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The map label for this gene is togN [H]

Identifier: 238896365

GI number: 238896365

Start: 4346567

End: 4347469

Strand: Direct

Name: togN [H]

Synonym: KP1_4532

Alternate gene names: 238896365

Gene position: 4346567-4347469 (Clockwise)

Preceding gene: 238896364

Following gene: 238896366

Centisome position: 82.82

GC content: 57.14

Gene sequence:

>903_bases
ATGGCTGATATTCAACAGATGGCGCCGGTGATGAGCGACGCCGATCGTGAGGTCGCCCGTACGCTACGCCGGGAAAAGGT
GAGCCGGGTGGTGCGCTACGTCGTGCTGATATTCGTCGGCCTGCTGATGCTCTACCCGCTGGCGTGGATGTTCTCCGCCT
CGTTCAAGCCGAACCATGAGATCTTCACCACCCTCGGGCTGTGGCCTGCCCACGCCACCTGGGACGGGTTTATCAACGGC
TGGAAGACCGGCACCGAATACCATTTCGGCCACTATATGCTGAACACCTTTAAGTATGTGATCCCGAAAGTGGTGTTAAC
GATCATTTCCTCCACCATCGTGGCGTACGGCTTCGCACGCTTTGAGATCCCGTGGAAGAAGTTCTGGTTCGCAACGCTTA
TCACCACCATGCTGCTGCCGAGCACCGTCCTGCTGATCCCGCAGTACCTGATGTTCCGCGAAATGGGGATGCTGAACAGC
TATCTGCCGCTGTACCTGCCGCTGGCCTTCGCCACCCAGGGATTCTTCGTCTTCATGCTGATCCAGTTTCTGCGCGGCGT
GCCGCGCGATATGGAAGAGGCGGCGCAGATCGACGGCTGCAACTCCATCCAGGTGCTGTGGTATGTGGTGGTGCCGATCC
TCAAGCCGGCCATTATCTCGGTGGCGCTGTTCCAGTTTATGTGGTCGATGAACGACTTTATCGGTCCGCTGATCTACGTC
TACAGCGTCGATAAGTATCCCATCGCGCTGGCGCTAAAAATGTCTATCGACGTCACGGAAGGCGCGCCGTGGAACGAAAT
TCTGGCAATGGCGAGCATCTCCATTCTGCCGTCCATCATTGTCTTCTTCCTGGCTCAACGCTACTTCGTGCAGGGCGTGA
CCAGCAGCGGAATCAAAGGTTAA

Upstream 100 bases:

>100_bases
CTGGCGTGGGTGCTGTTCCTCGTCGTGGCGGTCTTTGCGTCGATCGCCTTTAAGTCATCGAAATACTGGGTCTTCTACTC
CGCCGATAAGGGAGGCAAAA

Downstream 100 bases:

>100_bases
GAGGGAAATATCATGGCTGAAGTAATTTTCAACAAACTGGAAAAAGTTTACTCCAACGGGTTTAAAGCGGTGCATGGTAT
CGACCTGAAGATTGCCGATG

Product: putative oligogalacturonide ABC transport system inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MADIQQMAPVMSDADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHEIFTTLGLWPAHATWDGFING
WKTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFARFEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNS
YLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV
YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG

Sequences:

>Translated_300_residues
MADIQQMAPVMSDADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHEIFTTLGLWPAHATWDGFING
WKTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFARFEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNS
YLPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV
YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG
>Mature_299_residues
ADIQQMAPVMSDADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHEIFTTLGLWPAHATWDGFINGW
KTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFARFEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSY
LPLYLPLAFATQGFFVFMLIQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYVY
SVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=272, Percent_Identity=25, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1787571, Length=279, Percent_Identity=23.6559139784946, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1790464, Length=279, Percent_Identity=24.3727598566308, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34287; Mature: 34156

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADIQQMAPVMSDADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHE
CCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IFTTLGLWPAHATWDGFINGWKTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFAR
HHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSYLPLYLPLAFATQGFFVFML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV
HHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG
EECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ADIQQMAPVMSDADREVARTLRREKVSRVVRYVVLIFVGLLMLYPLAWMFSASFKPNHE
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
IFTTLGLWPAHATWDGFINGWKTGTEYHFGHYMLNTFKYVIPKVVLTIISSTIVAYGFAR
HHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FEIPWKKFWFATLITTMLLPSTVLLIPQYLMFREMGMLNSYLPLYLPLAFATQGFFVFML
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQFLRGVPRDMEEAAQIDGCNSIQVLWYVVVPILKPAIISVALFQFMWSMNDFIGPLIYV
HHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
YSVDKYPIALALKMSIDVTEGAPWNEILAMASISILPSIIVFFLAQRYFVQGVTSSGIKG
EECCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]