Click here to switch to the map view.

The map label for this gene is 238896425

Identifier: 238896425

GI number: 238896425

Start: 4403440

End: 4404288

Strand: Direct

Name: 238896425

Synonym: KP1_4600

Alternate gene names: NA

Gene position: 4403440-4404288 (Clockwise)

Preceding gene: 238896424

Following gene: 238896427

Centisome position: 83.9

GC content: 59.6

Gene sequence:

>849_bases
GTGGACGCGCTAACGATCCGCCCTGCGGATCGGAAAGGAGCAAATATGAAAAACGTGATTGCCGCGGCAGCCTTGTCGCT
TGTGCTGTCTGATTTTACTTATGCCCACGAACAAAGAGATGAAGCTATGATGAAAATTACCCCTTCCACCCTTGCGGACG
CTGATATTCAAGCGGTCTCCCCGGCGCTGGCGCGCTTCGGCCGCGAGGCCATCAGCAACGACCTCTGGCAACGTGACGCC
CTCTCCGCCCGCGACCGTAGCATCGTGACCGTAGCGATGCTGATTGCCCGCAACCAGCCAGGCGAGCTGAAGCACTATAT
TGCCGTTGCGCTCGATAGCGGCGTGACGCCAGCGGAAGTGTCAGAGATCATTACTCACCTCGCCTTCTACGCTGGCTGGC
CCAATGCGATGTCAGCCGTCAGCGTCGCTAAAGCCATCTTTGAAGCCAGGGGCGTGACGGCAGAGGCCCTGCCCGCCGCC
TCGCCAACGCTGCTGCCACTCAATGAACAGGTAGAGAAACAGCGTGCAGACACCGTGGAAAAAAATGTCGGCCCCATTTC
GCCTGGCCTGGTTAAATTTACCGCCGACCCGCTGTTTCTCGACCTCTGGCAACGGCCCGCGCTTACGCCCCGCGACAGAA
GTCTGGTGACGGTCAGCGCGTTAATCGCCGCCGGACAGAGCGCGCAGATTGGCTACCACCTAAACAGAGCTATGGATAAT
GGGCTTTCGGCTGAAGAGGCCGGAGAAGTAGTCGCCCAGGCGGCGTTCTACGCGGGATGGCCAAATGCGTTTACCGCCGC
CCCGGTGGTCGGTGAGGTATTGCGAGCGCGCGAGAGCAAAGCTGAATAA

Upstream 100 bases:

>100_bases
GCCCGGAAGACATCCGTTATCTGGAAGAAGCCTATCCGCCGCACTTCCTCACAGGCGTGATGGCGCAAAACACGCCGCAA
GCCAAAGACCGTCCTCAGGT

Downstream 100 bases:

>100_bases
AAAAGAATAAAGGACAGGGAAGCTGTCCTTTATTTATCGTTAATTGTTAATTTAAAGGTACCACGAGGGCTTTCGATTAG
GTCTCGCGGAAAGAACATAA

Product: putative carboxymuconolactone decarboxylase

Products: NA

Alternate protein names: 4-Carboxymuconolactone Decarboxylase; Carboxymuconolactone Decarboxylase Family Protein; 4-Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Protein; Gamma-Carboxymuconolactone Decarboxylase; Decarboxylase

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MDALTIRPADRKGANMKNVIAAAALSLVLSDFTYAHEQRDEAMMKITPSTLADADIQAVSPALARFGREAISNDLWQRDA
LSARDRSIVTVAMLIARNQPGELKHYIAVALDSGVTPAEVSEIITHLAFYAGWPNAMSAVSVAKAIFEARGVTAEALPAA
SPTLLPLNEQVEKQRADTVEKNVGPISPGLVKFTADPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDN
GLSAEEAGEVVAQAAFYAGWPNAFTAAPVVGEVLRARESKAE

Sequences:

>Translated_282_residues
MDALTIRPADRKGANMKNVIAAAALSLVLSDFTYAHEQRDEAMMKITPSTLADADIQAVSPALARFGREAISNDLWQRDA
LSARDRSIVTVAMLIARNQPGELKHYIAVALDSGVTPAEVSEIITHLAFYAGWPNAMSAVSVAKAIFEARGVTAEALPAA
SPTLLPLNEQVEKQRADTVEKNVGPISPGLVKFTADPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDN
GLSAEEAGEVVAQAAFYAGWPNAFTAAPVVGEVLRARESKAE
>Mature_282_residues
MDALTIRPADRKGANMKNVIAAAALSLVLSDFTYAHEQRDEAMMKITPSTLADADIQAVSPALARFGREAISNDLWQRDA
LSARDRSIVTVAMLIARNQPGELKHYIAVALDSGVTPAEVSEIITHLAFYAGWPNAMSAVSVAKAIFEARGVTAEALPAA
SPTLLPLNEQVEKQRADTVEKNVGPISPGLVKFTADPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDN
GLSAEEAGEVVAQAAFYAGWPNAFTAAPVVGEVLRARESKAE

Specific function: Unknown

COG id: COG0599

COG function: function code S; Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30115; Mature: 30115

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALTIRPADRKGANMKNVIAAAALSLVLSDFTYAHEQRDEAMMKITPSTLADADIQAVS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCHHHHHH
PALARFGREAISNDLWQRDALSARDRSIVTVAMLIARNQPGELKHYIAVALDSGVTPAEV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHEEECCCCCHHHH
SEIITHLAFYAGWPNAMSAVSVAKAIFEARGVTAEALPAASPTLLPLNEQVEKQRADTVE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCHHHHHHHHHHHHH
KNVGPISPGLVKFTADPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDN
HCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHC
GLSAEEAGEVVAQAAFYAGWPNAFTAAPVVGEVLRARESKAE
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDALTIRPADRKGANMKNVIAAAALSLVLSDFTYAHEQRDEAMMKITPSTLADADIQAVS
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCHHHHHH
PALARFGREAISNDLWQRDALSARDRSIVTVAMLIARNQPGELKHYIAVALDSGVTPAEV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHEEECCCCCHHHH
SEIITHLAFYAGWPNAMSAVSVAKAIFEARGVTAEALPAASPTLLPLNEQVEKQRADTVE
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCHHHHHHHHHHHHH
KNVGPISPGLVKFTADPLFLDLWQRPALTPRDRSLVTVSALIAAGQSAQIGYHLNRAMDN
HCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHC
GLSAEEAGEVVAQAAFYAGWPNAFTAAPVVGEVLRARESKAE
CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA