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The map label for this gene is yhcQ [H]

Identifier: 238896747

GI number: 238896747

Start: 4725339

End: 4726271

Strand: Reverse

Name: yhcQ [H]

Synonym: KP1_4966

Alternate gene names: 238896747

Gene position: 4726271-4725339 (Counterclockwise)

Preceding gene: 238896748

Following gene: 238896746

Centisome position: 90.05

GC content: 56.27

Gene sequence:

>933_bases
GTGAAAACACTAACAAGAAATATCCTCCGTACTGCCATTACCGTGATACTGGTCATTCTGGCCTTCGTGGCGATTTTCCG
CGCCTGGGTTTATTACACCGCCTCGCCGTGGACGCGTGATGCGCGCTTTAGCGCCGATATTGTGGCGATTGCCCCCGACG
TCTCCGGGCTGATTTCTCAGGTAAACGTCAAGGATAACCAACTGGTTAAGAAAGACCAGGTATTGTTCGTTATTGACCAA
CCTCGTTACCAAAAAGCGCTGGCGCAGGCGGAAGCTGATGTCGCCTATTATCAGACGTTAGCTCAGGAAAAACGCGTCGA
AGCCGGTCGGCGTAATAAGCTTGGCGTACAGGCGATGTCGCGGGAAGAGATTGATCAGGCGAACAACGTACTGCAAACCG
TTGAACATCAGCTGGCGAAAGCGGTGGCTAGTCGCGACCTGGCCAGGCTAGATCTGGAGCGGACGGTCATTCGCGCCCCT
GCGGATGGCTGGGTGACTAACCTTAACGTCTACACTGGGGAATTTATCACCCGTGGCTCCACGGCGGTGGCGCTGGTGAA
AGAGAATACGTTTTACGTCATGGCCTATCTGGAAGAGACCAAACTGGAGGGCGTCCGTCCAGGCTATCGTGCGGAGATTA
CCCCGCTGGGCAGCAGCAAAACCATTAAAGGGACGGTGGACAGTATCGCTGCGGGGGTGACCAACGCCAGCAGCAGCAGC
GACTCGAAAGGGATGGCCTCGGTCGACTCCAACCTTGAGTGGGTGCGTCTGGCGCAGCGTGTGCCGGTGCGTATTCGCCT
CGATCACCAGCAGGGGAATCTGTGGCCATCGGGCACCACGGCGACGGTAGTGATCACCGGTCAAGAAGATCGTGATACCA
GCCAGGCCAACTTCTTCCAGAAACTGGCTATGCGCCTGCGCGAATTTGGTTAA

Upstream 100 bases:

>100_bases
ACCGGCATTTACGATTTTGTCTGGCACCCAGCACTGTTTAATACGGCGCTCTATTGCTGCCTTTTTTATTTGATATCGCG
CTTGTTCGTTTGAGGTTGAT

Downstream 100 bases:

>100_bases
TCGCTATGGGGACATATACCATTGCTCCCCGGCATCTCCGCTTTGCCATTAAGCTTGCATGCGCGGTGGTGCTGGCGCTG
TTTGTCGGTTTCCATTTTCA

Product: p-hydroxybenzoic acid efflux subunit AaeA

Products: NA

Alternate protein names: pHBA efflux pump protein A [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQVNVKDNQLVKKDQVLFVIDQ
PRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMSREEIDQANNVLQTVEHQLAKAVASRDLARLDLERTVIRAP
ADGWVTNLNVYTGEFITRGSTAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS
DSKGMASVDSNLEWVRLAQRVPVRIRLDHQQGNLWPSGTTATVVITGQEDRDTSQANFFQKLAMRLREFG

Sequences:

>Translated_310_residues
MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQVNVKDNQLVKKDQVLFVIDQ
PRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMSREEIDQANNVLQTVEHQLAKAVASRDLARLDLERTVIRAP
ADGWVTNLNVYTGEFITRGSTAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS
DSKGMASVDSNLEWVRLAQRVPVRIRLDHQQGNLWPSGTTATVVITGQEDRDTSQANFFQKLAMRLREFG
>Mature_310_residues
MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQVNVKDNQLVKKDQVLFVIDQ
PRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMSREEIDQANNVLQTVEHQLAKAVASRDLARLDLERTVIRAP
ADGWVTNLNVYTGEFITRGSTAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS
DSKGMASVDSNLEWVRLAQRVPVRIRLDHQQGNLWPSGTTATVVITGQEDRDTSQANFFQKLAMRLREFG

Specific function: Unknown

COG id: COG1566

COG function: function code V; Multidrug resistance efflux pump

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789637, Length=310, Percent_Identity=83.8709677419355, Blast_Score=546, Evalue=1e-157,
Organism=Escherichia coli, GI87081951, Length=273, Percent_Identity=41.025641025641, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1790519, Length=309, Percent_Identity=30.0970873786408, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1788711, Length=309, Percent_Identity=24.5954692556634, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1789041, Length=288, Percent_Identity=24.3055555555556, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022871
- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 34396; Mature: 34396

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHH
VNVKDNQLVKKDQVLFVIDQPRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMS
CCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
REEIDQANNVLQTVEHQLAKAVASRDLARLDLERTVIRAPADGWVTNLNVYTGEFITRGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCEEECCC
TAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS
EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEECCCHHHHHHCCCCCCCCC
DSKGMASVDSNLEWVRLAQRVPVRIRLDHQQGNLWPSGTTATVVITGQEDRDTSQANFFQ
CCCCCHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
KLAMRLREFG
HHHHHHHHCC
>Mature Secondary Structure
MKTLTRNILRTAITVILVILAFVAIFRAWVYYTASPWTRDARFSADIVAIAPDVSGLISQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHH
VNVKDNQLVKKDQVLFVIDQPRYQKALAQAEADVAYYQTLAQEKRVEAGRRNKLGVQAMS
CCCCCCCEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
REEIDQANNVLQTVEHQLAKAVASRDLARLDLERTVIRAPADGWVTNLNVYTGEFITRGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEEECCEEECCC
TAVALVKENTFYVMAYLEETKLEGVRPGYRAEITPLGSSKTIKGTVDSIAAGVTNASSSS
EEEEEEECCCEEEEEEEEHHHCCCCCCCCCEEEEECCCCCEECCCHHHHHHCCCCCCCCC
DSKGMASVDSNLEWVRLAQRVPVRIRLDHQQGNLWPSGTTATVVITGQEDRDTSQANFFQ
CCCCCHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCHHHHHHH
KLAMRLREFG
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA