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The map label for this gene is rnfA

Identifier: 238896380

GI number: 238896380

Start: 4362855

End: 4363316

Strand: Direct

Name: rnfA

Synonym: KP1_4548

Alternate gene names: NA

Gene position: 4362855-4363316 (Clockwise)

Preceding gene: 238896376

Following gene: 238896381

Centisome position: 83.13

GC content: 61.26

Gene sequence:

>462_bases
ATGCAACAGACCCCACATCAGCGCAAGACGCTCACCGAACGCGTTATCCACGCCATCACCTTCGAAGGACTGGCGACGCT
GATCCTCGCCCCTACCGCCGCCTGGCTGATGCAGCGCTCGGTAGTGGAGATGGGCGGACTGAGCATTCTGCTCGCCACCC
TGGCGATGGTATGGAACATTATCTATAACGCGGCGTTCGATCGCCTGTGGCCGGTCTCCCGCTTCCCCCGCCAGCTGAAA
GTACGCGCCCTGCACGCGCTCGGTTTCGAAACCGGATTCGTCATCATTGGCGTCACCATGGTGGCGATCGTGCTGGGCGT
CTCGCTGCTGCAGGCGTTTATGCTGGAGATCGGTTTTATGCTTTTCTTCCTGCCCTACACCATGGCCTTTAACTGGGTAT
GGGACACCCTGCGCGAGCGCGTTATTCGTCACCGCCGCCCGCGCCAGACGGCGCGCGGTTAA

Upstream 100 bases:

>100_bases
TGTATCTACAATATCGATGGGTCCTATCTTTTGTTTATCATATTTTTCCATAAACTGCCGGGTAATTTCCTGTTCAGGCT
AAAACTGGAGGTAGCTCGCC

Downstream 100 bases:

>100_bases
TCCCGGCGCGGATCTTCGACGATCCGCCGCGACTTTATCACCAAAAACTATCGCAACAGACGAACCATAAATATGGTAAA
TTGCACTCCTTTTTTTTGGT

Product: Na(+)-translocating NADH-quinone reductase subunit E

Products: NA

Alternate protein names: Transmembrane Pair Domain Protein; Transmembrane Pair; Transmembrane Pair Permease Of Facilitator Superfamily; Bacterial Transmembrane Pair Family; Outer Membrane Protein; Transmembrane Pair Protein; Transmembrane Pair Family Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQQTPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNIIYNAAFDRLWPVSRFPRQLK
VRALHALGFETGFVIIGVTMVAIVLGVSLLQAFMLEIGFMLFFLPYTMAFNWVWDTLRERVIRHRRPRQTARG

Sequences:

>Translated_153_residues
MQQTPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNIIYNAAFDRLWPVSRFPRQLK
VRALHALGFETGFVIIGVTMVAIVLGVSLLQAFMLEIGFMLFFLPYTMAFNWVWDTLRERVIRHRRPRQTARG
>Mature_153_residues
MQQTPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNIIYNAAFDRLWPVSRFPRQLK
VRALHALGFETGFVIIGVTMVAIVLGVSLLQAFMLEIGFMLFFLPYTMAFNWVWDTLRERVIRHRRPRQTARG

Specific function: Unknown

COG id: COG4125

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17553; Mature: 17553

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQTPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYNAAFDRLWPVSRFPRQLKVRALHALGFETGFVIIGVTMVAIVLGVSLLQAFMLEIGFM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLPYTMAFNWVWDTLRERVIRHRRPRQTARG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQQTPHQRKTLTERVIHAITFEGLATLILAPTAAWLMQRSVVEMGGLSILLATLAMVWNI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IYNAAFDRLWPVSRFPRQLKVRALHALGFETGFVIIGVTMVAIVLGVSLLQAFMLEIGFM
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFFLPYTMAFNWVWDTLRERVIRHRRPRQTARG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA