACAGTAAGACTTGGAGATTTCGTTGTTACATTGGAGTCTAAGGAAGATG
TAATAAAGTTATTTGAGAAGCTGATACAGAAGTATGATCCGAACAATGCATTTACAGTGTCTCTTGATACACTTGATGCT
GCTACAGGAACTTATACTGTTTCAGTTAATGAGAAGGCTAAAGAAAGTACAGCAGCAGAGATTGTTTCATCAGCTATCAG
TGGTACAGCGGTATCACAGGATGGGCAGACTGTTGCTGACGGAGACGGGCTTACAGGTATTGGTTTCAGTAATGATGTGG
TTGTTGTTGAAGTACCGGCAGATAATGCTGTAACAACTTCAGTTACAGATGCCTATGAAAATATAACTAAGGAGCATGCT
GAAAAGACAGTATATACTGTTCAGGCAGGAGATGTTTTATCAGTTATTGCCCAGAATAACGGACTTACAATATCAGAGTT
ATTAAGTCTTAATTCTAATCTGACAGAGAATAGTGTTATTGCACCAGGAGACTCAATAATTATTACTGTTCCAAAGTCAG
AGATATCAGTTATAACAACTTATCAGATGAGTTATGAGGAGGATTACGAAGCAGAGCCTAATTATGAGGATGATAATACT
AATTACAGAGGAACCAATACTGTTATATCTGAAGGCACTGTAGGACACAGAGCAGTAATAGCAGAGGTTACTTATACTAA
TGGTAATGAGACTGGAAGAACATATGTAAAGGAAGATATTATTAAGGAATCTGTTCCTAAGACTATTGCGGTTGGAACAC
TTACCCCTCCAACATATTTAAAGCCGGTAGCTGGAGGTTCGTTCTCGTCAGGATATGGCTACAGATGGGGAAGTCTTCAT
AAAGGTGTTGACTGGTCTGTAACACAGGGAACAACAGTTACAGCAGCAGCAGCAGGAACTGTAACAAGAGCAGGATGGTT
TGCTGATTATGGATATTGCGTAGATATAACGCACAGTAACGGAACAATGACAAGATATGGTCATCTTAGTTCTATAAATG
TAAGCGTTGGACAGAGCGTATCACAGGGACAGGCTATTGCCGCATCAGGTAATACAGGCTACAGTACAGGCCCGCATCTT
CATTTTGAAATATGGGTTGGAGGTTCTCCTGTTAATCCGCTTAACTATGTTAATAAGTACTAG

Upstream 100 bases:

>100_bases
TTGTTACGAAATTGTTACAAATATATTACAAGAAGATAACTATATATTAACATAGTATTTGGAGGAACTCATGGAACGCT
TGTCAAGATATGGCAGACGA

Downstream 100 bases:

>100_bases
AGTGATAAAATTACCGGATATTTTTATAAGGCTGCCCTGATAAAGGACAGCCTTTGTTATGTGACAAATTGCAATTTTTT
GCATATAATTATAACAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MKLTMINTMTVASLVCIIAIPFLTKNLLKTEADYYSITINGMKVGAANTEEEVIIALASARQELSAQYSDVVYMDPDIEI
NKESRNVAQRMSVNQLSGAIYSYMFDNVMDVDFHMYYTVRLGDFVVTLESKEDVIKLFEKLIQKYDPNNAFTVSLDTLDA
ATGTYTVSVNEKAKESTAAEIVSSAISGTAVSQDGQTVADGDGLTGIGFSNDVVVVEVPADNAVTTSVTDAYENITKEHA
EKTVYTVQAGDVLSVIAQNNGLTISELLSLNSNLTENSVIAPGDSIIITVPKSEISVITTYQMSYEEDYEAEPNYEDDNT
NYRGTNTVISEGTVGHRAVIAEVTYTNGNETGRTYVKEDIIKESVPKTIAVGTLTPPTYLKPVAGGSFSSGYGYRWGSLH
KGVDWSVTQGTTVTAAAAGTVTRAGWFADYGYCVDITHSNGTMTRYGHLSSINVSVGQSVSQGQAIAASGNTGYSTGPHL
HFEIWVGGSPVNPLNYVNKY

Sequences:

