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The map label for this gene is ppdA [H]

Identifier: 238896341

GI number: 238896341

Start: 4322125

End: 4322592

Strand: Reverse

Name: ppdA [H]

Synonym: KP1_4504

Alternate gene names: 238896341

Gene position: 4322592-4322125 (Counterclockwise)

Preceding gene: 238896342

Following gene: 238896340

Centisome position: 82.36

GC content: 64.53

Gene sequence:

>468_bases
ATGAACAGAGAACATGGCTACACCCTGATGGAAACCCTGGTAACGCTGACACTGATGATGATCCTCAGCGTCGGCGGCCT
GTACGGCTGGCAGCGCTGGCAGCAGCAGCAACGACTGTGGCAAACCGCCGTCCAGGTGCGGGATTTTCTGCTCTTTCTGC
GCGATGACGCCAACGCCTACAACCGGGACCGCGTGCTTCGCGTCGGCCAGGACGAAGTGGGCTGGTGTCTGAGCGCGGAT
GGGGAGGGGCCTGACTGCGCCTCGGGGACATCCTTCACGCTGCGCCCGCGCTGGCCGGGGATCACGCTGGCTGGCGTTAC
GCCTGGTCTGGGGTTTTATGGTCTGCGCAGCACCGCCTGGGCGGGGAATCTGCGGCTGCAGAGCGCGGCCGGCAGCTGGA
GCATTGTGATCTCACACTGGGGGCGGATTCGTTTATGCCGCAGCGACAGCGCAGGAGGGTGTCAGTGA

Upstream 100 bases:

>100_bases
TGTTCTTCTGTCGAGTATGCAAAGCTTTTTTGCGTATCTGGCCGGGAAAGCTATTTTCCGTCGTCGCGCCAGGGCCAATC
GCCGCGGCATACTCGACGCC

Downstream 100 bases:

>100_bases
GCCGCCGCGGATTTTCCCTGGCGGAGGCGCTTATCGCCATGGCCATCGGCTCGCTGCTGCTGATGGGGGCCTGCCGCTTT
CTGCCTGCCCTGCAGCGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNREHGYTLMETLVTLTLMMILSVGGLYGWQRWQQQQRLWQTAVQVRDFLLFLRDDANAYNRDRVLRVGQDEVGWCLSAD
GEGPDCASGTSFTLRPRWPGITLAGVTPGLGFYGLRSTAWAGNLRLQSAAGSWSIVISHWGRIRLCRSDSAGGCQ

Sequences:

>Translated_155_residues
MNREHGYTLMETLVTLTLMMILSVGGLYGWQRWQQQQRLWQTAVQVRDFLLFLRDDANAYNRDRVLRVGQDEVGWCLSAD
GEGPDCASGTSFTLRPRWPGITLAGVTPGLGFYGLRSTAWAGNLRLQSAAGSWSIVISHWGRIRLCRSDSAGGCQ
>Mature_155_residues
MNREHGYTLMETLVTLTLMMILSVGGLYGWQRWQQQQRLWQTAVQVRDFLLFLRDDANAYNRDRVLRVGQDEVGWCLSAD
GEGPDCASGTSFTLRPRWPGITLAGVTPGLGFYGLRSTAWAGNLRLQSAAGSWSIVISHWGRIRLCRSDSAGGCQ

Specific function: Not yet known [H]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789190, Length=155, Percent_Identity=49.0322580645161, Blast_Score=169, Evalue=6e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012902
- InterPro:   IPR001120 [H]

Pfam domain/function: PF07963 N_methyl [H]

EC number: NA

Molecular weight: Translated: 17310; Mature: 17310

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNREHGYTLMETLVTLTLMMILSVGGLYGWQRWQQQQRLWQTAVQVRDFLLFLRDDANAY
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NRDRVLRVGQDEVGWCLSADGEGPDCASGTSFTLRPRWPGITLAGVTPGLGFYGLRSTAW
CCCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCE
AGNLRLQSAAGSWSIVISHWGRIRLCRSDSAGGCQ
ECCEEEECCCCCEEEEEECCCEEEEEECCCCCCCC
>Mature Secondary Structure
MNREHGYTLMETLVTLTLMMILSVGGLYGWQRWQQQQRLWQTAVQVRDFLLFLRDDANAY
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NRDRVLRVGQDEVGWCLSADGEGPDCASGTSFTLRPRWPGITLAGVTPGLGFYGLRSTAW
CCCCEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCE
AGNLRLQSAAGSWSIVISHWGRIRLCRSDSAGGCQ
ECCEEEECCCCCEEEEEECCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3520484; 9278503; 7934814 [H]