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The map label for this gene is hdeD [H]

Identifier: 238896577

GI number: 238896577

Start: 4558713

End: 4559288

Strand: Direct

Name: hdeD [H]

Synonym: KP1_4776

Alternate gene names: 238896577

Gene position: 4558713-4559288 (Clockwise)

Preceding gene: 238896576

Following gene: 238896578

Centisome position: 86.86

GC content: 50.52

Gene sequence:

>576_bases
ATGTTTATGTTTAGCCATTACACTTTAAATGCGTTTAGCCCACGCGTCTTCATTCGATATAAACGGCATGCCTGCCTGAT
GGCGGTATTGCTGTTTATCTGCGGAGCCTGTTGTCTGGCCTGGCCGTTGGTCGCCGGCTGGTATCTCGCCACAGTAACCG
GCATGTTATTGATGATCTGCGGCTTCTATTCGCTGTACAGCCTGATTGTCTTCCGCCAGCAGCACTGGAAATCACGCCTG
GTGGCGCTGATCTTCGCCATCGCCTGGATCGTGCTCGGCCTGAGCTTTGTCGTCAATCCCCTCAACGGTATGAGCAGTCT
GGCCATTTTATTTGGCTTTTTATTTGTTCTCGGCGGTATTTCCCGCATCGTTAACGGATGTCAAACCCGCAAACAAAGCG
GCGCTGGCTGGAATATTTTTATCGGCCTGTTGGATTTACTTATCGCCTGCCTGTGGCTGGCCATGAACCCGCAGCAAAGC
TGGTTATTTATTACCGCCTTTATCGGCGTTGAAATGATATTTAGCGCCATCGGCTTGTTGGTCCTGCGCAATAAAATGAA
GCACGCTCAGGCTTAA

Upstream 100 bases:

>100_bases
CGGCCTACTATTTTCCTCAGACCTTTCTTTTGGCCCGCTGAATAAATCCTCACGCTTTTTATTCAGCGTCAGGCCGCCAA
CCGGGATCTGCGGAGCAATT

Downstream 100 bases:

>100_bases
GCCCTATTTTGACACTGGAGAAGAAAATGAATTTACCTAAAGCACTCGTATTGACCGTGGCGGCTACCACATTCTGTCTG
ATGACCAGCCCGGCGTTCGC

Product: acid-resistance membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 191

Protein sequence:

>191_residues
MFMFSHYTLNAFSPRVFIRYKRHACLMAVLLFICGACCLAWPLVAGWYLATVTGMLLMICGFYSLYSLIVFRQQHWKSRL
VALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGISRIVNGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQS
WLFITAFIGVEMIFSAIGLLVLRNKMKHAQA

Sequences:

>Translated_191_residues
MFMFSHYTLNAFSPRVFIRYKRHACLMAVLLFICGACCLAWPLVAGWYLATVTGMLLMICGFYSLYSLIVFRQQHWKSRL
VALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGISRIVNGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQS
WLFITAFIGVEMIFSAIGLLVLRNKMKHAQA
>Mature_191_residues
MFMFSHYTLNAFSPRVFIRYKRHACLMAVLLFICGACCLAWPLVAGWYLATVTGMLLMICGFYSLYSLIVFRQQHWKSRL
VALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGISRIVNGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQS
WLFITAFIGVEMIFSAIGLLVLRNKMKHAQA

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789927, Length=179, Percent_Identity=30.1675977653631, Blast_Score=88, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21455; Mature: 21455

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMFSHYTLNAFSPRVFIRYKRHACLMAVLLFICGACCLAWPLVAGWYLATVTGMLLMIC
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYSLYSLIVFRQQHWKSRLVALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SRIVNGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQSWLFITAFIGVEMIFSAIGLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLRNKMKHAQA
HHHHHHHHCCC
>Mature Secondary Structure
MFMFSHYTLNAFSPRVFIRYKRHACLMAVLLFICGACCLAWPLVAGWYLATVTGMLLMIC
CCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYSLYSLIVFRQQHWKSRLVALIFAIAWIVLGLSFVVNPLNGMSSLAILFGFLFVLGGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
SRIVNGCQTRKQSGAGWNIFIGLLDLLIACLWLAMNPQQSWLFITAFIGVEMIFSAIGLL
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VLRNKMKHAQA
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]