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The map label for this gene is nlpA [H]

Identifier: 238897134

GI number: 238897134

Start: 5132694

End: 5133596

Strand: Reverse

Name: nlpA [H]

Synonym: KP1_5394

Alternate gene names: 238897134

Gene position: 5133596-5132694 (Counterclockwise)

Preceding gene: 238897135

Following gene: 238897133

Centisome position: 97.81

GC content: 57.25

Gene sequence:

>903_bases
TTGCGTGGTTTGCTGTTTATTACCCGACCCGAAAGTCGCTATAGTTTTGCACGAAAAAAAACAATGACATTCAGGACAGA
CAGGGTGAAGAGGATGAGATTACGTTTACGGGCCGCCGCCGCGGTAATGCTGGCGGGTCTGGCGCTGGTCGGCTGCGACC
AAAAGGGTAATGAAGCGAAGCACATTAAGGTCGGCGTGATTAACGGCGCCGAGCAGGATGTGGCGGAAGTGGCGAAGAAG
GTGGCCAAAGAGAAGTACGGTCTGGAGGTCGAGCTGGTGGGGTTCAGCGGCTCGCTGCTGCCTAACGAATCGACCAACGC
CGGCGATCTGGACGCCAACGTCTTCCAGCATCGGCCTTTCCTTGAGCAGGACAACAAAGCGCATAACTATCATCTGGTGG
CGGTCGGGAATACCTTCGTCTTCCCGATGGCCGGCTATTCGCGCAAGATCAAGTCAGTCGCCGAACTGAAAGACGGCGCG
ACGATCGCTATCCCCAACGACCCGACCAACCTCGGGCGGGCGCTACTGCTGCTGCAAAAAGAGAAGCTGATTACCCTCAA
AGCCGGGACCGGCCTGCTGCCGACGGCGGTGGATATCACCGACAACCCGCATAACCTGAAGATCATGGAGCTGGAAGGGG
CGCAACTGCCGCGCGTACTCGACGATCCCAAAGTCGACGTGGCCATCATCAGCACCACCTACCTGCAGCAAACCGGGCTG
TCGCCGGTTCGTGACGGCATCTTTATCGAAGATAAAAACTCGCCCTACGTGAACATCATCGTGACCCGAGAAGACAATAA
AGACGCGGAAAACGTGAAGGAGTTTATGCAGTCGTACCAGTCGCCGGAGGTGGCGAAGGCGGCAGAGACTATCTTCAACG
GCGGCGCGGTGCCTGGCTGGTAA

Upstream 100 bases:

>100_bases
CGTCCTTCTCGAAGCGCTTCAAAATGCGCTATGGCGTGACGCCGGGCGAGTGGCGCCGGGGCTAGCGCCTCGCGTTTCGC
GAAGATGATTTTATTTCCAG

Downstream 100 bases:

>100_bases
GCCAACACACAGGGAGAGGCGCGTATGGTACGCCAACGGCAGGCTGACCTGCTGCTGATTGCCGCGACGGTGATTGCCGC
CTGCGGCTGGATATTTTCCC

Product: cytoplasmic membrane lipoprotein-28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRGLLFITRPESRYSFARKKTMTFRTDRVKRMRLRLRAAAAVMLAGLALVGCDQKGNEAKHIKVGVINGAEQDVAEVAKK
VAKEKYGLEVELVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYHLVAVGNTFVFPMAGYSRKIKSVAELKDGA
TIAIPNDPTNLGRALLLLQKEKLITLKAGTGLLPTAVDITDNPHNLKIMELEGAQLPRVLDDPKVDVAIISTTYLQQTGL
SPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKEFMQSYQSPEVAKAAETIFNGGAVPGW

Sequences:

>Translated_300_residues
MRGLLFITRPESRYSFARKKTMTFRTDRVKRMRLRLRAAAAVMLAGLALVGCDQKGNEAKHIKVGVINGAEQDVAEVAKK
VAKEKYGLEVELVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYHLVAVGNTFVFPMAGYSRKIKSVAELKDGA
TIAIPNDPTNLGRALLLLQKEKLITLKAGTGLLPTAVDITDNPHNLKIMELEGAQLPRVLDDPKVDVAIISTTYLQQTGL
SPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKEFMQSYQSPEVAKAAETIFNGGAVPGW
>Mature_300_residues
MRGLLFITRPESRYSFARKKTMTFRTDRVKRMRLRLRAAAAVMLAGLALVGCDQKGNEAKHIKVGVINGAEQDVAEVAKK
VAKEKYGLEVELVGFSGSLLPNESTNAGDLDANVFQHRPFLEQDNKAHNYHLVAVGNTFVFPMAGYSRKIKSVAELKDGA
TIAIPNDPTNLGRALLLLQKEKLITLKAGTGLLPTAVDITDNPHNLKIMELEGAQLPRVLDDPKVDVAIISTTYLQQTGL
SPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKEFMQSYQSPEVAKAAETIFNGGAVPGW

Specific function: Unknown

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell inner membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=87.14859437751, Blast_Score=459, Evalue=1e-131,
Organism=Escherichia coli, GI1786396, Length=269, Percent_Identity=63.9405204460966, Blast_Score=364, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 32945; Mature: 32945

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGLLFITRPESRYSFARKKTMTFRTDRVKRMRLRLRAAAAVMLAGLALVGCDQKGNEAK
CCCEEEEECCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
HIKVGVINGAEQDVAEVAKKVAKEKYGLEVELVGFSGSLLPNESTNAGDLDANVFQHRPF
EEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCC
LEQDNKAHNYHLVAVGNTFVFPMAGYSRKIKSVAELKDGATIAIPNDPTNLGRALLLLQK
CCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHEEEEEEC
EKLITLKAGTGLLPTAVDITDNPHNLKIMELEGAQLPRVLDDPKVDVAIISTTYLQQTGL
CEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCHHCCCCCCEEEEEEEHHHHHCCC
SPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKEFMQSYQSPEVAKAAETIFNGGAVPGW
CHHHCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRGLLFITRPESRYSFARKKTMTFRTDRVKRMRLRLRAAAAVMLAGLALVGCDQKGNEAK
CCCEEEEECCCHHHHHHHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC
HIKVGVINGAEQDVAEVAKKVAKEKYGLEVELVGFSGSLLPNESTNAGDLDANVFQHRPF
EEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCHHHHCCCC
LEQDNKAHNYHLVAVGNTFVFPMAGYSRKIKSVAELKDGATIAIPNDPTNLGRALLLLQK
CCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCEEEECCCCHHHHHEEEEEEC
EKLITLKAGTGLLPTAVDITDNPHNLKIMELEGAQLPRVLDDPKVDVAIISTTYLQQTGL
CEEEEEECCCCCCCEEEEECCCCCCEEEEEECCCCCCHHCCCCCCEEEEEEEHHHHHCCC
SPVRDGIFIEDKNSPYVNIIVTREDNKDAENVKEFMQSYQSPEVAKAAETIFNGGAVPGW
CHHHCCEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]