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The map label for this gene is hofN [H]

Identifier: 238896862

GI number: 238896862

Start: 4824959

End: 4825525

Strand: Reverse

Name: hofN [H]

Synonym: KP1_5095

Alternate gene names: 238896862

Gene position: 4825525-4824959 (Counterclockwise)

Preceding gene: 238896863

Following gene: 238896861

Centisome position: 91.94

GC content: 68.25

Gene sequence:

>567_bases
TTGCCCTTGGGCTGGCGCTGGGAGGCGGGCGGCATGACGCATGTCGTTAATCTTCTTCCCTGGCGCGACCTGCGTCGCCG
CCAGCGCCTGCGCTACGTCCTGTTGTTAACCATCGGCATTGTGCTGCTGGGGGGGATGGGCCTGCTGGTGAGCCGAACGG
CGCGTCTGCAGCGCGACTTCCTGGCGACGCTTCACACGACGGCCGACGCGCAGCTGCTCGCTTCGCTTAAGCAGCGCGAG
CAGGCGATGCGTGAGGCGTGGCAGCAGCATCAACGGCAGCGCCAGCAGTACCAGCGCAGATCGGCGATCGCCGCCTGGCA
ACCCAGGCTGCAGGCGCTGGCGGCAGATCTGCCCGCGCAGGCGTGGCTGACGCGGCTGGAGTACCAGGGCGTACTCCTCA
CGCTGGACGGCCTGGCCCTTAACCTGCAGGCGCTAACCAGCGTGGAGGCTGCGCTGACTCGCGTCGCGGGATTCGCGCCG
GCAAAAGCCGGCGGGACCCAGCGCGACGCCGAGGGGCGTTGGCAGTTCAGTTTTACCCTGACGGGAGCGCGCGCTGATGC
GGATTAA

Upstream 100 bases:

>100_bases
CTGTGTATTGACGCGGGCGATGAGGCCAGTCGCTTTGATGTCTGGCAAGTGATTCACCGTCGGCAGCCCCCGCTGCCAGC
CGATGGCGATCGTTACGCCA

Downstream 100 bases:

>100_bases
CCTTCGGGGCGCCTGGACGGGGCTGCCGATCCTGCTCGCAATGGGGCTGTCGGGAGGCGGCGTGGCGCTCTGGCGCGATC
TGCGCCCGCCGCAGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPLGWRWEAGGMTHVVNLLPWRDLRRRQRLRYVLLLTIGIVLLGGMGLLVSRTARLQRDFLATLHTTADAQLLASLKQRE
QAMREAWQQHQRQRQQYQRRSAIAAWQPRLQALAADLPAQAWLTRLEYQGVLLTLDGLALNLQALTSVEAALTRVAGFAP
AKAGGTQRDAEGRWQFSFTLTGARADAD

Sequences:

>Translated_188_residues
MPLGWRWEAGGMTHVVNLLPWRDLRRRQRLRYVLLLTIGIVLLGGMGLLVSRTARLQRDFLATLHTTADAQLLASLKQRE
QAMREAWQQHQRQRQQYQRRSAIAAWQPRLQALAADLPAQAWLTRLEYQGVLLTLDGLALNLQALTSVEAALTRVAGFAP
AKAGGTQRDAEGRWQFSFTLTGARADAD
>Mature_187_residues
PLGWRWEAGGMTHVVNLLPWRDLRRRQRLRYVLLLTIGIVLLGGMGLLVSRTARLQRDFLATLHTTADAQLLASLKQREQ
AMREAWQQHQRQRQQYQRRSAIAAWQPRLQALAADLPAQAWLTRLEYQGVLLTLDGLALNLQALTSVEAALTRVAGFAPA
KAGGTQRDAEGRWQFSFTLTGARADAD

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: COG3166

COG function: function code NU; Tfp pilus assembly protein PilN

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789796, Length=176, Percent_Identity=36.3636363636364, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007813 [H]

Pfam domain/function: PF05137 PilN [H]

EC number: NA

Molecular weight: Translated: 21165; Mature: 21034

Theoretical pI: Translated: 11.87; Mature: 11.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLGWRWEAGGMTHVVNLLPWRDLRRRQRLRYVLLLTIGIVLLGGMGLLVSRTARLQRDF
CCCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LATLHTTADAQLLASLKQREQAMREAWQQHQRQRQQYQRRSAIAAWQPRLQALAADLPAQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AWLTRLEYQGVLLTLDGLALNLQALTSVEAALTRVAGFAPAKAGGTQRDAEGRWQFSFTL
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
TGARADAD
ECCCCCCC
>Mature Secondary Structure 
PLGWRWEAGGMTHVVNLLPWRDLRRRQRLRYVLLLTIGIVLLGGMGLLVSRTARLQRDF
CCCCEECCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LATLHTTADAQLLASLKQREQAMREAWQQHQRQRQQYQRRSAIAAWQPRLQALAADLPAQ
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
AWLTRLEYQGVLLTLDGLALNLQALTSVEAALTRVAGFAPAKAGGTQRDAEGRWQFSFTL
HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEE
TGARADAD
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]