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The map label for this gene is togM [H]

Identifier: 238896364

GI number: 238896364

Start: 4345684

End: 4346574

Strand: Direct

Name: togM [H]

Synonym: KP1_4531

Alternate gene names: 238896364

Gene position: 4345684-4346574 (Clockwise)

Preceding gene: 238896362

Following gene: 238896365

Centisome position: 82.8

GC content: 53.98

Gene sequence:

>891_bases
ATGAATGAAAACAAGCTGCTGGGATTGGCATGGATATCGCCCTATATCATCGGGCTGATCGTCTTTACCGCTTTTCCCTT
TGTTTCATCTTTCTTTCTCAGTTTTACCGAGTACGACTTGATGAGCCCGCCGGTATTTAACGGCATCGAAAACTATCGCT
ATATGTTGACCGAGGATAGCCTGTTCTGGAAATCGATGGGGGTGACCTTTGCCTACGTCTTTTTAACCATCCCCTTAAAA
CTGGCTTTCGCCCTCGGCATTGCTTTTGTGCTCAATTTCAAACTGCGCGGCATCGGCTTTTTCCGCACCGCCTATTACAT
CCCGTCGATCCTTGGCAGCTCGGTGGCGATTGCCGTGCTGTGGCGCGCCCTGTTCGCCATTGACGGCCTGCTGAACAGTT
TTCTCGCCGTCTTTGGCATCGATGCCATCAACTGGCTGGGGGAACCCTCCCTGGCGCTGATGTCGGTCACCCTGCTGCGC
GTCTGGCAGTTTGGCTCCGCGATGGTCATCTTCCTCGCCGCGCTGCAGAACGTTCCGCAGTCGCAGTATGAGGCGGCAAT
GATTGACGGCGCCTCAAAGTGGCAGATGTTCATGAAGGTCACCGTGCCGCTGATCACCCCGGTGATTTTCTTCAACTTTA
TTATGCAGACCACCCAGGCGTTCCAGGAGTTTACCGGCCCGTACGTGATAACCGGCGGCGGTCCGACCTATTACACCTAC
CTGTTCTCACTCTATATCTACGATACCGCCTTTAAGTACTTCGACATGGGCTATGGCGCCGCGCTGGCGTGGGTGCTGTT
CCTCGTCGTGGCGGTCTTTGCGTCGATCGCCTTTAAGTCATCGAAATACTGGGTCTTCTACTCCGCCGATAAGGGAGGCA
AAAATGGCTGA

Upstream 100 bases:

>100_bases
CAGAGGAAGCGTTCAGACATTTTTGCGTTGTCAGGCGTAAAAGGCCGACAGCGCGGCGTCACCGGATCCGTATTACAACT
CGTAAGCCAGGTAGGTATGT

Downstream 100 bases:

>100_bases
TATTCAACAGATGGCGCCGGTGATGAGCGACGCCGATCGTGAGGTCGCCCGTACGCTACGCCGGGAAAAGGTGAGCCGGG
TGGTGCGCTACGTCGTGCTG

Product: putative oligogalacturonide ABC transport system inner membrane permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDSLFWKSMGVTFAYVFLTIPLK
LAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVLWRALFAIDGLLNSFLAVFGIDAINWLGEPSLALMSVTLLR
VWQFGSAMVIFLAALQNVPQSQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY
LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG

Sequences:

>Translated_296_residues
MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDSLFWKSMGVTFAYVFLTIPLK
LAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVLWRALFAIDGLLNSFLAVFGIDAINWLGEPSLALMSVTLLR
VWQFGSAMVIFLAALQNVPQSQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY
LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG
>Mature_296_residues
MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDSLFWKSMGVTFAYVFLTIPLK
LAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVLWRALFAIDGLLNSFLAVFGIDAINWLGEPSLALMSVTLLR
VWQFGSAMVIFLAALQNVPQSQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY
LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=273, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1789861, Length=273, Percent_Identity=31.1355311355311, Blast_Score=82, Evalue=5e-17,
Organism=Escherichia coli, GI1790465, Length=260, Percent_Identity=26.5384615384615, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33259; Mature: 33259

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS00589 PTS_HPR_SER ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCEEEEECCH
LFWKSMGVTFAYVFLTIPLKLAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WRALFAIDGLLNSFLAVFGIDAINWLGEPSLALMSVTLLRVWQFGSAMVIFLAALQNVPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
SQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNENKLLGLAWISPYIIGLIVFTAFPFVSSFFLSFTEYDLMSPPVFNGIENYRYMLTEDS
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHCEEEEECCH
LFWKSMGVTFAYVFLTIPLKLAFALGIAFVLNFKLRGIGFFRTAYYIPSILGSSVAIAVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
WRALFAIDGLLNSFLAVFGIDAINWLGEPSLALMSVTLLRVWQFGSAMVIFLAALQNVPQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCH
SQYEAAMIDGASKWQMFMKVTVPLITPVIFFNFIMQTTQAFQEFTGPYVITGGGPTYYTY
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHH
LFSLYIYDTAFKYFDMGYGAALAWVLFLVVAVFASIAFKSSKYWVFYSADKGGKNG
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]