>Translated_500_residues
MKLTMINTMTVASLVCIIAIPFLTKNLLKTEADYYSITINGMKVGAANTEEEVIIALASARQELSAQYSDVVYMDPDIEI
NKESRNVAQRMSVNQLSGAIYSYMFDNVMDVDFHMYYTVRLGDFVVTLESKEDVIKLFEKLIQKYDPNNAFTVSLDTLDA
ATGTYTVSVNEKAKESTAAEIVSSAISGTAVSQDGQTVADGDGLTGIGFSNDVVVVEVPADNAVTTSVTDAYENITKEHA
EKTVYTVQAGDVLSVIAQNNGLTISELLSLNSNLTENSVIAPGDSIIITVPKSEISVITTYQMSYEEDYEAEPNYEDDNT
NYRGTNTVISEGTVGHRAVIAEVTYTNGNETGRTYVKEDIIKESVPKTIAVGTLTPPTYLKPVAGGSFSSGYGYRWGSLH
KGVDWSVTQGTTVTAAAAGTVTRAGWFADYGYCVDITHSNGTMTRYGHLSSINVSVGQSVSQGQAIAASGNTGYSTGPHL
HFEIWVGGSPVNPLNYVNKY
>Mature_500_residues
MKLTMINTMTVASLVCIIAIPFLTKNLLKTEADYYSITINGMKVGAANTEEEVIIALASARQELSAQYSDVVYMDPDIEI
NKESRNVAQRMSVNQLSGAIYSYMFDNVMDVDFHMYYTVRLGDFVVTLESKEDVIKLFEKLIQKYDPNNAFTVSLDTLDA
ATGTYTVSVNEKAKESTAAEIVSSAISGTAVSQDGQTVADGDGLTGIGFSNDVVVVEVPADNAVTTSVTDAYENITKEHA
EKTVYTVQAGDVLSVIAQNNGLTISELLSLNSNLTENSVIAPGDSIIITVPKSEISVITTYQMSYEEDYEAEPNYEDDNT
NYRGTNTVISEGTVGHRAVIAEVTYTNGNETGRTYVKEDIIKESVPKTIAVGTLTPPTYLKPVAGGSFSSGYGYRWGSLH
KGVDWSVTQGTTVTAAAAGTVTRAGWFADYGYCVDITHSNGTMTRYGHLSSINVSVGQSVSQGQAIAASGNTGYSTGPHL
HFEIWVGGSPVNPLNYVNKY

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=95, Percent_Identity=49.4736842105263, Blast_Score=97, Evalue=3e-21,
Organism=Escherichia coli, GI87082297, Length=124, Percent_Identity=37.9032258064516, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 53861; Mature: 53861

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTMINTMTVASLVCIIAIPFLTKNLLKTEADYYSITINGMKVGAANTEEEVIIALASA
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEEHHH
RQELSAQYSDVVYMDPDIEINKESRNVAQRMSVNQLSGAIYSYMFDNVMDVDFHMYYTVR
HHHHHHHHCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEE
LGDFVVTLESKEDVIKLFEKLIQKYDPNNAFTVSLDTLDAATGTYTVSVNEKAKESTAAE
ECEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHH
IVSSAISGTAVSQDGQTVADGDGLTGIGFSNDVVVVEVPADNAVTTSVTDAYENITKEHA
HHHHHHCCCEECCCCCEEECCCCEEECCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH
EKTVYTVQAGDVLSVIAQNNGLTISELLSLNSNLTENSVIAPGDSIIITVPKSEISVITT
CCEEEEEECCCEEEEEECCCCCCHHHHHHCCCCCCCCCEECCCCEEEEEECCCCEEEEEE
YQMSYEEDYEAEPNYEDDNTNYRGTNTVISEGTVGHRAVIAEVTYTNGNETGRTYVKEDI
EEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHH
IKESVPKTIAVGTLTPPTYLKPVAGGSFSSGYGYRWGSLHKGVDWSVTQGTTVTAAAAGT
HHHHCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC
VTRAGWFADYGYCVDITHSNGTMTRYGHLSSINVSVGQSVSQGQAIAASGNTGYSTGPHL
CCCCCEEECCCEEEEEEECCCCEEEECCEEEEEEHHCCCCCCCCEEEECCCCCCCCCCEE
HFEIWVGGSPVNPLNYVNKY
EEEEEECCCCCCHHHHHCCC
>Mature Secondary Structure
MKLTMINTMTVASLVCIIAIPFLTKNLLKTEADYYSITINGMKVGAANTEEEVIIALASA
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCCEEEEEEHHH
RQELSAQYSDVVYMDPDIEINKESRNVAQRMSVNQLSGAIYSYMFDNVMDVDFHMYYTVR
HHHHHHHHCCEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEE
LGDFVVTLESKEDVIKLFEKLIQKYDPNNAFTVSLDTLDAATGTYTVSVNEKAKESTAAE
ECEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHH
IVSSAISGTAVSQDGQTVADGDGLTGIGFSNDVVVVEVPADNAVTTSVTDAYENITKEHA
HHHHHHCCCEECCCCCEEECCCCEEECCCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHH
EKTVYTVQAGDVLSVIAQNNGLTISELLSLNSNLTENSVIAPGDSIIITVPKSEISVITT
CCEEEEEECCCEEEEEECCCCCCHHHHHHCCCCCCCCCEECCCCEEEEEECCCCEEEEEE
YQMSYEEDYEAEPNYEDDNTNYRGTNTVISEGTVGHRAVIAEVTYTNGNETGRTYVKEDI
EEECCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCHHHHHHH
IKESVPKTIAVGTLTPPTYLKPVAGGSFSSGYGYRWGSLHKGVDWSVTQGTTVTAAAAGT
HHHHCCCEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCEEEEECCCC
VTRAGWFADYGYCVDITHSNGTMTRYGHLSSINVSVGQSVSQGQAIAASGNTGYSTGPHL
CCCCCEEECCCEEEEEEECCCCEEEECCEEEEEEHHCCCCCCCCEEEECCCCCCCCCCEE
HFEIWVGGSPVNPLNYVNKY
EEEEEECCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]