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The map label for this gene is xynC [H]

Identifier: 238915983

GI number: 238915983

Start: 8863

End: 9645

Strand: Direct

Name: xynC [H]

Synonym: EUBELI_00007

Alternate gene names: 238915983

Gene position: 8863-9645 (Clockwise)

Preceding gene: 238915982

Following gene: 238915984

Centisome position: 0.41

GC content: 32.57

Gene sequence:

>783_bases
ATGGCTTTAATTAATATTAATTATGAATCAAAAAAACTTGGGATGCCCGTTATGATTAATGCAATTATTCCTCAGGGAAG
AGGAAATTATAAAACATTATATCTTCTTCATGGAATGGGAGGAGATTATACAACATGGATTACAAAATCCAGAGTGGCAG
ATTATGTAGATAATACAGATATAGCAGTCATAATGATTTCAGGTGATAACAAATGTTTTGTAGATAATGTTCATGGAAGA
AAATATTTTACATTTTTAACAGAAGAACTTATAGAAACCTGTACTAACTGGTTTGGATTATCATGTGACAGAAAAGACCG
TTACATAGCAGGAATGTCAATGGGCGGATATGGGGCTGTACATGCTGCACTTATTAAACCTGATGTGTATGGAAAGGTGT
TCTCATATTCAGGACTGCTTGATATAGAGAAAAGATTTGACAACCCACAGGGAATAAATACATATCAGATATTTGGAGAC
AGAGAAAAATTATCAGATAACCAATTTGATATAATGAACTGTCTAAAAGAGGATAATTTCAAGACAAATGTGGAAAATTA
TCCGGAATTTTACATAAGATGTGGATTATCTGATCAGATTCTTACAATGAGCAGACAGTGGAATAAATATGCATCAGATG
CAGGACTTAAAGTGAATTATTATGAAACTGCCGGCAGTCATGATTTTATTTTCTGGGATAAATGCATACATGAGACAGTT
AATATAATAAAAGACCAGTCGTACAGAATGGAGGATATATATGGCAACAGTAATGAATGTTAA

Upstream 100 bases:

>100_bases
TTTGAAGAAGACACAGATAAAACAGTAGAATCTGAAGATTAATCTTAAGGAAACTGCCACATTTATATATGTGACGGTTT
CCTTTTTAGCAGGAGATAAT

Downstream 100 bases:

>100_bases
TCACTTTTCTATATATCTTAAGCGTAATATGGAATGCACAGTTATTCTGCCATCACATATAAAAAATGATGAGAAGCTTC
CAGTATTATGGTTATATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Acetylxylosidase [H]

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MALININYESKKLGMPVMINAIIPQGRGNYKTLYLLHGMGGDYTTWITKSRVADYVDNTDIAVIMISGDNKCFVDNVHGR
KYFTFLTEELIETCTNWFGLSCDRKDRYIAGMSMGGYGAVHAALIKPDVYGKVFSYSGLLDIEKRFDNPQGINTYQIFGD
REKLSDNQFDIMNCLKEDNFKTNVENYPEFYIRCGLSDQILTMSRQWNKYASDAGLKVNYYETAGSHDFIFWDKCIHETV
NIIKDQSYRMEDIYGNSNEC

Sequences:

>Translated_260_residues
MALININYESKKLGMPVMINAIIPQGRGNYKTLYLLHGMGGDYTTWITKSRVADYVDNTDIAVIMISGDNKCFVDNVHGR
KYFTFLTEELIETCTNWFGLSCDRKDRYIAGMSMGGYGAVHAALIKPDVYGKVFSYSGLLDIEKRFDNPQGINTYQIFGD
REKLSDNQFDIMNCLKEDNFKTNVENYPEFYIRCGLSDQILTMSRQWNKYASDAGLKVNYYETAGSHDFIFWDKCIHETV
NIIKDQSYRMEDIYGNSNEC
>Mature_259_residues
ALININYESKKLGMPVMINAIIPQGRGNYKTLYLLHGMGGDYTTWITKSRVADYVDNTDIAVIMISGDNKCFVDNVHGRK
YFTFLTEELIETCTNWFGLSCDRKDRYIAGMSMGGYGAVHAALIKPDVYGKVFSYSGLLDIEKRFDNPQGINTYQIFGDR
EKLSDNQFDIMNCLKEDNFKTNVENYPEFYIRCGLSDQILTMSRQWNKYASDAGLKVNYYETAGSHDFIFWDKCIHETVN
IIKDQSYRMEDIYGNSNEC

Specific function: Unknown

COG id: COG0627

COG function: function code R; Predicted esterase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000801 [H]

Pfam domain/function: PF00756 Esterase [H]

EC number: NA

Molecular weight: Translated: 29904; Mature: 29773

Theoretical pI: Translated: 5.15; Mature: 5.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALININYESKKLGMPVMINAIIPQGRGNYKTLYLLHGMGGDYTTWITKSRVADYVDNTD
CEEEEECCCHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHCCCCC
IAVIMISGDNKCFVDNVHGRKYFTFLTEELIETCTNWFGLSCDRKDRYIAGMSMGGYGAV
EEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCE
HAALIKPDVYGKVFSYSGLLDIEKRFDNPQGINTYQIFGDREKLSDNQFDIMNCLKEDNF
EEEEECCCCCCCEEECCCEEEHHHHCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHCCCC
KTNVENYPEFYIRCGLSDQILTMSRQWNKYASDAGLKVNYYETAGSHDFIFWDKCIHETV
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHH
NIIKDQSYRMEDIYGNSNEC
HHHCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
ALININYESKKLGMPVMINAIIPQGRGNYKTLYLLHGMGGDYTTWITKSRVADYVDNTD
EEEEECCCHHHCCCCEEEEEEECCCCCCEEEEEEEECCCCCEEEEEEHHHHHHHCCCCC
IAVIMISGDNKCFVDNVHGRKYFTFLTEELIETCTNWFGLSCDRKDRYIAGMSMGGYGAV
EEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCE
HAALIKPDVYGKVFSYSGLLDIEKRFDNPQGINTYQIFGDREKLSDNQFDIMNCLKEDNF
EEEEECCCCCCCEEECCCEEEHHHHCCCCCCCEEEEEECCHHHCCCCHHHHHHHHHCCCC
KTNVENYPEFYIRCGLSDQILTMSRQWNKYASDAGLKVNYYETAGSHDFIFWDKCIHETV
CCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEHHHHHHHHH
NIIKDQSYRMEDIYGNSNEC
HHHCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2111111 [H]