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The map label for this gene is hdeB [H]

Identifier: 238896578

GI number: 238896578

Start: 4559297

End: 4559620

Strand: Direct

Name: hdeB [H]

Synonym: KP1_4777

Alternate gene names: 238896578

Gene position: 4559297-4559620 (Clockwise)

Preceding gene: 238896577

Following gene: 238896584

Centisome position: 86.87

GC content: 50.93

Gene sequence:

>324_bases
TTGACACTGGAGAAGAAAATGAATTTACCTAAAGCACTCGTATTGACCGTGGCGGCTACCACATTCTGTCTGATGACCAG
CCCGGCGTTCGCGGTTGAGGAAACCACGCCGCAGAATATGACCTGTCAGGAATTTATGGATATGAACCCAAAAAGCATGA
CCCCGGTAGCCTTCTGGGTAGTGAATCGCAACACCGACTTTAGCGGCGGCGACTATGTTGACTGGCATGAAGTCGAGACC
GTTTCGGTACCGAAAATGCTGCAGGAGTGCCACAAGAACCCCGCCGCTAAACTTGGCGATCTCAGCGCGGTCATCAAAAA
ATAA

Upstream 100 bases:

>100_bases
TATTTATTACCGCCTTTATCGGCGTTGAAATGATATTTAGCGCCATCGGCTTGTTGGTCCTGCGCAATAAAATGAAGCAC
GCTCAGGCTTAAGCCCTATT

Downstream 100 bases:

>100_bases
CCCCCCCGGCATCAGGCCGGGGAAACCCGCCGCGCTGCGGCGGGTCCCGCTTTACTCATCGATACCGCATTCGCACGGCA
GATGGCGGCCGATAAGCTTG

Product: acid-resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTLEKKMNLPKALVLTVAATTFCLMTSPAFAVEETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYVDWHEVET
VSVPKMLQECHKNPAAKLGDLSAVIKK

Sequences:

>Translated_107_residues
MTLEKKMNLPKALVLTVAATTFCLMTSPAFAVEETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYVDWHEVET
VSVPKMLQECHKNPAAKLGDLSAVIKK
>Mature_106_residues
TLEKKMNLPKALVLTVAATTFCLMTSPAFAVEETTPQNMTCQEFMDMNPKSMTPVAFWVVNRNTDFSGGDYVDWHEVETV
SVPKMLQECHKNPAAKLGDLSAVIKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082279, Length=90, Percent_Identity=37.7777777777778, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010486 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11928; Mature: 11797

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
7.5 %Met     (Translated Protein)
10.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEKKMNLPKALVLTVAATTFCLMTSPAFAVEETTPQNMTCQEFMDMNPKSMTPVAFWV
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHCCCCCCCCCEEEEE
VNRNTDFSGGDYVDWHEVETVSVPKMLQECHKNPAAKLGDLSAVIKK
EECCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
TLEKKMNLPKALVLTVAATTFCLMTSPAFAVEETTPQNMTCQEFMDMNPKSMTPVAFWV
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCHHHHHCCCCCCCCCEEEEE
VNRNTDFSGGDYVDWHEVETVSVPKMLQECHKNPAAKLGDLSAVIKK
EECCCCCCCCCCCCCCCCCEECHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]