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The map label for this gene is 238916017

Identifier: 238916017

GI number: 238916017

Start: 56296

End: 56841

Strand: Reverse

Name: 238916017

Synonym: EUBELI_00050

Alternate gene names: NA

Gene position: 56841-56296 (Counterclockwise)

Preceding gene: 238916018

Following gene: 238916016

Centisome position: 2.65

GC content: 45.97

Gene sequence:

>546_bases
ATGAAGTATGTATGTACAGTTTGTGGTTATGTTTATGAAGGAGAATCTCTTCCAGCAGATTTCGTCTGTCCAGTATGTAA
GGCACCAGCAAGCAAGTTCGCTGCACAGACAGGAGAAAGAGAATGGGCTGCTGAGCACGTTGTTGGCGTAGCTAAGGGCG
TAAGCGAGGATATCGTTGCTGATTTAAGAGCTAACTTTGAAGGTGAATGTTCAGAGGTTGGTATGTACCTTGCTATGGCA
AGAGTTGCTCACAGAGAGGGTTATCCAGAAATCGGTCTTTACTATGAGAAGGCTGCCTGGGAAGAAGCTGAGCATGCTTC
CAAGTTCGCTGAACTCCTCGGCGAAGTTGTAACAGACAGCACTAAGAAGAATCTTGAGATGAGAGTTGAAGCTGAGAACG
GCGCAACAGCAGGTAAGACTGACCTTGCTAAGAGAGCTAAGGCTGCTAACCTTGACGCAATCCATGATACAGTTCATGAG
ATGGCTAGAGATGAGGCTAGACATGGTAAGGCATTCGAGGGACTTCTTAAGAGATACTTTGGTTAA

Upstream 100 bases:

>100_bases
TATATTCTAGTTACGAACTGATGAAACATTTTCAGAAGTTCCGATAAGTAGAGTTCAGGCTCATGCCTGTTATGTTTATA
AACGAAAGGAGATTATTATT

Downstream 100 bases:

>100_bases
TTGTAAAACCAATAGAATCGGATAATATAAGGATTTTTAGAGGAATAAGTTTTTGGACTTATTCCTCTTTTTAATTTCTC
CTTTTCCTTGAATTCGACAA

Product: ferredoxin hydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKYVCTVCGYVYEGESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDIVADLRANFEGECSEVGMYLAMA
RVAHREGYPEIGLYYEKAAWEEAEHASKFAELLGEVVTDSTKKNLEMRVEAENGATAGKTDLAKRAKAANLDAIHDTVHE
MARDEARHGKAFEGLLKRYFG

Sequences:

>Translated_181_residues
MKYVCTVCGYVYEGESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDIVADLRANFEGECSEVGMYLAMA
RVAHREGYPEIGLYYEKAAWEEAEHASKFAELLGEVVTDSTKKNLEMRVEAENGATAGKTDLAKRAKAANLDAIHDTVHE
MARDEARHGKAFEGLLKRYFG
>Mature_181_residues
MKYVCTVCGYVYEGESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDIVADLRANFEGECSEVGMYLAMA
RVAHREGYPEIGLYYEKAAWEEAEHASKFAELLGEVVTDSTKKNLEMRVEAENGATAGKTDLAKRAKAANLDAIHDTVHE
MARDEARHGKAFEGLLKRYFG

Specific function: Unknown

COG id: COG1592

COG function: function code C; Rubrerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR003251 [H]

Pfam domain/function: PF02915 Rubrerythrin [H]

EC number: NA

Molecular weight: Translated: 19826; Mature: 19826

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS50903 RUBREDOXIN_LIKE ; PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYVCTVCGYVYEGESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDIVA
CCHHHHHHHHHHCCCCCCHHHHCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
DLRANFEGECSEVGMYLAMARVAHREGYPEIGLYYEKAAWEEAEHASKFAELLGEVVTDS
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKKNLEMRVEAENGATAGKTDLAKRAKAANLDAIHDTVHEMARDEARHGKAFEGLLKRYF
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
G
C
>Mature Secondary Structure
MKYVCTVCGYVYEGESLPADFVCPVCKAPASKFAAQTGEREWAAEHVVGVAKGVSEDIVA
CCHHHHHHHHHHCCCCCCHHHHCHHHCCCHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
DLRANFEGECSEVGMYLAMARVAHREGYPEIGLYYEKAAWEEAEHASKFAELLGEVVTDS
HHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TKKNLEMRVEAENGATAGKTDLAKRAKAANLDAIHDTVHEMARDEARHGKAFEGLLKRYF
CCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]