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The map label for this gene is yiaF [H]

Identifier: 238897016

GI number: 238897016

Start: 5007797

End: 5008507

Strand: Reverse

Name: yiaF [H]

Synonym: KP1_5262

Alternate gene names: 238897016

Gene position: 5008507-5007797 (Counterclockwise)

Preceding gene: 238897020

Following gene: 238897009

Centisome position: 95.43

GC content: 60.76

Gene sequence:

>711_bases
ATGGCGACAGGAAAGTCCTGCTCTCGCTGGTTTGCGGCTATGGCGGCCTTATTGATGGTGGTTAGCCTGAGTGGGTGTTT
TGATAAAGAGGGCGATCAGCGCAAAGCGTTTATCGACTTCCTGCAGAATACGGCGATGCGTAGCGGTGAACGTCTGCCGA
CGCTGACCGCCGATCAGAAAAAACAGTTTGGGCCTTTTGTCTCTGACTACGCGGTGATCTACGGTTACTCGCAGCAGGTG
AGCCAGGCGATGGACGCTGGTCTGCGCCCGGTGGTGGACAGCGTCAATGCGATCCGCGTCCCGCAGGATTATATGACCCA
GCGTGAGCCGCTGCGTCAGGCGAACGGCGCGCTGGGCGTGCTCAGCCAGCAGCTGCAGAATGCGAAAATGCAGGCCGATG
CCGCGCATGGCGCGCTGAAGCAGGCTGACGATCTCAAGCCGGTCTTCGATCAGGTTTACGCCAAGGTGGTGACGGCGCCA
GCCGACGCGCTGCAGCCGCTGATCCCGGCCGCGCAGATCTTTACCCAGCAGCTGGTTCAGGTTGGGGATTTTGTCGCTCA
GCAGGGGACGCAGGTGAGCTTTGTCGCCAACGGCATTCAGTTCCCAACCTCCCAGCAGGCCAGCCAGTACAATGCGCTGA
TTGGGCCGCTGGCGGCGCAGCATCAGGCGTTTAATCAGGCATGGACGGCGGCGGTGAACGCCACCCGTTAA

Upstream 100 bases:

>100_bases
GCAGGAAAGGGTATCCTGCGAGGCCGAGCTGGACTATCCTTGTCAGCGTCTGGCACGTGTGTGCCGTTGTGCGCTTTTTT
TGGCTGAAAGGAGTAAAAAA

Downstream 100 bases:

>100_bases
TGCTTCATCTGGCTGACGTTGGCTGCGGCGAACGGGCAGGATGATGGACAGGATGCAAAAAGAACCCGGGGAGGGCGGTT
GCCGCCGTTACCCGGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQKKQFGPFVSDYAVIYGYSQQV
SQAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGVLSQQLQNAKMQADAAHGALKQADDLKPVFDQVYAKVVTAP
ADALQPLIPAAQIFTQQLVQVGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR

Sequences:

>Translated_236_residues
MATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQKKQFGPFVSDYAVIYGYSQQV
SQAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGVLSQQLQNAKMQADAAHGALKQADDLKPVFDQVYAKVVTAP
ADALQPLIPAAQIFTQQLVQVGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR
>Mature_235_residues
ATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQKKQFGPFVSDYAVIYGYSQQVS
QAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGVLSQQLQNAKMQADAAHGALKQADDLKPVFDQVYAKVVTAPA
DALQPLIPAAQIFTQQLVQVGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=236, Percent_Identity=86.4406779661017, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 25530; Mature: 25399

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
KQFGPFVSDYAVIYGYSQQVSQAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGV
HHCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHCHHHEECCHHHHHHHHHHHHHCCHHHH
LSQQLQNAKMQADAAHGALKQADDLKPVFDQVYAKVVTAPADALQPLIPAAQIFTQQLVQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR
HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATGKSCSRWFAAMAALLMVVSLSGCFDKEGDQRKAFIDFLQNTAMRSGERLPTLTADQK
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHH
KQFGPFVSDYAVIYGYSQQVSQAMDAGLRPVVDSVNAIRVPQDYMTQREPLRQANGALGV
HHCCCHHHHHHHHHCCHHHHHHHHHCCCHHHHHCHHHEECCHHHHHHHHHHHHHCCHHHH
LSQQLQNAKMQADAAHGALKQADDLKPVFDQVYAKVVTAPADALQPLIPAAQIFTQQLVQ
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VGDFVAQQGTQVSFVANGIQFPTSQQASQYNALIGPLAAQHQAFNQAWTAAVNATR
HHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]