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The map label for this gene is ydbC [H]

Identifier: 238896382

GI number: 238896382

Start: 4364788

End: 4365666

Strand: Direct

Name: ydbC [H]

Synonym: KP1_4550

Alternate gene names: 238896382

Gene position: 4364788-4365666 (Clockwise)

Preceding gene: 238896381

Following gene: 238896383

Centisome position: 83.16

GC content: 62.68

Gene sequence:

>879_bases
ATGTCCAGTGTCACCTTATCCGGTCGCGGCACGCTCGGCGATCACCAGGTCTATCGCTTAGGTTACGGCGCGATGCAGCT
GGCCGGCCCCGGTGTTTTCGGCCCGCCCAAAGATCCTGGAGAAGCGGTGCGCGTACTACAGGCCGCCGTCGAGGCCGGGA
TAAACCATATCGATACCTCTGATTTCTACGGTCCACATGTCACCAATCAGTTGATCCGCAAAGCGCTCCACCCCTACCCT
GACGATCTGTGCATTGTCACCAAGGTCAGCGCCCGCCGTGACGAGAAAGGCAACTGGCTACCGGCCATGTCGCCCGCCGA
ACTGACCCAGGCCGTTGAAGACAATTTGCGTCACCTGGGGCTTGAGGTACTGGAAGTGGTTAATCTGCGCAGTATGCTGA
GCCCGCACGGCCCGGTGGAGGGTTCGCTGGAGGCGCCACTCGCCACCCTGCTGGAACTGAAAGAGCGAGGATTAATCCGC
CATATCGGCCTCAGCAACGTGACGGCAAAGCAGGTCGCGGATGCGCAGAAAATGACGCCCATCGTCTGCGTGCAAAACCT
TTATAACGTTGCCCATCGCGCCGACGACGCGCTGGTGGATGCGCTGGCCGCCCAGCACATCGCCTGGGTGCCCTTCTTCC
CGCTGGGCGGTTTTACGCCGTTGCAGGCGCAGGAGTTGAACGAGGTCGCGGCTTCGCTTGAGGCGACGCCGATGCAGGTC
GCCCTCGCCTGGCTGCTCCAGCGAGCGCCAAATATTCTGCTGATCCCCGGCACCTCCTCCCGCACGCACCTCGCGGAAAA
TATTGCCGCTGCCGAGCTGGTCCTGCCCGCGGAAGCGCTGCGCACCCTCGATAATATCGCCACCGCCGCGCGCCGCTGA

Upstream 100 bases:

>100_bases
GCTGCCTGAGCTGCTGTCGCACATTCTGACAATATTCTCCCCCTTGCCTTCCTTGTGAGCGGATTACACTTACGGCTTAG
CCACCGTGAGGAGAGTTCTT

Downstream 100 bases:

>100_bases
CCTGCCAGACAAAATGGAGGGAACCCTATCCCTCCTCAATATTTGCCTGGAAAAACCTCACCACTACTGGCACTATAGAT
CCTACAAATGGGGCGTGATC

Product: putative aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSSVTLSGRGTLGDHQVYRLGYGAMQLAGPGVFGPPKDPGEAVRVLQAAVEAGINHIDTSDFYGPHVTNQLIRKALHPYP
DDLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRHLGLEVLEVVNLRSMLSPHGPVEGSLEAPLATLLELKERGLIR
HIGLSNVTAKQVADAQKMTPIVCVQNLYNVAHRADDALVDALAAQHIAWVPFFPLGGFTPLQAQELNEVAASLEATPMQV
ALAWLLQRAPNILLIPGTSSRTHLAENIAAAELVLPAEALRTLDNIATAARR

Sequences:

>Translated_292_residues
MSSVTLSGRGTLGDHQVYRLGYGAMQLAGPGVFGPPKDPGEAVRVLQAAVEAGINHIDTSDFYGPHVTNQLIRKALHPYP
DDLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRHLGLEVLEVVNLRSMLSPHGPVEGSLEAPLATLLELKERGLIR
HIGLSNVTAKQVADAQKMTPIVCVQNLYNVAHRADDALVDALAAQHIAWVPFFPLGGFTPLQAQELNEVAASLEATPMQV
ALAWLLQRAPNILLIPGTSSRTHLAENIAAAELVLPAEALRTLDNIATAARR
>Mature_291_residues
SSVTLSGRGTLGDHQVYRLGYGAMQLAGPGVFGPPKDPGEAVRVLQAAVEAGINHIDTSDFYGPHVTNQLIRKALHPYPD
DLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRHLGLEVLEVVNLRSMLSPHGPVEGSLEAPLATLLELKERGLIRH
IGLSNVTAKQVADAQKMTPIVCVQNLYNVAHRADDALVDALAAQHIAWVPFFPLGGFTPLQAQELNEVAASLEATPMQVA
LAWLLQRAPNILLIPGTSSRTHLAENIAAAELVLPAEALRTLDNIATAARR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=288, Percent_Identity=68.0555555555556, Blast_Score=394, Evalue=1e-111,
Organism=Escherichia coli, GI87081735, Length=318, Percent_Identity=27.3584905660377, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1786400, Length=236, Percent_Identity=28.8135593220339, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644950, Length=288, Percent_Identity=25.6944444444444, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31383; Mature: 31252

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSVTLSGRGTLGDHQVYRLGYGAMQLAGPGVFGPPKDPGEAVRVLQAAVEAGINHIDTS
CCCEEECCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
DFYGPHVTNQLIRKALHPYPDDLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRHLG
CCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LEVLEVVNLRSMLSPHGPVEGSLEAPLATLLELKERGLIRHIGLSNVTAKQVADAQKMTP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCH
IVCVQNLYNVAHRADDALVDALAAQHIAWVPFFPLGGFTPLQAQELNEVAASLEATPMQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
ALAWLLQRAPNILLIPGTSSRTHLAENIAAAELVLPAEALRTLDNIATAARR
HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSVTLSGRGTLGDHQVYRLGYGAMQLAGPGVFGPPKDPGEAVRVLQAAVEAGINHIDTS
CCEEECCCCCCCCCHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
DFYGPHVTNQLIRKALHPYPDDLCIVTKVSARRDEKGNWLPAMSPAELTQAVEDNLRHLG
CCCCHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
LEVLEVVNLRSMLSPHGPVEGSLEAPLATLLELKERGLIRHIGLSNVTAKQVADAQKMTP
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCH
IVCVQNLYNVAHRADDALVDALAAQHIAWVPFFPLGGFTPLQAQELNEVAASLEATPMQV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHH
ALAWLLQRAPNILLIPGTSSRTHLAENIAAAELVLPAEALRTLDNIATAARR
HHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]