Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 238915996

GI number: 238915996

Start: 27550

End: 28428

Strand: Direct

Name: rsmI [H]

Synonym: EUBELI_00029

Alternate gene names: 238915996

Gene position: 27550-28428 (Clockwise)

Preceding gene: 238915995

Following gene: 238915998

Centisome position: 1.28

GC content: 42.09

Gene sequence:

>879_bases
ATGGATAATGAAAAAAATGTAAAGAAAGACGGACCGGGTATGCTGTATCTGTGTGCAACGCCTATTGGTAATCTTGAGGA
TATTACTTACAGGGTTCTGCGTGTGCTTTCAGAAGCAGACCTGATTGCAGCAGAGGATACAAGAAACAGTATTAAGCTGC
TTAATCATTTTGAAATAAAGACACCTATGACAAGCTATCATGAATTTAATAAGTATGATAAGGCAAAGGTTCTTGTTGAT
AAAATATTAGGTGGAATGGATGTGGCTGTAATTACTGATGCAGGAACTCCAGGAATATCAGATCCTGGTGAGGAGCTTGT
AAAGCAATGCAGGGCAGCAGGTATCAGGGTTACTTCACTTCCGGGACCGGCTGCATGTATAACTGCACTCACAATGTCAG
GACGCGAGACAAGAAGATTCGCATTTGAAGCATTTTTACCAGCGGATAAGAATGAGAGAAAAGAAGTTCTTGCAGAGTTA
GCATGTGAAACAAGGACTATGATTATATATGAAGCACCGCATAGACTTACTAAGACACTTGCAGAACTGCAAGATACGCT
TGGGGGCGACAGATTGATTACTATATGTAAGGAGCTTACCAAGAGATATGAGAATTCTATGGAATTCACGCTTGAATCTG
CATGTGAATATTATGAAAATAATGAGCCGAGAGGCGAATATGTGCTTGTGATTGCCGGAAAGAGCCGTGAGCAGTTAAAG
GCCGAGGCAAGAAAGCAGTGGGAAAACATGAGTGTGGCAGAACATGTGCAGATGTATATGTCGCAGGGTATGGACAAGAA
AGAAGCCATGAAAGCTGCGGCAAAGGACAGAGGTGTGTCAAAGAGGGATATATATCAGGAGCTTGAAGGGAAAGCGTAA

Upstream 100 bases:

>100_bases
AATTCCCAGCTTATAGTTGAAGAACCGCTTATTGTATACAAGACGGACGGTACTTACACTGATGCGCTTCTAAAAATGTA
TGAATAGATAGAGGTTTATT

Downstream 100 bases:

>100_bases
GCAGCTACTGGATAGTGTGCTCTCTTATGATTGCGCGTACTGTCTTGAAGAGGTAAGGTTTGATAGTATCTATGTCAGCA
GGTTCTTTATAAAGAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDNEKNVKKDGPGMLYLCATPIGNLEDITYRVLRVLSEADLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKYDKAKVLVD
KILGGMDVAVITDAGTPGISDPGEELVKQCRAAGIRVTSLPGPAACITALTMSGRETRRFAFEAFLPADKNERKEVLAEL
ACETRTMIIYEAPHRLTKTLAELQDTLGGDRLITICKELTKRYENSMEFTLESACEYYENNEPRGEYVLVIAGKSREQLK
AEARKQWENMSVAEHVQMYMSQGMDKKEAMKAAAKDRGVSKRDIYQELEGKA

Sequences:

>Translated_292_residues
MDNEKNVKKDGPGMLYLCATPIGNLEDITYRVLRVLSEADLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKYDKAKVLVD
KILGGMDVAVITDAGTPGISDPGEELVKQCRAAGIRVTSLPGPAACITALTMSGRETRRFAFEAFLPADKNERKEVLAEL
ACETRTMIIYEAPHRLTKTLAELQDTLGGDRLITICKELTKRYENSMEFTLESACEYYENNEPRGEYVLVIAGKSREQLK
AEARKQWENMSVAEHVQMYMSQGMDKKEAMKAAAKDRGVSKRDIYQELEGKA
>Mature_292_residues
MDNEKNVKKDGPGMLYLCATPIGNLEDITYRVLRVLSEADLIAAEDTRNSIKLLNHFEIKTPMTSYHEFNKYDKAKVLVD
KILGGMDVAVITDAGTPGISDPGEELVKQCRAAGIRVTSLPGPAACITALTMSGRETRRFAFEAFLPADKNERKEVLAEL
ACETRTMIIYEAPHRLTKTLAELQDTLGGDRLITICKELTKRYENSMEFTLESACEYYENNEPRGEYVLVIAGKSREQLK
AEARKQWENMSVAEHVQMYMSQGMDKKEAMKAAAKDRGVSKRDIYQELEGKA

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=235, Percent_Identity=44.2553191489362, Blast_Score=199, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 32773; Mature: 32773

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNEKNVKKDGPGMLYLCATPIGNLEDITYRVLRVLSEADLIAAEDTRNSIKLLNHFEIK
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCC
TPMTSYHEFNKYDKAKVLVDKILGGMDVAVITDAGTPGISDPGEELVKQCRAAGIRVTSL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECC
PGPAACITALTMSGRETRRFAFEAFLPADKNERKEVLAELACETRTMIIYEAPHRLTKTL
CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHH
AELQDTLGGDRLITICKELTKRYENSMEFTLESACEYYENNEPRGEYVLVIAGKSREQLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
AEARKQWENMSVAEHVQMYMSQGMDKKEAMKAAAKDRGVSKRDIYQELEGKA
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MDNEKNVKKDGPGMLYLCATPIGNLEDITYRVLRVLSEADLIAAEDTRNSIKLLNHFEIK
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHCCC
TPMTSYHEFNKYDKAKVLVDKILGGMDVAVITDAGTPGISDPGEELVKQCRAAGIRVTSL
CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHCCEEEECC
PGPAACITALTMSGRETRRFAFEAFLPADKNERKEVLAELACETRTMIIYEAPHRLTKTL
CCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEEEECCHHHHHHH
AELQDTLGGDRLITICKELTKRYENSMEFTLESACEYYENNEPRGEYVLVIAGKSREQLK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHH
AEARKQWENMSVAEHVQMYMSQGMDKKEAMKAAAKDRGVSKRDIYQELEGKA
HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]